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ClCG07G014610 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTTCGCTAATCGCTTCTCAAGCTCTCCCTCTTCGACGGCCCCTCCTCCCGCCGAAGCTCCACCGCCCACTACCTTCGCCGCTCCTCCTCCCTTTCTGCACTGTCAAGTCTCCAAATCTTCGCCTTAGGGTTTTAGCTTCCTCATCGCCTTCCTCTTATTCACCAAAACTTTCCCATCAATCACAAGAATTGCCGATTGCATCGCTCCTTACCGGCCCGACCCGGGTACTTGCTACCGTTCTCTCTGTTTCCCTAGCATTTTCGACCTTAATTGTTAAACTGGTTCAGAATGTTTGGCCGATTTTGATTCCTCAATGTCTCGTAAATCCCTGTACTGCGCTCGGTGCCTTCCACCCGGCCGGCTCCTTGTTCTTCGCTGCTTTGCGGGATCGTCCCAGTGGATATCTCAACACGCCTTTGACGGTGGTGGCTGCAGGGCTAGCTAAGTGGCTGGATATTTACAGTGGGGTTTTGATGGTTAGGGTTTTGCTGAGTTGGTTTCCTAACATCCCTTGGGACCGGCAGCCACTCTCTGCAATTCGTGATCTCTGTGATCCGTACTTGAACCTGTTCCGGAATATAATTCCTCCAATCTTCGATACCCTGGATGTTAGCCCACTTTTGGCTTTTGCGGTTCTGGGTACACTAGGATCAATTCTGAACAACAGCAGGGGCATGTATTGAAGGAGGCTATGAGTGGATTTGGTTGGCTGGTTGGTTAGTGGCGAAATTTACGACAAGTAAGGTATAATTCAATTCATGGAAAGTTGGATTTGAGTTTAGGTTTTTGGATAATTTGTATTTTAATACCGTAAGTTGTTTTTTTTTTTTTCTTTTTTCTTTTCCTTCAGGGGCTTTGAATTTGCGAGACACGATTGTAAATTTTAGTTAAAATATTTGAATTTTGACAGCTTTTAATGAAAGCGTTTGTTCGATGAGGTGATCGCTTATGTTTATGTTAGTCTCCATTCCATACCTAGAAAAGGCTGATATATTTGAATTTGTTTGTTCTCTATAAATTGTCATCTGCTGTAGTACTTTCCAGTAGTTTTCCTACACAACCTTTTGCTTACAGCTCGTGGTATCATCTAGAAGTTGGCCCGATCATTATGTTTGCTATCAATCATACATGGGCCAAGAATATAAGGGTCGACTTTCTAAATACATTAAAACATTTTTCCTTGAGTACATAGAAAGTCATTTAAACTAACCTTAGCAATGAACTAGCTTATTTAGAACATGTTTGGATCAACTTTCTAACTACTTGAAAACACTTTTCTAAGCACTTAGAAAGTCTATGCCCTTGTACTAGAAAGCTAGAACACACAAATTCTCAAATTGAATTATATCTCAAGCTGAAGGTACTGGCACAACTACTAACAGAATTACTAAGTAAAATTTCTTCTTCTCTATTTCCTATGAATGATCCTGTTTTATTTTCACGAATGAAATTATGGATGCCAGTACAAATCTAATACTTCCCGTCTCCTGTTCTCTTACTATAGTCAAAAGTGCGCTTACCTCCTAGTACTTGTGCACAGTGAATTGATAAGTTAGAATTGATAAAGTTTTCAATTTGATCCAAAGCATATATGGCATTCAAAGTCTTCCTGTTTTTCTCCCGGGGAATGGGTTGACTGGTTTCTTCCAGAAAGACATGTATAGACATGGGATATGGCGTGATTGAATATAGTAAGTGATATTGTTTAATTTTATAATTTCTTTGAATGGACTAGTCTTTGTATGGCTGTGCAGATAGATTTGGGCATCATTTTTAGATGGTGAGAGGGTCAAAGACTCAAAACTAGAAGTACAGTTGCAAATCTTGTTTGTGTGGATGCCAGTACAACTATTATTCCACCTTTGAACGCATCTGGCATTTGATTATTAATGTGTTACAGGTCGATTCTGGCTGTACACATATTGGCATGGAGAAATATTGGGATTTCTTAATAAGCTGTTGATGAGTTGGTTGAAAATGTTGTGTGAATTTTATATATTTATATGCATGCTCTTCAGCTTCTTGAATTGAAGTTGCATTTGAGATTTCGTAAACTGTCTCCTATTAGAAATATCTTTTACTTACTGGACGGGTGGAAGATATGTGAAATAGACAGAATCCAAAACGAAACCCACTGTCTCTAGTTTTGCTTACACCTGAATCTTTATCTTCAGGTGTGGATGGATGGGGGAAATTACCCAAAATAATAATGTAGTTGGAGAACGGGCAGGTATCTTGAAGTTGAGCTTGATTGATATGGAAATTGATAGTCCCCTTTTTTTTCCCCATTACTTCACGGCTTGGATATTTTCATTGCGCAAGGGAACTACTGCTTGAAAGTTGAATTGAGCGAATTTGGGATTTTGCTTGTACTGGTCTGTTTGGTGTGTATCATTGGCAAGTAAGATGTGAAAGACCACCATACACTTTCTAATTCGGAATCCTGATTCCTAACATTGGCTTGAATTTGACTTACTTCCCAGTTTGTCTATCAATTAGAATGGAATTTTGTATGAACTTCAATTTTTTTATTAGTTAGTAAGGGAAAGTTTGGGCCAAAGAGTTGAGTTGTCAATTCACGGAACAAGGAGTTAATCAAGCATGAAATTCATGTTTTTTAATTGTGGGGTCTACAAACTCTTTAGACCAAACAAGGAGTGAAGTTCACAACTCCAACTCCTTGAACCAAACACCTTCTAGAGTTTGATTTGGTACGATAATTTTCAACCAGAGTAGAGTACTGGGACTAGTGACTATTGTTGATGACCACCTACCATTGGTGATAGTTGTCGGTCGCTCATTGTGGGTCTTCAATCTTGAGCCATAGAGTTGGTTGTCATTGGTTAGTGGTTACCAGACCAATCTTCGGAACTTGATTTCAATCAGTGATCATTGGTTTTGGTTGTTGGTCATTGATCTCTAGCCTTAGTGGTCGGTGGAGACCGACGACCATTAACCACTTTGTCGACAACCACTAACCATTTTGTCTACCACTTAAATTTGAAGTATTAGTTTATAGTCTTAAAAACATTTGTTTTATTTTTTTTGAGAAAAATCGAATAGGCTCCTATGGCTGGAATTTAAAAAGAAAAAGAAAAATAGAAAAAGAAAGTGGGTTTCTGTTTCGTTAAGGAGAAAGTAAGAATGTTGATGTTGATGATGGAGAAAGATTGATGAAGATAAAATGTAAAAGCAAATAGATATAACTTAGATTGCACCTAATTTCACTCCTTTTTTATATATTAGAAAATATATAAAAAAATTGATTTCTTTTTAAATTACGATTTGGCAAATTTTGATCAGGTGTATTTGTGCTAGATTGTGTAGGTAGAGATGTCCACAGGGTGGGGTTGGTGATGGCTTTCTCTTTCCCCATTTCATTCCCCGTCCCTATAAAATTACCTATGGGGGCGAAAATTTTCTGTGGGGAATTTGCGGGATCGGATTGCATTGTTCCTCATTTCATTCCCCATCCTTGTTAAATTGTCCTCGGTCTCCATTTTATTCTCCGTCCTTGTCAAATTACCCACGGGCAAAGATTCTCTGTGAGAAATTTGCAGAATTAGGTTCCAGTAGAAAAACTTTCTCTTGTTTGATTTTTTTTTTTAAAAAAGATTAATTAATATAAATCACTATTAAATTTTAATTAAATTGTTAATTTTTATATAATTAATTCTACGTCAACCATTAGAATTTTAATAGAAATTACTCAAAACTTTTAAATTTAAGAAGATAATGATCTATTAAATATTTCATATCCATTTTGATCATTAAACAGCGCAATTTTTTTTTCCCTCTCTCCCCCCATTCCCTGCCTTAATGGAAATATCTGCTCTGTTCGGGGCAAAGTGGACATCTCCAGGTGTAGGTCGGACTACACTCAAATTTATTATTAATGTTTTTTCTAAAAAAAATTAAGGTAAGAAAAGGGAAAGGAGAGATGAGTTGTTGACTCGGGTTGGCTCCAAAACCCAAACCATATGGAAACGTGTAGGGAAAATGGTAGGTATCGTGTCCACCCTGCAATCCTCGGGGGAACTTCACAAAAGCTAAAAGCCCCATCTTTCCAATTCAGGAGCCCAACCCCCCCTGCACTAATTTACCCAGCACTAGCAGTCAATAATGGAGAAGAAGGAGATGAAGATGAGTGCTTTTGTTTTGGTATTATGGATGATGATGCTGATTATTCTTGTTGGTGTTGGGAAGGCTAATGAGGAAGCACCAAATAACATATTTTCAGAGACAGTGAAATCAGCAGAAGCAGCTAGCCCTAATCCCAGCTCTTACTGGGAGGAACTTCGAAAGTTTGTCAATAAAGTTTACACCTATCTCTTCCCTCCCAAAATAGAGTCAGTGATCTCCATTAATTTAGTTTCTAATTTGTTTAATTTGTTAGTTTAGTTTACTAACTAAGGGGTTTGGGTTTTAGTTTCCGACCAGGAAAGCCAGTGGAAGATGGCGGAGTGAATGTGAAGGAAGCCATTACCAAGAGCTTCCAAAAGACGAAGGAAACGGTGGAGGATTCCTCCAAAGCTGCCGCTGAAACGCTTCAACAACAACAACAACAACCACATTCAGAACTGTAG ATGGCGTCTTCGCTAATCGCTTCTCAAGCTCTCCCTCTTCGACGGCCCCTCCTCCCGCCGAAGCTCCACCGCCCACTACCTTCGCCGCTCCTCCTCCCTTTCTGCACTGTCAAGTCTCCAAATCTTCGCCTTAGGGTTTTAGCTTCCTCATCGCCTTCCTCTTATTCACCAAAACTTTCCCATCAATCACAAGAATTGCCGATTGCATCGCTCCTTACCGGCCCGACCCGGGTACTTGCTACCGTTCTCTCTGTTTCCCTAGCATTTTCGACCTTAATTGTTAAACTGGTTCAGAATGTTTGGCCGATTTTGATTCCTCAATGTCTCGTAAATCCCTGTACTGCGCTCGGTGCCTTCCACCCGGCCGGCTCCTTGTTCTTCGCTGCTTTGCGGGATCGTCCCAGTGGATATCTCAACACGCCTTTGACGGTGGTGGCTGCAGGGCTAGCTAAGTGGCTGGATATTTACAGTGGGGTTTTGATGGTTAGGGTTTTGCTGAGTTGGTTTCCTAACATCCCTTGGGACCGGCAGCCACTCTCTGCAATTCGTGATCTCTGTGATCCGTACTTGAACCTGTTCCGGAATATAATTCCTCCAATCTTCGATACCCTGGATGTTAGCCCACTTTTGGCTTTTGCGGTTCTGGGTACACTAGGATCAATTCTGAACAACAGCAGGGGCATGTGTGGATGGATGGGGGAAATTACCCAAAATAATAATGTAGTTGGAGAACGGGCAGGGAACTACTGCTTGAAAGTTGAATTGAGCGAATTTGGGATTTTGCTTGTACTGGCTAATGAGGAAGCACCAAATAACATATTTTCAGAGACAGTGAAATCAGCAGAAGCAGCTAGCCCTAATCCCAGCTCTTACTGGGAGGAACTTCGAAAGTTTGTCAATAAAGTTTACACCTATCTCTTCCCTCCCAAAATAGATTTCCGACCAGGAAAGCCAGTGGAAGATGGCGGAGTGAATGTGAAGGAAGCCATTACCAAGAGCTTCCAAAAGACGAAGGAAACGGTGGAGGATTCCTCCAAAGCTGCCGCTGAAACGCTTCAACAACAACAACAACAACCACATTCAGAACTGTAG ATGGCGTCTTCGCTAATCGCTTCTCAAGCTCTCCCTCTTCGACGGCCCCTCCTCCCGCCGAAGCTCCACCGCCCACTACCTTCGCCGCTCCTCCTCCCTTTCTGCACTGTCAAGTCTCCAAATCTTCGCCTTAGGGTTTTAGCTTCCTCATCGCCTTCCTCTTATTCACCAAAACTTTCCCATCAATCACAAGAATTGCCGATTGCATCGCTCCTTACCGGCCCGACCCGGGTACTTGCTACCGTTCTCTCTGTTTCCCTAGCATTTTCGACCTTAATTGTTAAACTGGTTCAGAATGTTTGGCCGATTTTGATTCCTCAATGTCTCGTAAATCCCTGTACTGCGCTCGGTGCCTTCCACCCGGCCGGCTCCTTGTTCTTCGCTGCTTTGCGGGATCGTCCCAGTGGATATCTCAACACGCCTTTGACGGTGGTGGCTGCAGGGCTAGCTAAGTGGCTGGATATTTACAGTGGGGTTTTGATGGTTAGGGTTTTGCTGAGTTGGTTTCCTAACATCCCTTGGGACCGGCAGCCACTCTCTGCAATTCGTGATCTCTGTGATCCGTACTTGAACCTGTTCCGGAATATAATTCCTCCAATCTTCGATACCCTGGATGTTAGCCCACTTTTGGCTTTTGCGGTTCTGGGTACACTAGGATCAATTCTGAACAACAGCAGGGGCATGTGTGGATGGATGGGGGAAATTACCCAAAATAATAATGTAGTTGGAGAACGGGCAGGGAACTACTGCTTGAAAGTTGAATTGAGCGAATTTGGGATTTTGCTTGTACTGGCTAATGAGGAAGCACCAAATAACATATTTTCAGAGACAGTGAAATCAGCAGAAGCAGCTAGCCCTAATCCCAGCTCTTACTGGGAGGAACTTCGAAAGTTTGTCAATAAAGTTTACACCTATCTCTTCCCTCCCAAAATAGATTTCCGACCAGGAAAGCCAGTGGAAGATGGCGGAGTGAATGTGAAGGAAGCCATTACCAAGAGCTTCCAAAAGACGAAGGAAACGGTGGAGGATTCCTCCAAAGCTGCCGCTGAAACGCTTCAACAACAACAACAACAACCACATTCAGAACTGTAG MASSLIASQALPLRRPLLPPKLHRPLPSPLLLPFCTVKSPNLRLRVLASSSPSSYSPKLSHQSQELPIASLLTGPTRVLATVLSVSLAFSTLIVKLVQNVWPILIPQCLVNPCTALGAFHPAGSLFFAALRDRPSGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRGMCGWMGEITQNNNVVGERAGNYCLKVELSEFGILLVLANEEAPNNIFSETVKSAEAASPNPSSYWEELRKFVNKVYTYLFPPKIDFRPGKPVEDGGVNVKEAITKSFQKTKETVEDSSKAAAETLQQQQQQPHSEL Homology
BLAST of ClCG07G014610 vs. NCBI nr
Match: XP_038895892.1 (ylmG homolog protein 1-2, chloroplastic-like [Benincasa hispida] >XP_038895898.1 ylmG homolog protein 1-2, chloroplastic-like [Benincasa hispida] >XP_038895903.1 ylmG homolog protein 1-2, chloroplastic-like [Benincasa hispida] >XP_038895908.1 ylmG homolog protein 1-2, chloroplastic-like [Benincasa hispida] >XP_038895912.1 ylmG homolog protein 1-2, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 410.6 bits (1054), Expect = 1.4e-110 Identity = 211/228 (92.54%), Postives = 217/228 (95.18%), Query Frame = 0
BLAST of ClCG07G014610 vs. NCBI nr
Match: XP_023527027.1 (ylmG homolog protein 1-2, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 378.3 bits (970), Expect = 7.7e-101 Identity = 199/233 (85.41%), Postives = 207/233 (88.84%), Query Frame = 0
BLAST of ClCG07G014610 vs. NCBI nr
Match: XP_022956231.1 (ylmG homolog protein 1-2, chloroplastic [Cucurbita moschata] >XP_022956232.1 ylmG homolog protein 1-2, chloroplastic [Cucurbita moschata]) HSP 1 Score: 377.1 bits (967), Expect = 1.7e-100 Identity = 198/233 (84.98%), Postives = 207/233 (88.84%), Query Frame = 0
BLAST of ClCG07G014610 vs. NCBI nr
Match: XP_022980718.1 (ylmG homolog protein 1-2, chloroplastic-like [Cucurbita maxima] >XP_022980719.1 ylmG homolog protein 1-2, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 374.8 bits (961), Expect = 8.5e-100 Identity = 197/233 (84.55%), Postives = 206/233 (88.41%), Query Frame = 0
BLAST of ClCG07G014610 vs. NCBI nr
Match: KAG7018212.1 (YlmG-like protein 1-2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 372.9 bits (956), Expect = 3.2e-99 Identity = 197/233 (84.55%), Postives = 205/233 (87.98%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy Swiss-Prot
Match: Q9SUE0 (YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-2 PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.3e-55 Identity = 138/228 (60.53%), Postives = 155/228 (67.98%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy Swiss-Prot
Match: Q9SRS3 (YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-1 PE=2 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.0e-52 Identity = 127/241 (52.70%), Postives = 161/241 (66.80%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy Swiss-Prot
Match: Q9C595 (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.1e-12 Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy Swiss-Prot
Match: O78424 (Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 6.9e-12 Identity = 32/87 (36.78%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy Swiss-Prot
Match: P51353 (Uncharacterized protein ycf19 OS=Porphyra purpurea OX=2787 GN=ycf19 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.9e-10 Identity = 31/85 (36.47%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy TrEMBL
Match: A0A6J1GVR7 (ylmG homolog protein 1-2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457989 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 8.3e-101 Identity = 198/233 (84.98%), Postives = 207/233 (88.84%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy TrEMBL
Match: A0A6J1J015 (ylmG homolog protein 1-2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480002 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 4.1e-100 Identity = 197/233 (84.55%), Postives = 206/233 (88.41%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy TrEMBL
Match: A0A5D3C9Z4 (YlmG-like protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00210 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 4.6e-99 Identity = 193/226 (85.40%), Postives = 208/226 (92.04%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy TrEMBL
Match: A0A1S3CC91 (ylmG homolog protein 1-2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499156 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98 Identity = 192/226 (84.96%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of ClCG07G014610 vs. ExPASy TrEMBL
Match: A0A5A7VBM7 (YlmG-like protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G00220 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98 Identity = 192/226 (84.96%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of ClCG07G014610 vs. TAIR 10
Match: AT4G27990.1 (YGGT family protein ) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-56 Identity = 138/228 (60.53%), Postives = 155/228 (67.98%), Query Frame = 0
BLAST of ClCG07G014610 vs. TAIR 10
Match: AT3G07430.1 (YGGT family protein ) HSP 1 Score: 206.8 bits (525), Expect = 2.9e-53 Identity = 127/241 (52.70%), Postives = 161/241 (66.80%), Query Frame = 0
BLAST of ClCG07G014610 vs. TAIR 10
Match: AT5G21920.1 (YGGT family protein ) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-13 Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of ClCG07G014610 vs. TAIR 10
Match: AT5G21920.2 (YGGT family protein ) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-13 Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of ClCG07G014610 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 3.8e-05 Identity = 23/64 (35.94%), Postives = 42/64 (65.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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