ClCG07G015080 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G015080
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr07: 31523689 .. 31525660 (-)
RNA-Seq Expression	ClCG07G015080
Synteny	ClCG07G015080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAATAAACAAAATTAAAAATGAAAATTTTTTAAATACAAAAACGAAAATCAACATTACTATCCAGACAAACTGAGATATACCGAAGTCGCAACGCCGAGCGCGTACAGTGCAACCACAGTTCCAACCACATCCTTTCCGGACCGAGTCACGGCGCCGATTCCGGCGATTCCGGCAATTCCCACCGGAACTCGAAGCATCACTTTTTTTCCGACGTTCTTCGCCACAGCCTCTGAGAATAGTTCGATCGCCCAATGCTTGAAGCGGATCGGGCCTAGGGTTTCGTCTTCATTGTTCGAGTCATCGCGATTGACGGCTCGGAGCGCTGAGTCTACCTAGAGGCGAGTCGGGGGAGAGGGAAGCCAGTTGGCGATTAGTGGATGCGGCCGGACGACGGTGAGGAGGTGGTGAAGGTGGTCGGCGGCGGCGCAGAGTTGGTAGGGGCAAACGCCGTCGTATGCGTGCTGCGTTAGGGCAAGGCAGTGAGAGAAGGTTGAATTGCAGGCTGAGTCAAATTCGGGCGAGTTTGTAAGTGAGTTTCTGACTCGTTTTGAGGCTGAGATTCCCATTATCCTTCTTCCTCGCTCTCTCCTCCCCACAACTAGTTCTAGTTTTTAATGACACTTGAATAAATGTCTGAAAACAAAAGCCTATTATATTTATTCATAGTCTTCATATAGATTATATAAAATACCTACACTTTGTTTGAAAATATCTCAACTTTAAAAAATTTCCAATAAACTTCCAAAAAAGGTTTAAGAATCACCCATACAATTAGACTTCTGCTACTCGAGCGTAGGGCCTCCATTCCACCTTCACTGAACTGAGTTTCTCGCAAAAGATCGGTTGAGATGAAATCTACTCTAATGGGTGGTCTTCAACTCCATTTTCCTCAATTGGGTCTTCGCCAAAACCTCACGAACTCAAGCCTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGTGGCCTCAGAAAGGGCTTGAGGAAGCCCTTAGGGAGGTCAAGGGTGCCCTCCACTGAGTCTATTCAAGCAGTTCAGTCCCTCAAGCTTGCTAAATCCACCTCCAAAATGGAAGACGTTATCAATACCAAGCTCAGCCGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGGCAAAATGAGCTGGAATTATCGCTTCAGGTATTGAATACTCCTGTTTATCTTCTGCAAATATTGTAAAAGCTAGATATGTTACCCTTTAACTCTCTTAGTGGCTGGCTTTAGTTATAATTATTTCCTAAGTTCGAGAGTTTTAACTCAACAGCAATGGTTGCTCAGAATTCAGGGTTTAGGGTTCAATTACAACGATGACTAAAAGCTTGATGGTGTGATTGTAACTGTGTTTTTCCATTTTCTTTCGCTATCATTTATTTTGTTTTAGTGTTTTTCTTTACAAGAACTTCAATTATTTGATATTCTGATCTAAAAAGTTTACTGGAATCATACATCTGATTCTCTACTGCAGCCTATAGCATTTCTGTCACTTCAAATTTTATTTCATCTTAACTGAATTCAGGCTTTAGGTCTTCAAATTTATGCAAAAAGAAGAATGGTACGAGCCAGATATAAGGTTATACCATGGGATGATTATGATGATGGGAAAGAACAAAATGATTGAAATGGCTGAAAAGGTCTTCCATGAGTTAAAAAAGGATGGGTTAGAAGCAGACACAAGAGCGTTCAATGAGATGATGGGAGCATATTTGCAAGTGGACATGGTCGAAAGAGCAGTTGAGACATATGAATTAATGAAAGCATCAGGTTGTATTCCAGATAAACTGACTTTCAAGATCTTGATCAAGAATCTCGAGAAATTTAGAGAAGAATTTGCTGTAGTGGTGAAGAAAGAATGTAATGAGTACTTGGATTCCCCTGAGAAATTCCTCAACGATGTCGAACAGAAACTGATGACGACAGGTCGAATTCTTTAA

mRNA sequence

CGAAATAAACAAAATTAAAAATGAAAATTTTTTAAATACAAAAACGAAAATCAACATTACTATCCAGACAAACTGAGATATACCGAAGTCGCAACGCCGAGCGCGTACAGTGCAACCACAGTTCCAACCACATCCTTTCCGGACCGAGTCACGGCGCCGATTCCGGCGATTCCGGCAATTCCCACCGGAACTCGAAGCATCACTTTTTTTCCGACGTTCTTCGCCACAGCCTCTGAGAATAGTTCGATCGCCCAATGCTTGAAGCGGATCGGGCCTAGGGTTTCGTCTTCATTGTTCGAGTCATCGCGATTGACGGCTCGGAGCGCTGAGTCTACCTAGAGGCGAGTCGGGGGAGAGGGAAGCCAGTTGGCGATTAGTGGATGCGGCCGGACGACGGTGAGGAGGTGGTGAAGGTGGTCGGCGGCGGCGCAGAGTTGGTAGGGGCAAACGCCGTCGTATGCGTGCTGCGTTAGGGCAAGGCAGTGAGAGAAGGTTGAATTGCAGGCTGAGTCAAATTCGGGCGAGTTTGTAAGTGAGTTTCTGACTCGTTTTGAGGCTGAGATTCCCATTATCCTTCTTCCTCGCTCTCTCCTCCCCACAACTAGTTCTAGTTTTTAATGACACTTGAATAAATGTCTGAAAACAAAAGCCTATTATATTTATTCATAGTCTTCATATAGATTATATAAAATACCTACACTTTGTTTGAAAATATCTCAACTTTAAAAAATTTCCAATAAACTTCCAAAAAAGGTTTAAGAATCACCCATACAATTAGACTTCTGCTACTCGAGCGTAGGGCCTCCATTCCACCTTCACTGAACTGAGTTTCTCGCAAAAGATCGGTTGAGATGAAATCTACTCTAATGGGTGGTCTTCAACTCCATTTTCCTCAATTGGGTCTTCGCCAAAACCTCACGAACTCAAGCCTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGTGGCCTCAGAAAGGGCTTGAGGAAGCCCTTAGGGAGGTCAAGGGTGCCCTCCACTGAGTCTATTCAAGCAGTTCAGTCCCTCAAGCTTGCTAAATCCACCTCCAAAATGGAAGACGTTATCAATACCAAGCTCAGCCGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGGCAAAATGAGCTGGAATTATCGCTTCAGGTCTTCAAATTTATGCAAAAAGAAGAATGGTACGAGCCAGATATAAGGTTATACCATGGGATGATTATGATGATGGGAAAGAACAAAATGATTGAAATGGCTGAAAAGGTCTTCCATGAGTTAAAAAAGGATGGGTTAGAAGCAGACACAAGAGCGTTCAATGAGATGATGGGAGCATATTTGCAAGTGGACATGGTCGAAAGAGCAGTTGAGACATATGAATTAATGAAAGCATCAGGTTGTATTCCAGATAAACTGACTTTCAAGATCTTGATCAAGAATCTCGAGAAATTTAGAGAAGAATTTGCTGTAGTGGTGAAGAAAGAATGTAATGAGTACTTGGATTCCCCTGAGAAATTCCTCAACGATGTCGAACAGAAACTGATGACGACAGGTCGAATTCTTTAA

Coding sequence (CDS)

ATGAAATCTACTCTAATGGGTGGTCTTCAACTCCATTTTCCTCAATTGGGTCTTCGCCAAAACCTCACGAACTCAAGCCTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGTGGCCTCAGAAAGGGCTTGAGGAAGCCCTTAGGGAGGTCAAGGGTGCCCTCCACTGAGTCTATTCAAGCAGTTCAGTCCCTCAAGCTTGCTAAATCCACCTCCAAAATGGAAGACGTTATCAATACCAAGCTCAGCCGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGGCAAAATGAGCTGGAATTATCGCTTCAGGTCTTCAAATTTATGCAAAAAGAAGAATGGTACGAGCCAGATATAAGGTTATACCATGGGATGATTATGATGATGGGAAAGAACAAAATGATTGAAATGGCTGAAAAGGTCTTCCATGAGTTAAAAAAGGATGGGTTAGAAGCAGACACAAGAGCGTTCAATGAGATGATGGGAGCATATTTGCAAGTGGACATGGTCGAAAGAGCAGTTGAGACATATGAATTAATGAAAGCATCAGGTTGTATTCCAGATAAACTGACTTTCAAGATCTTGATCAAGAATCTCGAGAAATTTAGAGAAGAATTTGCTGTAGTGGTGAAGAAAGAATGTAATGAGTACTTGGATTCCCCTGAGAAATTCCTCAACGATGTCGAACAGAAACTGATGACGACAGGTCGAATTCTTTAA

Protein sequence

MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMTTGRIL

Homology

[Close]

BLAST of ClCG07G015080 vs. NCBI nr
Match: XP_038878176.1 (pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >XP_038878177.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida])

HSP 1 Score: 437.2 bits (1123), Expect = 9.4e-119
Identity = 221/245 (90.20%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQ HFPQLGLRQ+LTN SLHCCTAAPPPNIICGLRKGLRKPLGRSRVPS E+
Sbjct: 1   MKSTLMGSLQFHFPQLGLRQDLTNPSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSIEA 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAKSTSKMEDVIN+KLSRLLKADLFDALTELQRQNELELSLQVFKF+Q EEW
Sbjct: 61  IQAVQSLKLAKSTSKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFIQNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+RLYHGMI+M GKNKMIEMAE++FH+LKKDGLE D RAFNEMMGAYLQVDMVERAV
Sbjct: 121 YEPDLRLYHGMILMTGKNKMIEMAEEIFHKLKKDGLEPDIRAFNEMMGAYLQVDMVERAV 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT 240
           ETYELMKASGC PDKLTFKILIKNLEKFREEFA VVKKECN YLDSPEKFLNDVEQK   
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLEKFREEFAAVVKKECNVYLDSPEKFLNDVEQKSTA 240

Query: 241 TGRIL 246
            GRIL
Sbjct: 241 KGRIL 245

[Close]

BLAST of ClCG07G015080 vs. NCBI nr
Match: KAA0044536.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 427.2 bits (1097), Expect = 9.8e-116
Identity = 213/242 (88.02%), Postives = 227/242 (93.80%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLHFPQLGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+
Sbjct: 1   MKSTLMGRLQLHFPQLGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQ EEW
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT 240
           +TY LM ASGC PDKLTFKILIKNLEKF+EEFA+VVKK+C+EYLD+P+KF ND  QKL T
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCHEYLDNPQKFFNDEGQKLTT 240

Query: 241 TG 243
            G
Sbjct: 241 KG 242

[Close]

BLAST of ClCG07G015080 vs. NCBI nr
Match: XP_008454079.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Cucumis melo] >TYK17047.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 424.9 bits (1091), Expect = 4.8e-115
Identity = 212/242 (87.60%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLHFP+LGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+
Sbjct: 1   MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQ EEW
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT 240
           +TY LM ASGC PDKLTFKILIKNLEKF+EEFA+VVKK+C EYLD+P+KF ND  QKL T
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFNDEGQKLTT 240

Query: 241 TG 243
            G
Sbjct: 241 KG 242

[Close]

BLAST of ClCG07G015080 vs. NCBI nr
Match: XP_023527118.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 214/239 (89.54%), Postives = 224/239 (93.72%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLHFPQLG RQNLTN +LHCCTA PPPNIICGLRKG RKPLG+SRVPSTES
Sbjct: 1   MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAKS SKMEDVIN+KLSRLLKADLFDAL ELQRQNELELSLQVFKFM+ EEW
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+ LYH MI MMGKNKMIEMAE+VFHELK+DGLE DTRAFNEMMGAY+QVDMVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYMQVDMVERAV 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM 240
           ETYELMKASGCIPDKLTFKILIKNLE+FREEFA VVKKEC E+LDSPEKFL DVEQKLM
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLM 239

[Close]

BLAST of ClCG07G015080 vs. NCBI nr
Match: XP_022980054.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima])

HSP 1 Score: 417.5 bits (1072), Expect = 7.7e-113
Identity = 211/239 (88.28%), Postives = 221/239 (92.47%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLH PQLG RQNLTN +LHCCTA PPPNIICGLRKG RKPLG+SRVPSTES
Sbjct: 1   MKSTLMGRLQLHLPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAKS SKMEDVIN+KLSRLLKADLFDAL ELQRQNELELSLQVFKFM+ EEW
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+ LYH MI MMGKNKMIEMAE+VFH+ K+DGLE DTRAFNEMMGAYLQVDMVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHDFKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM 240
           ETYELMKASGC PDKLTFKILIKNLE+FREEFA VVKKEC E+LDSPEKFL DVEQKLM
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLM 239

[Close]

BLAST of ClCG07G015080 vs. ExPASy Swiss-Prot
Match: Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-18
Identity = 57/192 (29.69%), Postives = 107/192 (55.73%), Query Frame = 0


Query: 57  STESIQAVQSLKLAKSTS-KMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFM 116
           S E + A + LK  ++ S +++  I + +SRLLK+DL   L E QRQN++ L +++++ +
Sbjct: 2   SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61

Query: 117 QKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDM 176
           ++E WY PD+  Y  M+MM+ +NK ++  +KV+ +LKK+ +  D   F +++  +L  ++
Sbjct: 62  RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121

Query: 177 VERAVETYELMKASGCIPDKLTFKILIKNL-------EKFREEFAVVVKKECNEYLDSPE 236
              A+  Y  M+ S   P  L F++++K L       EK +++F  +         D PE
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMI--VYDPPE 181

Query: 237 KFLNDVEQKLMT 241
               D +++  T
Sbjct: 182 DICEDSDEEART 191

[Close]

BLAST of ClCG07G015080 vs. ExPASy Swiss-Prot
Match: Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.8e-18
Identity = 52/161 (32.30%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 47  RKPLGR-SRVPSTESIQAVQSLK-LAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNE 106
           R PL R  ++   E++  +  LK L +   K++  I T + RLLK D+   + EL+RQ E
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122

Query: 107 LELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFN 166
             L++++F+ +QK+EWY+PD+ +Y  +I+ + K+K ++ A  ++ ++KK+ L  D++ + 
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYT 182

Query: 167 EMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL 206
           E++  +L+      A+  YE M  S   P++L F++L+K L
Sbjct: 183 EVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223

[Close]

BLAST of ClCG07G015080 vs. ExPASy Swiss-Prot
Match: Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.8e-11
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 37  NIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDAL 96
           +I CG R   R PL + R+ STE+IQ++QSLK A  T     +    L RL+K+DL   L
Sbjct: 30  SIRCGPRDN-RGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89

Query: 97  TELQRQNELELSLQVFKFMQKEEWYEP-DIRLYHGMIMMMGKNKMIEMAEKVFHELKKDG 156
            EL RQ+   L++ V   ++ E  Y P D+ LY  ++  + +NK  +  +++  E+    
Sbjct: 90  RELLRQDYCTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGID 149

Query: 157 LEADTRAFNEMMGAYLQVDMVERAVETYELMKASG 191
             +D +A  +++ A +  +  E  V  Y LM+ SG
Sbjct: 150 QRSDDKALAKLIRAVVGAERRESVVRVYTLMRESG 181

[Close]

BLAST of ClCG07G015080 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 9.8e-10
Identity = 42/153 (27.45%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 53  SRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVF 112
           +++ S ++I  +   +  KS  + +      L R +   L + +T L+     E ++QVF
Sbjct: 82  TKIASRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALR----WESAIQVF 141

Query: 113 KFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQ 172
           + ++++ WY+P++ +Y  +I+M+GK K  E A ++F E+  +G   +   +  ++ AY +
Sbjct: 142 ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 201

Query: 173 VDMVERAVETYELMKAS-GCIPDKLTFKILIKN 205
               + A    E MK+S  C PD  T+ ILIK+
Sbjct: 202 SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230

[Close]

BLAST of ClCG07G015080 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-09
Identity = 48/182 (26.37%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 57  STESIQAVQSL--KLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKF 116
           + E+ + V+SL  + A    ++  V++  +  +     F    EL R++     L VF++
Sbjct: 54  AAEAAELVRSLLRRTAGGKERLVPVLDRHVRVVRTEHCFLLFEELGRRDAWLQCLDVFRW 113

Query: 117 MQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYL--- 176
           MQK+ WY  D  +Y  +I +MG+   I MA  +F +++  G + DT  +N ++GA+L   
Sbjct: 114 MQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSR 173

Query: 177 -QVDMVERAVETYELMKA-SGCIPDKLTFKILIKNLEKFREEFAV-VVKKECNEYLDSPE 231
            +   + +A+  +E MK    C P  +T+ IL++   +  +   V ++ K+ +E + SP+
Sbjct: 174 DKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPD 233

[Close]

BLAST of ClCG07G015080 vs. ExPASy TrEMBL
Match: A0A5A7TQZ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002830 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.7e-116
Identity = 213/242 (88.02%), Postives = 227/242 (93.80%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLHFPQLGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+
Sbjct: 1   MKSTLMGRLQLHFPQLGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQ EEW
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT 240
           +TY LM ASGC PDKLTFKILIKNLEKF+EEFA+VVKK+C+EYLD+P+KF ND  QKL T
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCHEYLDNPQKFFNDEGQKLTT 240

Query: 241 TG 243
            G
Sbjct: 241 KG 242

[Close]

BLAST of ClCG07G015080 vs. ExPASy TrEMBL
Match: A0A5D3CZ95 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001960 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 212/242 (87.60%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLHFP+LGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+
Sbjct: 1   MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQ EEW
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT 240
           +TY LM ASGC PDKLTFKILIKNLEKF+EEFA+VVKK+C EYLD+P+KF ND  QKL T
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFNDEGQKLTT 240

Query: 241 TG 243
            G
Sbjct: 241 KG 242

[Close]

BLAST of ClCG07G015080 vs. ExPASy TrEMBL
Match: A0A1S3BX97 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=3656 GN=LOC103494600 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 212/242 (87.60%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLHFP+LGLRQNLTN SLHCCTAAPPPNIICGLRKGL+KPLGRSRVPS E+
Sbjct: 1   MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAK TSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQ EEW
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+RLYHGMIMMMGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT 240
           +TY LM ASGC PDKLTFKILIKNLEKF+EEFA+VVKK+C EYLD+P+KF ND  QKL T
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFNDEGQKLTT 240

Query: 241 TG 243
            G
Sbjct: 241 KG 242

[Close]

BLAST of ClCG07G015080 vs. ExPASy TrEMBL
Match: A0A6J1IY98 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima OX=3661 GN=LOC111479570 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.7e-113
Identity = 211/239 (88.28%), Postives = 221/239 (92.47%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTLMG LQLH PQLG RQNLTN +LHCCTA PPPNIICGLRKG RKPLG+SRVPSTES
Sbjct: 1   MKSTLMGRLQLHLPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAKS SKMEDVIN+KLSRLLKADLFDAL ELQRQNELELSLQVFKFM+ EEW
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           YEPD+ LYH MI MMGKNKMIEMAE+VFH+ K+DGLE DTRAFNEMMGAYLQVDMVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHDFKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLM 240
           ETYELMKASGC PDKLTFKILIKNLE+FREEFA VVKKEC E+LDSPEKFL DVEQKLM
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLM 239

[Close]

BLAST of ClCG07G015080 vs. ExPASy TrEMBL
Match: A0A0A0KU23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011020 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110
Identity = 209/245 (85.31%), Postives = 224/245 (91.43%), Query Frame = 0


Query: 1   MKSTLMGGLQLHFPQLGLRQNLTNSSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTES 60
           MKSTL+G LQLHF QLGLRQNLTN SL C TAAPPPNIICGLRKG  +PLG SRVPS E+
Sbjct: 1   MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60

Query: 61  IQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQKEEW 120
           IQAVQSLKLAKSTSKMEDVINTKL RLLKADLFDAL+ELQRQNELELSLQVFKFMQ EEW
Sbjct: 61  IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120

Query: 121 YEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDMVERAV 180
           +EPD+RLYHGMIM+MGKNKMIEMAE+VFH+L+KDGLE DTRAFNEMMGAYLQVDM+ERAV
Sbjct: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180

Query: 181 ETYELMKASGCIPDKLTFKILIKNLEKFREEFAVVVKKECNEYLDSPEKFLNDVEQKLMT 240
           ETY LM ASGC PD+LTFKILIKNLEKFREEFAVVVKK+CNEYLD+P+KF ND  QKL T
Sbjct: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240

Query: 241 TGRIL 246
             RIL
Sbjct: 241 KVRIL 245

[Close]

BLAST of ClCG07G015080 vs. TAIR 10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 70/208 (33.65%), Postives = 118/208 (56.73%), Query Frame = 0


Query: 47  RKPLGRSRVPSTESIQAVQSLKLA----------------KSTSKMEDVINTKLSRLLKA 106
           RKPL R R+ S E+IQAVQ+LK A                 S++ ++ VI +K  RLLK 
Sbjct: 496 RKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRRLLKF 555

Query: 107 DLFDALTELQRQNELELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHE 166
           D+   L EL RQNE  L+L+VF+ ++KE WY+P +R+Y  MI +M  N ++E    ++  
Sbjct: 556 DMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNYLYSA 615

Query: 167 LKKD-GLEADTRAFNEMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNLEKFR 226
           +K + GL A+   FN ++   L   + +  ++ Y  M++ G  PD+ +F++L+  LE   
Sbjct: 616 MKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRVLVLGLESNG 675

Query: 227 E-EFAVVVKKECNEYLDSPEKFLNDVEQ 237
           E   + +V+++ +EY     +F+ + E+
Sbjct: 676 EMGLSAIVRQDAHEYYGESLEFIEEDEE 703

[Close]

BLAST of ClCG07G015080 vs. TAIR 10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-19
Identity = 57/192 (29.69%), Postives = 107/192 (55.73%), Query Frame = 0


Query: 57  STESIQAVQSLKLAKSTS-KMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFM 116
           S E + A + LK  ++ S +++  I + +SRLLK+DL   L E QRQN++ L +++++ +
Sbjct: 2   SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61

Query: 117 QKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQVDM 176
           ++E WY PD+  Y  M+MM+ +NK ++  +KV+ +LKK+ +  D   F +++  +L  ++
Sbjct: 62  RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121

Query: 177 VERAVETYELMKASGCIPDKLTFKILIKNL-------EKFREEFAVVVKKECNEYLDSPE 236
              A+  Y  M+ S   P  L F++++K L       EK +++F  +         D PE
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMI--VYDPPE 181

Query: 237 KFLNDVEQKLMT 241
               D +++  T
Sbjct: 182 DICEDSDEEART 191

[Close]

BLAST of ClCG07G015080 vs. TAIR 10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 6.9e-19
Identity = 52/161 (32.30%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 47  RKPLGR-SRVPSTESIQAVQSLK-LAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNE 106
           R PL R  ++   E++  +  LK L +   K++  I T + RLLK D+   + EL+RQ E
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122

Query: 107 LELSLQVFKFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFN 166
             L++++F+ +QK+EWY+PD+ +Y  +I+ + K+K ++ A  ++ ++KK+ L  D++ + 
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYT 182

Query: 167 EMMGAYLQVDMVERAVETYELMKASGCIPDKLTFKILIKNL 206
           E++  +L+      A+  YE M  S   P++L F++L+K L
Sbjct: 183 EVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223

[Close]

BLAST of ClCG07G015080 vs. TAIR 10
Match: AT3G27750.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 4.8e-12
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 37  NIICGLRKGLRKPLGRSRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDAL 96
           +I CG R   R PL + R+ STE+IQ++QSLK A  T     +    L RL+K+DL   L
Sbjct: 30  SIRCGPRDN-RGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89

Query: 97  TELQRQNELELSLQVFKFMQKEEWYEP-DIRLYHGMIMMMGKNKMIEMAEKVFHELKKDG 156
            EL RQ+   L++ V   ++ E  Y P D+ LY  ++  + +NK  +  +++  E+    
Sbjct: 90  RELLRQDYCTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGID 149

Query: 157 LEADTRAFNEMMGAYLQVDMVERAVETYELMKASG 191
             +D +A  +++ A +  +  E  V  Y LM+ SG
Sbjct: 150 QRSDDKALAKLIRAVVGAERRESVVRVYTLMRESG 181

[Close]

BLAST of ClCG07G015080 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-11
Identity = 42/153 (27.45%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 53  SRVPSTESIQAVQSLKLAKSTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVF 112
           +++ S ++I  +   +  KS  + +      L R +   L + +T L+     E ++QVF
Sbjct: 82  TKIASRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALR----WESAIQVF 141

Query: 113 KFMQKEEWYEPDIRLYHGMIMMMGKNKMIEMAEKVFHELKKDGLEADTRAFNEMMGAYLQ 172
           + ++++ WY+P++ +Y  +I+M+GK K  E A ++F E+  +G   +   +  ++ AY +
Sbjct: 142 ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 201

Query: 173 VDMVERAVETYELMKAS-GCIPDKLTFKILIKN 205
               + A    E MK+S  C PD  T+ ILIK+
Sbjct: 202 SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230

The following BLAST results are available for this feature:

BLAST of ClCG07G015080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878176.1	9.4e-119	90.20	pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >...	[more]
KAA0044536.1	9.8e-116	88.02	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008454079.1	4.8e-115	87.60	PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Cucumis m...	[more]
XP_023527118.1	1.1e-114	89.54	pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp...	[more]
XP_022980054.1	7.7e-113	88.28	pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima]	[more]

BLAST of ClCG07G015080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PFH7	2.6e-18	29.69	Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX...	[more]
Q9STF9	9.8e-18	32.30	Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9LVW6	6.8e-11	32.90	Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T...	[more]
Q9FKC3	9.8e-10	27.45	Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop...	[more]
A7LN87	3.7e-09	26.37	Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4...	[more]

BLAST of ClCG07G015080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQZ8	4.7e-116	88.02	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CZ95	2.3e-115	87.60	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BX97	2.3e-115	87.60	pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=36...	[more]
A0A6J1IY98	3.7e-113	88.28	pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima O...	[more]
A0A0A0KU23	1.3e-110	85.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011020 PE=4 SV=1	[more]

BLAST of ClCG07G015080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09320.1	1.1e-24	33.65	Vacuolar sorting protein 9 (VPS9) domain	[more]
AT1G62350.1	1.8e-19	29.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G46870.1	6.9e-19	32.30	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G27750.1	4.8e-12	32.90	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G48730.1	6.9e-11	27.45	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 162..194 e-value: 2.1E-6 score: 25.6 coord: 127..159 e-value: 2.2E-5 score: 22.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 128..156 e-value: 8.1E-4 score: 19.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 159..205 e-value: 7.1E-10 score: 38.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 124..158 score: 9.404853
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 159..193 score: 10.654441
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 56..224 e-value: 2.0E-43 score: 150.2
IPR044190	Protein THYLAKOID ASSEMBLY 8-like	PANTHER	PTHR47594	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 10..237
None	No IPR available	PANTHER	PTHR47594:SF5	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 10..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G015080.1	ClCG07G015080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding