Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTTGAGTCTCAGACTCCAGATGGAGCCAATTCTACTCTGTCACCGCCTATTGTGTCGCCGCCGATACCTTCTCCACCGCCTCCTTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCTCCACCACCCCCGCCTCCGCCTCCATCGTCATCTCCACCTCCATTTTCCCCACCGCCTCCATTTCCACCGCCTCCTCCGCCGGGTCGCCGTCGTCTTAGTCCACCGCCCTCTCATGCAACCTCCGCAGGGAATAGAAAAAAATCACCACCAGTGCCTCCGAATAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAATAACGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTCCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA
mRNA sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTTGAGTCTCAGACTCCAGATGGAGCCAATTCTACTCTGTCACCGCCTATTGTGTCGCCGCCGATACCTTCTCCACCGCCTCCTTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCTCCACCACCCCCGCCTCCGCCTCCATCGTCATCTCCACCTCCATTTTCCCCACCGCCTCCATTTCCACCGCCTCCTCCGCCGGGTCGCCGTCGTCTTAGTCCACCGCCCTCTCATGCAACCTCCGCAGGGAATAGAAAAAAATCACCACCAGTGCCTCCGAATAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAATAACGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTCCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA
Coding sequence (CDS)
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTTGAGTCTCAGACTCCAGATGGAGCCAATTCTACTCTGTCACCGCCTATTGTGTCGCCGCCGATACCTTCTCCACCGCCTCCTTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCTCCACCACCCCCGCCTCCGCCTCCATCGTCATCTCCACCTCCATTTTCCCCACCGCCTCCATTTCCACCGCCTCCTCCGCCGGGTCGCCGTCGTCTTAGTCCACCGCCCTCTCATGCAACCTCCGCAGGGAATAGAAAAAAATCACCACCAGTGCCTCCGAATAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAATAACGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTCCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA
Protein sequence
MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Homology
BLAST of ClCG07G014060 vs. NCBI nr
Match:
XP_008463997.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])
HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 143/179 (79.89%), Postives = 146/179 (81.56%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
MERPLTTLIFVISGFAFSVLSLLVESQTPD AN TL SPP+PSPPPPSP PPPP L
Sbjct: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTL-----SPPMPSPPPPSPSPPPPPL 60
Query: 61 SPPPPPPPPP-----PPPSSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNRKKSPP 120
PPPPPPPPP PPPS SPPPFSP PPPPP R R SPPP A+S +KK PP
Sbjct: 61 PPPPPPPPPPPRIISPPPSPSPPPFSP----SPPPPPHRHRRSPPPPLASSMERKKKRPP 120
Query: 121 VPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 175
VPP NINTNQ SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 VPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170
BLAST of ClCG07G014060 vs. NCBI nr
Match:
XP_038900729.1 (proline-rich receptor-like protein kinase PERK2 [Benincasa hispida])
HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48
Identity = 150/185 (81.08%), Postives = 151/185 (81.62%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
MERPLTTLIFVISGFAFSVLSLLVESQT DGAN TL SPPIPSPPPPSPPPPPP L
Sbjct: 1 MERPLTTLIFVISGFAFSVLSLLVESQTQDGANPTL-----SPPIPSPPPPSPPPPPPPL 60
Query: 61 SPPPPPPPPPPPP----------SSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNR 120
SP PPPPPPPPPP S SPPPFSPPPPFP P PP RR PPP HA+ N
Sbjct: 61 SPLPPPPPPPPPPPILSPPPPPLSPSPPPFSPPPPFPSPLPPRRR---PPPFHASE--NG 120
Query: 121 KKSPPVPPNNI-NTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 175
KKSPPVPP NI NTNQGSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
Sbjct: 121 KKSPPVPPKNINNTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 175
BLAST of ClCG07G014060 vs. NCBI nr
Match:
XP_011651738.2 (LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus])
HSP 1 Score: 202.2 bits (513), Expect = 3.6e-48
Identity = 140/174 (80.46%), Postives = 144/174 (82.76%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
MERPLTTLIFVI+GFAFSVLSLLVESQTPDGAN TLSPP S P PSP PP PP PPP
Sbjct: 1 MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
Query: 61 SPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNRKKSPPVPPNN 120
P PPPP PPPPS SPPPFSP PPPPPP R R +PPP A+S +KK PPVPP N
Sbjct: 61 PPXPPPPITPPPPSPSPPPFSP----PPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKN 120
Query: 121 INTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 175
INTNQGSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 INTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170
BLAST of ClCG07G014060 vs. NCBI nr
Match:
XP_023523257.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 146.0 bits (367), Expect = 3.1e-31
Identity = 131/193 (67.88%), Postives = 141/193 (73.06%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPP 60
MERP +TLIFVISGFAFS+LSLLVESQ DGA S+ SPP PP PSPPPPS PPPPP
Sbjct: 1 MERPFSTLIFVISGFAFSILSLLVESQARDGAISSSSPP---PPPPSPPPPSPPPPPPPP 60
Query: 61 PLLSPPPPPPP------PPPPPSSSPPP----FSPPPP-FPPPP--PPGRRRLSPPPSHA 120
P LSPP PPP PPPPP+ PPP SPPPP FPPPP P + R +PPPS
Sbjct: 61 PPLSPPQSPPPPSPNFVPPPPPNFVPPPPPASSSPPPPIFPPPPSLPSLQHRSTPPPSPP 120
Query: 121 TSAGN--RKKSPPVPPNNINTN-QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRR 175
A + KK P V NN + N +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRR
Sbjct: 121 IPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRR 180
BLAST of ClCG07G014060 vs. NCBI nr
Match:
XP_022948467.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita moschata])
HSP 1 Score: 144.1 bits (362), Expect = 1.2e-30
Identity = 124/186 (66.67%), Postives = 137/186 (73.66%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPP 60
MERP +TLIFVISGFAFS+LSLLVESQ DGA + SPP PP PSPPPPS PPPPP
Sbjct: 1 MERPFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPP-PPPPPPSPPPPSPPPPPPPP 60
Query: 61 PLLSPPPPPPPPPPPPSSSPPP----FSPPPP-FPPPP--PPGRRRLSPPPSHATSAGNR 120
P LSPP PPPP P P+ PPP SPPPP FPPPP P + R +PPP ++ +
Sbjct: 61 PPLSPPQSPPPPSPSPNFVPPPPPASSSPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDA 120
Query: 121 KKSPPVPPNNINTN--QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD 175
K PP N N++ +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KD
Sbjct: 121 NKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRFKD 180
BLAST of ClCG07G014060 vs. ExPASy TrEMBL
Match:
A0A0A0LC75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651880 PE=4 SV=1)
HSP 1 Score: 205.3 bits (521), Expect = 2.1e-49
Identity = 141/174 (81.03%), Postives = 145/174 (83.33%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
MERPLTTLIFVI+GFAFSVLSLLVESQTPDGAN TLSPP S P PSP PP PP PPP
Sbjct: 1 MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
Query: 61 SPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNRKKSPPVPPNN 120
PPPPPP PPPPS SPPPFSP PPPPPP R R +PPP A+S +KK PPVPP N
Sbjct: 61 PPPPPPPITPPPPSPSPPPFSP----PPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKN 120
Query: 121 INTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 175
INTNQGSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 INTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170
BLAST of ClCG07G014060 vs. ExPASy TrEMBL
Match:
A0A1S3CKG6 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103501988 PE=4 SV=1)
HSP 1 Score: 203.8 bits (517), Expect = 6.0e-49
Identity = 143/179 (79.89%), Postives = 146/179 (81.56%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
MERPLTTLIFVISGFAFSVLSLLVESQTPD AN TL SPP+PSPPPPSP PPPP L
Sbjct: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTL-----SPPMPSPPPPSPSPPPPPL 60
Query: 61 SPPPPPPPPP-----PPPSSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNRKKSPP 120
PPPPPPPPP PPPS SPPPFSP PPPPP R R SPPP A+S +KK PP
Sbjct: 61 PPPPPPPPPPPRIISPPPSPSPPPFSP----SPPPPPHRHRRSPPPPLASSMERKKKRPP 120
Query: 121 VPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 175
VPP NINTNQ SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 121 VPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 170
BLAST of ClCG07G014060 vs. ExPASy TrEMBL
Match:
A0A6J1G9A4 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111452141 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 5.7e-31
Identity = 124/186 (66.67%), Postives = 137/186 (73.66%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPP 60
MERP +TLIFVISGFAFS+LSLLVESQ DGA + SPP PP PSPPPPS PPPPP
Sbjct: 1 MERPFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPP-PPPPPPSPPPPSPPPPPPPP 60
Query: 61 PLLSPPPPPPPPPPPPSSSPPP----FSPPPP-FPPPP--PPGRRRLSPPPSHATSAGNR 120
P LSPP PPPP P P+ PPP SPPPP FPPPP P + R +PPP ++ +
Sbjct: 61 PPLSPPQSPPPPSPSPNFVPPPPPASSSPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDA 120
Query: 121 KKSPPVPPNNINTN--QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD 175
K PP N N++ +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KD
Sbjct: 121 NKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRFKD 180
BLAST of ClCG07G014060 vs. ExPASy TrEMBL
Match:
A0A6J1KAI1 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111493162 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 132/205 (64.39%), Postives = 141/205 (68.78%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLL 60
MERPL+T IFVISGFAFS+LSLLVESQ DGA S+ SPP PP PSPPPPSPPPPPP L
Sbjct: 1 MERPLSTFIFVISGFAFSILSLLVESQARDGAISSSSPP---PPPPSPPPPSPPPPPPPL 60
Query: 61 SPP------------------PPPPPP---PPPPSSSPP-----PFSPPPPFPPPP-PPG 120
SPP PPPP P PPPP PP P SPPP FPPPP PP
Sbjct: 61 SPPQSPPLSPPQSPPQSPPLSPPPPSPNFVPPPPIFVPPPPPASPSSPPPIFPPPPSPPS 120
Query: 121 RRRLS---PPPSHATSAGNRKKSPPVPPNNINTN-QGSKRSLNNGKKVGLFFVGIAAVLQ 175
+ S PPP A+S N KK P V NN + N +GSKRSLN GKKVGLFFVGIAAVLQ
Sbjct: 121 LQHRSTPLPPPIPASSDAN-KKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQ 180
BLAST of ClCG07G014060 vs. ExPASy TrEMBL
Match:
A0A6J1DGD7 (proline-rich receptor-like protein kinase PERK9 OS=Momordica charantia OX=3673 GN=LOC111020262 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 6.1e-25
Identity = 113/179 (63.13%), Postives = 123/179 (68.72%), Query Frame = 0
Query: 1 MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPP-IPSPPPPSPPPPPPL 60
MERPLTT IFVISGFAFS+LSLLVE Q D NS ++P SPP +PSPPP SP
Sbjct: 1 MERPLTTFIFVISGFAFSILSLLVECQPQDRPNSPVTP---SPPRLPSPPPRSP------ 60
Query: 61 LSPPPPPPPPPPPPSSSPPPFSPPPPFP--PPPPPGRRRLSPPPSHATSAGNRK-KSPPV 120
S PPP PP PP PS P SPPPP P PPPP RR SPPPS A+SA N +
Sbjct: 61 -SLPPPSPPSPPQPS----PLSPPPPSPVSPPPPRRRRSSSPPPSRASSARNENPQLGGT 120
Query: 121 PPNNINTNQGSKRS-LNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 175
N NQ KRS LN GK+VGLFFVGIAAVLQ+CVVGFLVFKRRQLLR K++YE FS
Sbjct: 121 HKKNNKKNQAEKRSRLNKGKQVGLFFVGIAAVLQVCVVGFLVFKRRQLLRFKEQYESFS 165
BLAST of ClCG07G014060 vs. TAIR 10
Match:
AT1G54215.1 (proline-rich family protein )
HSP 1 Score: 45.1 bits (105), Expect = 6.9e-05
Identity = 79/176 (44.89%), Postives = 94/176 (53.41%), Query Frame = 0
Query: 9 IFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPP-- 68
+F+++ F LLV+SQ P L P PP P PPPP PPPPPP PPPPP
Sbjct: 15 VFILALFFTIHCFLLVQSQDP-----PLFPQSPPPPPPPPPPPPPPPPPP---PPPPPAV 74
Query: 69 --------PPPPPP------PSSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNRKK 128
PPPPPP P SSPPP PPP PPP P ++ L P H
Sbjct: 75 NMSVETGIPPPPPPVTDMIKPLSSPPPPQPPPRSQPPPKPPQKNL--PRRH--------- 134
Query: 129 SPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD 169
P PP + + + LN GK VGL FVG+ A+LQ+ VV FLVFKR+QLL +KD
Sbjct: 135 --PPPPR--SPEKPKRDGLNKGKTVGLVFVGLIAMLQVIVVVFLVFKRKQLLSLKD 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008463997.1 | 1.2e-48 | 79.89 | PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] | [more] |
XP_038900729.1 | 1.6e-48 | 81.08 | proline-rich receptor-like protein kinase PERK2 [Benincasa hispida] | [more] |
XP_011651738.2 | 3.6e-48 | 80.46 | LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus] | [more] |
XP_023523257.1 | 3.1e-31 | 67.88 | leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo] | [more] |
XP_022948467.1 | 1.2e-30 | 66.67 | leucine-rich repeat extensin-like protein 3 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LC75 | 2.1e-49 | 81.03 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651880 PE=4 SV=1 | [more] |
A0A1S3CKG6 | 6.0e-49 | 79.89 | leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103501... | [more] |
A0A6J1G9A4 | 5.7e-31 | 66.67 | leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1KAI1 | 1.7e-30 | 64.39 | leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1DGD7 | 6.1e-25 | 63.13 | proline-rich receptor-like protein kinase PERK9 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
AT1G54215.1 | 6.9e-05 | 44.89 | proline-rich family protein | [more] |