ClCG07G010920 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG07G010920
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransmembrane protein
LocationCG_Chr07: 26828890 .. 26829194 (+)
RNA-Seq ExpressionClCG07G010920
SyntenyClCG07G010920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGATTGCAGGAAATGGGGGTTCCAGTGCTGGGGATTGTTGCAGCTGCAGCCATCACCTTCTACGCCGTAAGCTTTTCAGAGCTTCGAGAGGTACCTTTCTGTCTTCCCTCTTTCCATGTTTCATACTTTTTAGACTTGAAATTATAAAACCAATTAATGGATTCTTAAATTGATGGAATGTGAAGAAATCATTCAGAGACTTTGATGAATCAGAGGATCAGAAAGGAGGGTTCCAGATGACTTCAAGTTCAAGAGAAAGGCGAGCAAGAAGGAAGGCTGAAAAGGAAGCTAAGAGATGA

mRNA sequence

ATGGATGGATTGCAGGAAATGGGGGTTCCAGTGCTGGGGATTGTTGCAGCTGCAGCCATCACCTTCTACGCCGTAAGCTTTTCAGAGCTTCGAGAGGTACCTTTCTGTCTTCCCTCTTTCCATAAATCATTCAGAGACTTTGATGAATCAGAGGATCAGAAAGGAGGGTTCCAGATGACTTCAAGTTCAAGAGAAAGGCGAGCAAGAAGGAAGGCTGAAAAGGAAGCTAAGAGATGA

Coding sequence (CDS)

ATGGATGGATTGCAGGAAATGGGGGTTCCAGTGCTGGGGATTGTTGCAGCTGCAGCCATCACCTTCTACGCCGTAAGCTTTTCAGAGCTTCGAGAGGTACCTTTCTGTCTTCCCTCTTTCCATAAATCATTCAGAGACTTTGATGAATCAGAGGATCAGAAAGGAGGGTTCCAGATGACTTCAAGTTCAAGAGAAAGGCGAGCAAGAAGGAAGGCTGAAAAGGAAGCTAAGAGATGA

Protein sequence

MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMTSSSRERRARRKAEKEAKR
Homology
[Close]
BLAST of ClCG07G010920 vs. NCBI nr
Match: XP_038900556.1 (uncharacterized protein LOC120087738 [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 3.4e-22
Identity = 66/78 (84.62%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQEMG+P+LGIVAAAAITFYAVSFSELRE         KSFRD DESEDQKGGFQMT
Sbjct: 1  MDGLQEMGIPMLGIVAAAAITFYAVSFSELRE---------KSFRDLDESEDQKGGFQMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. NCBI nr
Match: XP_008451897.1 (PREDICTED: uncharacterized protein LOC103493052 [Cucumis melo] >XP_008451898.1 PREDICTED: uncharacterized protein LOC103493052 [Cucumis melo] >XP_008451899.1 PREDICTED: uncharacterized protein LOC103493052 [Cucumis melo] >XP_008451900.1 PREDICTED: uncharacterized protein LOC103493052 [Cucumis melo] >XP_016901164.1 PREDICTED: uncharacterized protein LOC103493052 [Cucumis melo] >KAA0044991.1 uncharacterized protein E6C27_scaffold74G003010 [Cucumis melo var. makuwa] >TYK16480.1 uncharacterized protein E5676_scaffold21G002830 [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQEMG+P+LGIVAAAAITFYAVSFSELRE         KSF+D DE EDQKGGFQMT
Sbjct: 1  MDGLQEMGIPILGIVAAAAITFYAVSFSELRE---------KSFKDLDELEDQKGGFQMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. NCBI nr
Match: XP_004147735.1 (uncharacterized protein LOC101211279 [Cucumis sativus] >XP_011653258.1 uncharacterized protein LOC101211279 [Cucumis sativus] >KGN53493.1 hypothetical protein Csa_014484 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 3.8e-21
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQEMG+P+LGIVAAAAITFYAVSFSELRE         KSF+D DE EDQKGGFQMT
Sbjct: 1  MDGLQEMGIPMLGIVAAAAITFYAVSFSELRE---------KSFKDLDELEDQKGGFQMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. NCBI nr
Match: XP_022136426.1 (uncharacterized protein LOC111008135 [Momordica charantia])

HSP 1 Score: 106.7 bits (265), Expect = 9.3e-20
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQ++G+PVLGIVAAAAITFYAVSF+ELRE         KSF+D DESED+ GGF+MT
Sbjct: 1  MDGLQQLGIPVLGIVAAAAITFYAVSFAELRE---------KSFKDLDESEDENGGFKMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. NCBI nr
Match: XP_023545078.1 (uncharacterized protein LOC111804483 [Cucurbita pepo subsp. pepo] >KAG6600446.1 hypothetical protein SDJN03_05679, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18
Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQ++GVP++GIVAAAAITFYAVSFSE+RE         KSFRD DESED+  GF+MT
Sbjct: 1  MDGLQQLGVPLMGIVAAAAITFYAVSFSEIRE---------KSFRDLDESEDENPGFKMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          +SSRERRARRKAEKEAKR
Sbjct: 61 ASSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. ExPASy TrEMBL
Match: A0A1S3BRZ5 (uncharacterized protein LOC103493052 OS=Cucumis melo OX=3656 GN=LOC103493052 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQEMG+P+LGIVAAAAITFYAVSFSELRE         KSF+D DE EDQKGGFQMT
Sbjct: 1  MDGLQEMGIPILGIVAAAAITFYAVSFSELRE---------KSFKDLDELEDQKGGFQMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. ExPASy TrEMBL
Match: A0A5D3CYP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002830 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQEMG+P+LGIVAAAAITFYAVSFSELRE         KSF+D DE EDQKGGFQMT
Sbjct: 1  MDGLQEMGIPILGIVAAAAITFYAVSFSELRE---------KSFKDLDELEDQKGGFQMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. ExPASy TrEMBL
Match: A0A0A0KVD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056810 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQEMG+P+LGIVAAAAITFYAVSFSELRE         KSF+D DE EDQKGGFQMT
Sbjct: 1  MDGLQEMGIPMLGIVAAAAITFYAVSFSELRE---------KSFKDLDELEDQKGGFQMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. ExPASy TrEMBL
Match: A0A6J1C3G9 (uncharacterized protein LOC111008135 OS=Momordica charantia OX=3673 GN=LOC111008135 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.5e-20
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQ++G+PVLGIVAAAAITFYAVSF+ELRE         KSF+D DESED+ GGF+MT
Sbjct: 1  MDGLQQLGIPVLGIVAAAAITFYAVSFAELRE---------KSFKDLDESEDENGGFKMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          SSSRERRARRKAEKEAKR
Sbjct: 61 SSSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. ExPASy TrEMBL
Match: A0A6J1J6A4 (uncharacterized protein LOC111482149 OS=Cucurbita maxima OX=3661 GN=LOC111482149 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.5e-18
Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          MDGLQ+ GVP++GIVAAAAITFYAVSFSE+RE         KSFRD DESED+  GF+MT
Sbjct: 1  MDGLQQWGVPLVGIVAAAAITFYAVSFSEIRE---------KSFRDLDESEDENRGFKMT 60

Query: 61 SSSRERRARRKAEKEAKR 79
          +SSRERRARRKAEKEAKR
Sbjct: 61 ASSRERRARRKAEKEAKR 69

[Close]
BLAST of ClCG07G010920 vs. TAIR 10
Match: AT3G22210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 5.4e-10
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 0 

Query: 1  MDGLQEMGVPVLGIVAAAAITFYAVSFSELREVPFCLPSFHKSFRDFDESEDQKGGFQMT 60
          M+G+  + +PVLGIVA + +TFYAVSF+E+RE         KSF+D  +SE++  GF+ +
Sbjct: 1  MEGISHIALPVLGIVAVSVVTFYAVSFAEIRE---------KSFKDVYDSENEV-GFKTS 60

Query: 61 SSSRERRARRKAEKE 76
           SSRERR++R+A K+
Sbjct: 61 LSSRERRSKREANKK 65

The following BLAST results are available for this feature:
BLAST of ClCG07G010920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900556.13.4e-2284.62uncharacterized protein LOC120087738 [Benincasa hispida][more]
XP_008451897.12.2e-2182.05PREDICTED: uncharacterized protein LOC103493052 [Cucumis melo] >XP_008451898.1 P... [more]
XP_004147735.13.8e-2182.05uncharacterized protein LOC101211279 [Cucumis sativus] >XP_011653258.1 uncharact... [more]
XP_022136426.19.3e-2076.92uncharacterized protein LOC111008135 [Momordica charantia][more]
XP_023545078.11.8e-1874.36uncharacterized protein LOC111804483 [Cucurbita pepo subsp. pepo] >KAG6600446.1 ... [more]
BLAST of ClCG07G010920 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG07G010920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BRZ51.1e-2182.05uncharacterized protein LOC103493052 OS=Cucumis melo OX=3656 GN=LOC103493052 PE=... [more]
A0A5D3CYP31.1e-2182.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KVD41.8e-2182.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056810 PE=4 SV=1[more]
A0A6J1C3G94.5e-2076.92uncharacterized protein LOC111008135 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1J6A42.5e-1874.36uncharacterized protein LOC111482149 OS=Cucurbita maxima OX=3661 GN=LOC111482149... [more]
BLAST of ClCG07G010920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G22210.15.4e-1048.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..78
NoneNo IPR availablePANTHERPTHR37225OSJNBA0011F23.3 PROTEINcoord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G010920.2ClCG07G010920.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane