ClCG07G013370 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGGGGTTATCTTATATAAATACATCTAAAGCTCAGGCCACCGAAAGCACCAAACCTTATCAAATTCTGTTTTTTCTTTCTACTTGTGTTTGCTCTTTTGTTCCTGTTCTTCATCTTCTTCGTCTTCTTCATTATGGGTGAAATACAGAGACTTATGTTTCATCAACCATGTTCGGTTACAGTACACCAAGAGTTCCATGAAGAATTAGAAGATCATTGGACGATCACCAAGGGAGATGATCACTACAACGTTGCATCTTCAACATCATCATTTGAAAATTCAACGATTTCGAGTGAATCATTATCTTCACTAGACTTGGAAGATGATGCGTGTTCATCGACTTCGAATTCTTCGTCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTTTTGCTCAACTGCCAATCAAGTAAGCTTTGATGAATTTCTTTCATTAGAATCATAAGTATGACTCTTTAAACTATGGCTGAATCTGGTTCCAAAGTTTCTAACAACTACTACTCTATGTACAGGAGAGGACTATCAATGTTCTATCAGGGAAAGTCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCATACAGCAGGAGACTGAATACATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAAAGTAATCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTACTTTGGCTGGTTGTAGACCTCCTTCCGTTCCTGTATATGATCAGAGCTTTTGATCCCTGAGTACTCCCAACATTAAATTGGCCATTTTTTCCATTTAACTTTTGCTTGTACAGTAGAATGCAAATGAAAATCCCGTGGCTGGCTTTATAGCCAATTTTTACTCTCTCAGCATTAATGAGAGTTTCTGATGGAAATTCTTGCA CAAAGGGGTTATCTTATATAAATACATCTAAAGCTCAGGCCACCGAAAGCACCAAACCTTATCAAATTCTGTTTTTTCTTTCTACTTGTGTTTGCTCTTTTGTTCCTGTTCTTCATCTTCTTCGTCTTCTTCATTATGGGTGAAATACAGAGACTTATGTTTCATCAACCATGTTCGGTTACAGTACACCAAGAGTTCCATGAAGAATTAGAAGATCATTGGACGATCACCAAGGGAGATGATCACTACAACGTTGCATCTTCAACATCATCATTTGAAAATTCAACGATTTCGAGTGAATCATTATCTTCACTAGACTTGGAAGATGATGCGTGTTCATCGACTTCGAATTCTTCGTCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTTTTGCTCAACTGCCAATCAAGAGAGGACTATCAATGTTCTATCAGGGAAAGTCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCATACAGCAGGAGACTGAATACATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAAAGTAATCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTACTTTGGCTGGTTGTAGACCTCCTTCCGTTCCTGTATATGATCAGAGCTTTTGATCCCTGAGTACTCCCAACATTAAATTGGCCATTTTTTCCATTTAACTTTTGCTTGTACAGTAGAATGCAAATGAAAATCCCGTGGCTGGCTTTATAGCCAATTTTTACTCTCTCAGCATTAATGAGAGTTTCTGATGGAAATTCTTGCA ATGGGTGAAATACAGAGACTTATGTTTCATCAACCATGTTCGGTTACAGTACACCAAGAGTTCCATGAAGAATTAGAAGATCATTGGACGATCACCAAGGGAGATGATCACTACAACGTTGCATCTTCAACATCATCATTTGAAAATTCAACGATTTCGAGTGAATCATTATCTTCACTAGACTTGGAAGATGATGCGTGTTCATCGACTTCGAATTCTTCGTCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTTTTGCTCAACTGCCAATCAAGAGAGGACTATCAATGTTCTATCAGGGAAAGTCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCATACAGCAGGAGACTGAATACATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAAAGTAATCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTACTTTGGCTGGTTGTAGACCTCCTTCCGTTCCTGTATATGATCAGAGCTTTTGA MGEIQRLMFHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSFENSTISSESLSSLDLEDDACSSTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPKKENPYSRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSNLSFVQVRRGSTLAGCRPPSVPVYDQSF Homology
BLAST of ClCG07G013370 vs. NCBI nr
Match: XP_038877919.1 (uncharacterized protein LOC120070129 [Benincasa hispida]) HSP 1 Score: 337.8 bits (865), Expect = 6.0e-89 Identity = 175/191 (91.62%), Postives = 181/191 (94.76%), Query Frame = 0
BLAST of ClCG07G013370 vs. NCBI nr
Match: XP_008447561.1 (PREDICTED: uncharacterized protein LOC103489976 [Cucumis melo] >KAA0050854.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa] >TYK08498.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 334.3 bits (856), Expect = 6.7e-88 Identity = 166/190 (87.37%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of ClCG07G013370 vs. NCBI nr
Match: XP_004149181.1 (uncharacterized protein LOC101218329 [Cucumis sativus] >KGN58023.1 hypothetical protein Csa_011606 [Cucumis sativus]) HSP 1 Score: 321.6 bits (823), Expect = 4.5e-84 Identity = 163/190 (85.79%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of ClCG07G013370 vs. NCBI nr
Match: XP_022153661.1 (uncharacterized protein LOC111021114 [Momordica charantia]) HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68 Identity = 147/190 (77.37%), Postives = 164/190 (86.32%), Query Frame = 0
BLAST of ClCG07G013370 vs. NCBI nr
Match: XP_023524906.1 (uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 208.0 bits (528), Expect = 7.2e-50 Identity = 115/159 (72.33%), Postives = 129/159 (81.13%), Query Frame = 0
BLAST of ClCG07G013370 vs. ExPASy TrEMBL
Match: A0A5D3CBD2 (Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00260 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88 Identity = 166/190 (87.37%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of ClCG07G013370 vs. ExPASy TrEMBL
Match: A0A1S3BH50 (uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88 Identity = 166/190 (87.37%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of ClCG07G013370 vs. ExPASy TrEMBL
Match: A0A0A0L8C9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G435530 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.2e-84 Identity = 163/190 (85.79%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of ClCG07G013370 vs. ExPASy TrEMBL
Match: A0A6J1DLD1 (uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021114 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 5.7e-69 Identity = 147/190 (77.37%), Postives = 164/190 (86.32%), Query Frame = 0
BLAST of ClCG07G013370 vs. ExPASy TrEMBL
Match: A0A6J1KCR8 (uncharacterized protein LOC111492699 OS=Cucurbita maxima OX=3661 GN=LOC111492699 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 6.6e-49 Identity = 114/155 (73.55%), Postives = 127/155 (81.94%), Query Frame = 0
BLAST of ClCG07G013370 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16 Identity = 63/142 (44.37%), Postives = 79/142 (55.63%), Query Frame = 0
BLAST of ClCG07G013370 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 80.5 bits (197), Expect = 1.6e-15 Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0
BLAST of ClCG07G013370 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07 Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = 0
BLAST of ClCG07G013370 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 3.6e-07 Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of ClCG07G013370 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06 Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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