ClCG07G012260 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCTCAGCAATCTTCTTCCTCCGTGCAAACTACCTACGTTTTACCTCTTCTTCGAGGTGAGAAGGTAGATTTTGATTTCCGGGTATTGAATCTCAGCGACAAACAATGGGAAACTCCTCCTCGATGCTCACTCAATATGATATTGAAGAAGTTCAACGGCACTGCGATAATCTATGTGAGTGTTTTTCGATTTCTGTTCTTTATTCTTTCATTCCATACTCTTCGCTTCTAATTTCTCTCGGTTCTCATTCATTTTGCCTCTACAATTCAGTTACGCTACAAGAAATAGTGTCACTGTATCAGAGGTTTTGTCAACTCGATCGCAACTCGAAGGGATACATCTTGGCCGATGAGTTCTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGGTTTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTCCATTTCTATGGTTGATTTCTTGAAATAGTAAGATTCTGAGCCTAATTTTGTGAAGTTCATGTACTTTAATCGGTGAATGATGGTTTGTCCTTTCCTTTTTGTGTTTCCAGAGGCTTCTGAAGATGGTTGATGGTTTGAACTTTAAGGATTTCGTGGCGTTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACGTAAAATTGAATGTACGTTTAAAATGCTTACTTGCGCTTGTTTAGATCCTGTCTGATGACATTCTTCATTTGTTTGTTTGACAATGTTCTCTTGTTATTCTAAAAATTTTCTTTAAAGTTTAGAGCAGAATTCTGGTTTATATTTCCCACTTTCCACACTTAATTGTACAGAAATGTTGTGGAATAGTGAATTTTCCATTTAAGACGTTCCTTTAGAGATATTTGATGATTTCGACATTGTAATATTCAACAGAATGTTTAAGAAAAAAAAAAATTTCTCCTTTTCTGCACTTCTGTCAAAACAATGCTGGTATTCTTATGTTTTTGAATTTGATAGTATTGGGAATTTATGAAGTTGATAAGGACAACGGGACCTCTCTCTCTTTACATTGTCCACTTTGGACATAAGTTTTCATACCTTTGCTTCTGGTTTTCACCCGAAAGGTCTTATACCAATAGAGATAATTGTCTTACCATGGATCTCTCCCTACCATGGATCTCTCCCTTTGCTAACTAACATGAGACTTTGTTTGCACTCCTAACCATAGCTATCCAATGTGATTATAGTTTCCTTCCAGAAGTATAAATAGTGAGAAAAGGTTATCAAATGGGCTTTAAAAGTATTCTCCAATTAACTTATTGTAATTGGCTTAATAGGGCCTAGGTCGATAGCGTAACATAGTGAATTTGGCCTTATAAGTTGATGTACGATTTTGGATTGTAAAAGTTATCAGCATGATTTGAGTAGCCATTTTAATATTGTTTTGGATAGTGTAAGAGTATTTGGTCAAAGACTCAATGTATATCTTAATAATTTTTTTTTTCTTTATTAGATAACATTCTTCATTTATGGTGAGAGAGAGCGGTTGACTTCAGTAGTTATATTTCCTTCTGCCTATCAGAAACAGGGCACTATATCTCCTCTTTTCTGTTCTTGTCAATCGTTTTCTTTACCCACTAACATCATACTCTTTTAGCTACAAATTTGATTATCTAAAATTTTACTCAATGCCATGCTGATTTAATCCGCTTTGTTGTCTTGATTGAAAAAGCTTGGACTCATCAGATATTATTTGTTTTTGTTTCATCAGTTATGTTCATAGTATACGATGTGGACTTTAATGGGAAGGTGTCTTTCAATGACATGATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGGTACTCAAAGACGTTGCACTAAATCTTATGAGGCATTTGGAGAATTGTATATATTTTCCATGACACATGGCATGTTATAAACTTTTGTCTTTTTATCTCTTTTGCAGAAAGTCTTAAGCCAACTTCTGGAGGAAGCAGGTTACACAAAGGAAATCTATTTAACCCAGGAGGATTTCGTTAAGGTTTGTTTTTACTATCATAAATCTCATTCCTGTTCATTTGTACCAATTACAAGACCAAGTGAGTCAGCGACTTCCTAATCTTACACAGTATACAAACACAAAAATAATTTATAATTAGTTGAAACTTGGATGAATTAAATTGAGAAAAGGGTGTACATTAATCATCTAAAATTAGCCGAATATTACCACACAGATAAAGTAGTGAAATCTCAAGGAAATTTGTGAATCAATAGTCATTAACATTCACAATCATATTTGAAAACTTAAGAAAATTTGTACAACTATCAATAACAGTACCTTGTTGTTGAAGTTTAGACTTCATTGTTGAAATCATTTCAGACTTAAACTTACTGATTCTTCAACATCTGAATGAAAACGTTCCACCCAATCATGGTTGAGTTGCTTATTTTCTACACCCCAGAATTACTTCATTATTCATCACTTGGTGTCTTGCACGATAACCTTTCCATGAATTTTCCTATAATCCATCTAGTTCACTTTTGTGATCCCGTACAAACTATTATTGTACTGACTTCAGTCATCTGAACTTGCTGTGAGTCATTCACAACTTGCTCGATCTATATATTCCCTGTGCTGCAATATATTGTAATATGTAGTTTTGTTCTTTTGCAGATTCTTGGCAATTCGGACCTGAAAATGGAGGTTGAGGTGCCTGTCGATTAAGATGACTACTTAAACTATTCTAATTAGCCATTTAGACAAGGAGAAACACGTGAAGTATGGAAACGATAAATTACTAGCTGAAGCATCATGTATCATGTCTTTCTCAGGCAATTTCAGCGTTGATGAACAACTTCAATTCTCAAACATGTTCATTTATTCAACTGCTTACTCAATTCAGCCCGTGGCTCATCCTGTTGTATACAGATATATATATTAAAGATTTCGAACTATCTTAATGAGAATCTCTCTAAAACGAACTATTTCTCATCAATTTTGCTTAAACTACTGTCTCTAACTACTACTGAACTCAAAAAATTAAATGATTGAGACATGATAAAGTTAATAGGAGTAGTCTATCATAAGAAATTGAGGAATTCTGATTAGCCATTTGGATTGTCTTAGATGTATGTATGGGGATCGTTTGAATTGGTTATGGGTAATTCAGTAGACAATACATTTAAAACAATCTTATTTAACATAACCCTTTCACTTCATTGTTTGTTGTCTTATAAGGTGAAGATAAGGTCGATGGTTTGAAAATGCTGCAGGATGTTACATGACGCCAAAGCTTCTGTAGAAATGGAGCCAAAACTTGCCACTTGAAGTAGACACAACAATCCTCTAAAAGCCGCCATCAGAGGCTCGTCGTATCCACCGACTCAGGTTTTACTCTTAAAACTTCATCTTGAGAAATGTGCAGAAAATCTCTCTCTCTAGAAACGAAAATTCTGGTGTGTTCTGTTGAGTCCATTTCCTGTATCTTTTTCGAAGCTTGGTTACTTTGCCACTGCAACCCTCTCCATAAGCAACATTCATTCACATGTCACAATCATGTCTCCTACCCAACCTCTTCTTTTTGTTTTTCTTTTTTTCTTATTTTTTTCCCCCAACCAAAATCTCCTTTTTTGTTGAGAACATGAAAAGGCTAAAGCTTTTCATCGATTTTATTTTTCCAATACTATTGAAGCTAAACTTTATCATCATCCTCTTCACATTCTCCATATGGCACTGATTCCCAAATATAAATTCCTCTCCCTTTCTCTCCCTCTCTCCGAAGCCAGTCCAACTAAGAAAAACTCTTCTTGTGTTTCAAAAACTTCACACAACAACCGAGAGAACTTGCAAACTGGCCTCAGAAGTTGATGAAGCTGACTGTTTTCTAAGGCAGCTACAATGGCAACACCATAAACGCTCTCATGGTCATGCAACTGAAGCAGATGGTTCAAGTCATGGGATGGTTTTAAGAGCATTTGATCGAAATGGGGTTGCAAAAAGCTCGTCGAAAGACAATCCCAGATCGAGAGTGAAGGCTTGCGAAATTGAAAAGATCAGTAGAAAACTGAGCATTCTTGAAGAAGAGACAAGAGCTATGAAGAAAGCTATGTTTGACAGTTTGGAAGAAAGCAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGACCCTAAACAAAAGCCATAGCCATACATTCTGTAATGAGGTAGCTGCTGCTTTGATGGCTTCTCTTGAAGATCAGGATGAGAAACTCCATCCCCCTAAGGTAAAATGATTTGAATCTTGTGATATACTTCAAATTTCTTGAATAATATGGGAGTGATTTTGAAATGGTTAAAATCAGTTTTGTGATATTCAAATTCACTTTATAACACATCTTTAATCCTTTAAAATCAACTTTAATGTTCAATTTTCACTTTTAAATGTTATTTTCATATAACTAAAATGAGCTTAGCTCAACAGTAACTGACATGCATTCTCTTCTTTGAAGTTAAAGGTGTACTAGAAAATGTTATTTTCATACCACTAAAATTGATTTTGAATGATTAATAATATGTTTTAGAGTAATTTTTAACGTGACAAAAATGATGCTAATAATTTCAGAACTAATATATATATATATATTCTTAATAGGAACTCAATTTACAAAAAAAGAAATACATTAGTTTTGCATTATTTTGTGGGATTACTTATAGGCCCCTCTCTATTACTTAGTTTATATGGTTGTGGATTTGGTGGAGAAAACAGGAATGGAGAAGTGGCGTTGGCCTATCAGAAATCTTTCAACACCAAACAAATATATCTCTCGTCTTCAAACATTTCAAAGCAAATTTGTTGGCATTGACAGATTCTGCAAAATCCTTGCATCTTATAAGAGAAAAATGATCTCTCTTTTCTCATAGATACATGTAAAATTGGAGAGACTTGAATTTCAGTATTCAACCCAATGAATCTAATTTGACT AATTCTCAGCAATCTTCTTCCTCCGTGCAAACTACCTACGTTTTACCTCTTCTTCGAGGTGAGAAGGTAGATTTTGATTTCCGGCGACAAACAATGGGAAACTCCTCCTCGATGCTCACTCAATATGATATTGAAGAAGTTCAACGGCACTGCGATAATCTATTTACGCTACAAGAAATAGTGTCACTGTATCAGAGGTTTTGTCAACTCGATCGCAACTCGAAGGGATACATCTTGGCCGATGAGTTCTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGAGGCTTCTGAAGATGGTTGATGGTTTGAACTTTAAGGATTTCGTGGCGTTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACTTATGTTCATAGTATACGATGTGGACTTTAATGGGAAGGTGTCTTTCAATGACATGATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGAAAGTCTTAAGCCAACTTCTGGAGGAAGCAGGTTACACAAAGGAAATCTATTTAACCCAGGAGGATTTCGTTAAGATTCTTGGCAATTCGGACCTGAAAATGGAGGTTGAGGAGAAACACGTGAAGTATGGAAACGATAAATTACTAGCTGAAGCATCATGTATCATGTCTTTCTCAGGCAATTTCAGCGTTGATGAACAACTTCAATTCTCAAACATACACAACAATCCTCTAAAAGCCGCCATCAGAGGCTCGTCGTATCCACCGACTCAGCCAGTCCAACTAAGAAAAACTCTTCTTGTGTTTCAAAAACTTCACACAACAACCGAGAGAACTTGCAAACTGGCCTCAGAAGTTGATGAAGCTGACTGTTTTCTAAGGCAGCTACAATGGCAACACCATAAACGCTCTCATGGTCATGCAACTGAAGCAGATGGTTCAAGTCATGGGATGGTTTTAAGAGCATTTGATCGAAATGGGGTTGCAAAAAGCTCGTCGAAAGACAATCCCAGATCGAGAGTGAAGGCTTGCGAAATTGAAAAGATCAGTAGAAAACTGAGCATTCTTGAAGAAGAGACAAGAGCTATGAAGAAAGCTATGTTTGACAGTTTGGAAGAAAGCAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGACCCTAAACAAAAGCCATAGCCATACATTCTGTAATGAGGAATGGAGAAGTGGCGTTGGCCTATCAGAAATCTTTCAACACCAAACAAATATATCTCTCGTCTTCAAACATTTCAAAGCAAATTTGTTGGCATTGACAGATTCTGCAAAATCCTTGCATCTTATAAGAGAAAAATGATCTCTCTTTTCTCATAGATACATGTAAAATTGGAGAGACTTGAATTTCAGTATTCAACCCAATGAATCTAATTTGACT AATTCTCAGCAATCTTCTTCCTCCGTGCAAACTACCTACGTTTTACCTCTTCTTCGAGGTGAGAAGGTAGATTTTGATTTCCGGCGACAAACAATGGGAAACTCCTCCTCGATGCTCACTCAATATGATATTGAAGAAGTTCAACGGCACTGCGATAATCTATTTACGCTACAAGAAATAGTGTCACTGTATCAGAGGTTTTGTCAACTCGATCGCAACTCGAAGGGATACATCTTGGCCGATGAGTTCTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGAGGCTTCTGAAGATGGTTGATGGTTTGAACTTTAAGGATTTCGTGGCGTTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACTTATGTTCATAGTATACGATGTGGACTTTAATGGGAAGGTGTCTTTCAATGACATGATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGAAAGTCTTAAGCCAACTTCTGGAGGAAGCAGGTTACACAAAGGAAATCTATTTAACCCAGGAGGATTTCGTTAAGATTCTTGGCAATTCGGACCTGAAAATGGAGGTTGAGGAGAAACACGTGAAGTATGGAAACGATAAATTACTAGCTGAAGCATCATGTATCATGTCTTTCTCAGGCAATTTCAGCGTTGATGAACAACTTCAATTCTCAAACATACACAACAATCCTCTAAAAGCCGCCATCAGAGGCTCGTCGTATCCACCGACTCAGCCAGTCCAACTAAGAAAAACTCTTCTTGTGTTTCAAAAACTTCACACAACAACCGAGAGAACTTGCAAACTGGCCTCAGAAGTTGATGAAGCTGACTGTTTTCTAAGGCAGCTACAATGGCAACACCATAAACGCTCTCATGGTCATGCAACTGAAGCAGATGGTTCAAGTCATGGGATGGTTTTAAGAGCATTTGATCGAAATGGGGTTGCAAAAAGCTCGTCGAAAGACAATCCCAGATCGAGAGTGAAGGCTTGCGAAATTGAAAAGATCAGTAGAAAACTGAGCATTCTTGAAGAAGAGACAAGAGCTATGAAGAAAGCTATGTTTGACAGTTTGGAAGAAAGCAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGACCCTAAACAAAAGCCATAGCCATACATTCTGTAATGAGGAATGGAGAAGTGGCGTTGGCCTATCAGAAATCTTTCAACACCAAACAAATATATCTCTCGTCTTCAAACATTTCAAAGCAAATTTGTTGGCATTGACAGATTCTGCAAAATCCTTGCATCTTATAAGAGAAAAATGA NSQQSSSSVQTTYVLPLLRGEKVDFDFRRQTMGNSSSMLTQYDIEEVQRHCDNLFTLQEIVSLYQRFCQLDRNSKGYILADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAFLSAFSAKASIQLMFIVYDVDFNGKVSFNDMIEVLQDLSGPFMSDDQRKKVLSQLLEEAGYTKEIYLTQEDFVKILGNSDLKMEVEEKHVKYGNDKLLAEASCIMSFSGNFSVDEQLQFSNIHNNPLKAAIRGSSYPPTQPVQLRKTLLVFQKLHTTTERTCKLASEVDEADCFLRQLQWQHHKRSHGHATEADGSSHGMVLRAFDRNGVAKSSSKDNPRSRVKACEIEKISRKLSILEEETRAMKKAMFDSLEESRNLVYEINQQFQTLNKSHSHTFCNEEWRSGVGLSEIFQHQTNISLVFKHFKANLLALTDSAKSLHLIREK Homology
BLAST of ClCG07G012260 vs. NCBI nr
Match: KAE8649065.1 (hypothetical protein Csa_014725 [Cucumis sativus]) HSP 1 Score: 477.2 bits (1227), Expect = 1.5e-130 Identity = 272/428 (63.55%), Postives = 294/428 (68.69%), Query Frame = 0
BLAST of ClCG07G012260 vs. NCBI nr
Match: XP_038898200.1 (calcineurin subunit B-like isoform X1 [Benincasa hispida]) HSP 1 Score: 305.4 bits (781), Expect = 7.7e-79 Identity = 157/171 (91.81%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of ClCG07G012260 vs. NCBI nr
Match: KAA0044471.1 (calcineurin subunit B-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 304.7 bits (779), Expect = 1.3e-78 Identity = 157/171 (91.81%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of ClCG07G012260 vs. NCBI nr
Match: XP_008454189.1 (PREDICTED: calcineurin subunit B-like isoform X1 [Cucumis melo] >TYK29598.1 calcineurin subunit B-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 302.8 bits (774), Expect = 5.0e-78 Identity = 156/171 (91.23%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of ClCG07G012260 vs. NCBI nr
Match: XP_004152181.1 (calcineurin subunit B [Cucumis sativus] >XP_031739972.1 calcineurin subunit B [Cucumis sativus]) HSP 1 Score: 302.4 bits (773), Expect = 6.5e-78 Identity = 156/171 (91.23%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy Swiss-Prot
Match: P42322 (Calcineurin subunit B OS=Naegleria gruberi OX=5762 GN=CNB1 PE=3 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 4.0e-22 Identity = 61/172 (35.47%), Postives = 106/172 (61.63%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy Swiss-Prot
Match: Q55G87 (Calcineurin subunit B type 1 OS=Dictyostelium discoideum OX=44689 GN=cnbA PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.4e-19 Identity = 53/178 (29.78%), Postives = 109/178 (61.24%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy Swiss-Prot
Match: P87072 (Calcineurin subunit B OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cnb-1 PE=2 SV=2) HSP 1 Score: 92.8 bits (229), Expect = 1.0e-17 Identity = 53/175 (30.29%), Postives = 106/175 (60.57%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy Swiss-Prot
Match: Q24214 (Calcineurin subunit B type 2 OS=Drosophila melanogaster OX=7227 GN=CanB2 PE=1 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 2.8e-15 Identity = 53/178 (29.78%), Postives = 101/178 (56.74%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy Swiss-Prot
Match: P0CM55 (Calcineurin subunit B OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CNB1 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.8e-15 Identity = 47/148 (31.76%), Postives = 90/148 (60.81%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy TrEMBL
Match: A0A5A7TSD4 (Calcineurin subunit B-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002070 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 6.3e-79 Identity = 157/171 (91.81%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy TrEMBL
Match: A0A5D3E1G3 (Calcineurin subunit B-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002070 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 2.4e-78 Identity = 156/171 (91.23%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy TrEMBL
Match: A0A1S3BXI6 (calcineurin subunit B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494669 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 2.4e-78 Identity = 156/171 (91.23%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy TrEMBL
Match: A0A0A0KTI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006370 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 3.1e-78 Identity = 156/171 (91.23%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of ClCG07G012260 vs. ExPASy TrEMBL
Match: A0A6J1GWG5 (calcineurin subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC111458051 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 3.5e-77 Identity = 155/171 (90.64%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of ClCG07G012260 vs. TAIR 10
Match: AT3G18430.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 254.2 bits (648), Expect = 1.9e-67 Identity = 129/171 (75.44%), Postives = 151/171 (88.30%), Query Frame = 0
BLAST of ClCG07G012260 vs. TAIR 10
Match: AT3G18430.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 254.2 bits (648), Expect = 1.9e-67 Identity = 129/171 (75.44%), Postives = 151/171 (88.30%), Query Frame = 0
BLAST of ClCG07G012260 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 ) HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05 Identity = 35/147 (23.81%), Postives = 73/147 (49.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|