ClCG07G008200 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G008200
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein SPIRAL1-like 5
Location	CG_Chr07: 21869281 .. 21870502 (+)
RNA-Seq Expression	ClCG07G008200
Synteny	ClCG07G008200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATATATGCGAGGACAATTATCACCATTGGTATGAGGTGTTTTTGGTCGTATTTATGCCCAAAATGGATAATATCATATCATTGTGGAGATATGTGGAAGTTCGTTGTCATTATCATGTCTTAACATCTACTACTTCCCTTAAGGTTGAAGGTTAAAATCTATTACTCTTTTTTTTTTTTTGCAAAAAAAGAAAAAAAATTGAACTTTCTGCCCATTCACTGTGAAGCCAAAATTTTCCAAGAACTTACAGAAAATTAGAGAAACCTTCCATAAGAAAAAAAGAAAGGGAAAAAAAAATGACAACTGCATAGCAATTTTGAACAGTGAATAGACCACCCAACTAGACATCATATCAACTACAACAACAAAAAAAGAAGGCCCAAATCACATACATATCAATCTATTTATATACATTTCACGCTCATGGGGATCATATCATGATATATATATAAATTATTGAACAACCAACATTAGGGTTTCTAAGTTTCTTTGGTGCTGTTGTGTGCCATTTTTTCTCCTTCTTGGTGTAGAAAAGCTGAAGATCAGATCCAGCCACAAGGCAAAATCATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCCTTAGGCTATCTTTTTGGTAAGGATGATCAACCCAGAAAGCCTCAAGTTTCCAAAGTTGTTCTTCCTCCTCCTTATGGAATTGATCTCAACCCTGATGATAATAACAATAATCCTTCTCCCTTTCCGAAACAACTTCTTTCCAACAATTATCCTCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACGGTAAACAACTTTCTAATCCGTTCTTTGAATTGATTTTAAATCTGGATATGGATTTCAAATGAATTTTGTTGTTAATTAATCATATACAGTCTATTTTAGATAGAAAATTTTACATTAAAAGATTCTAATTTCTAACATGAATTACGATGAGATTTAAAATCATTTATTGAACTTTGAATCAGGATCGTCCATCAACCAAGGTGAAATCTGCTCCGGGTGGTGATTCGTCGCTAGGGTATCTGTTTGGAGATAAGTGAAATATTAATATCTATGTCTTCAGATATACTCTCTCTCTAGCTGACTATATTGGGAAGGAAATTCTAAAGGGTATGCTTTAGTGTGAGTGGTTTTTCTAAATAAAATGTGTGCAATTATTATGTAGTACTTGAAAGGAACATATATATGTATTTGAGAATTTGTG

mRNA sequence

ATGGATATATATGCGAGGACAATTATCACCATTGGTATGAGAAAAGCTGAAGATCAGATCCAGCCACAAGGCAAAATCATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCCTTAGGCTATCTTTTTGGTAAGGATGATCAACCCAGAAAGCCTCAAGTTTCCAAAGTTGTTCTTCCTCCTCCTTATGGAATTGATCTCAACCCTGATGATAATAACAATAATCCTTCTCCCTTTCCGAAACAACTTCTTTCCAACAATTATCCTCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCTCCGGGTGGTGATTCGTCGCTAGGGTATCTGTTTGGAGATAAGTGAAATATTAATATCTATGTCTTCAGATATACTCTCTCTCTAGCTGACTATATTGGGAAGGAAATTCTAAAGGGTATGCTTTAGTGTGAGTGGTTTTTCTAAATAAAATGTGTGCAATTATTATGTAGTACTTGAAAGGAACATATATATGTATTTGAGAATTTGTG

Coding sequence (CDS)

ATGGATATATATGCGAGGACAATTATCACCATTGGTATGAGAAAAGCTGAAGATCAGATCCAGCCACAAGGCAAAATCATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCCTTAGGCTATCTTTTTGGTAAGGATGATCAACCCAGAAAGCCTCAAGTTTCCAAAGTTGTTCTTCCTCCTCCTTATGGAATTGATCTCAACCCTGATGATAATAACAATAATCCTTCTCCCTTTCCGAAACAACTTCTTTCCAACAATTATCCTCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCTCCGGGTGGTGATTCGTCGCTAGGGTATCTGTTTGGAGATAAGTGA

Protein sequence

MDIYARTIITIGMRKAEDQIQPQGKIMSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

Homology

[Close]

BLAST of ClCG07G008200 vs. NCBI nr
Match: XP_038883008.1 (protein SPIRAL1-like 5 [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD-NNNNPSPFPKQLL 86
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD NNNNPSP PKQL+
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNNPSPSPKQLV 60

Query: 87  SNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           SNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101

[Close]

BLAST of ClCG07G008200 vs. NCBI nr
Match: XP_004146520.1 (protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_015032 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 96/100 (96.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLS 86
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD+NNNPSP PKQL+S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVS 60

Query: 87  -NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 126
            NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of ClCG07G008200 vs. NCBI nr
Match: XP_008452039.1 (PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa] >TYK16640.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa])

HSP 1 Score: 191.8 bits (486), Expect = 3.5e-45
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP-DDNNNNPSPFPKQLL 86
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP DD++NNPSP PKQL+
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 87  S-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of ClCG07G008200 vs. NCBI nr
Match: XP_022136791.1 (protein SPIRAL1-like 5 [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 3.0e-44
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLS 86
           MSRGGSYGGGRSSLGYLFG DDQP KPQVS+V+LPPPYGID++PDD +NNPSP PKQL+S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSRVILPPPYGIDISPDDQSNNPSPSPKQLVS 60

Query: 87  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFLTDRPSTKVKSAPGXDSSLGYLFGDK 100

[Close]

BLAST of ClCG07G008200 vs. NCBI nr
Match: XP_022941576.1 (protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like 5 [Cucurbita maxima] >XP_023545276.1 protein SPIRAL1-like 5 [Cucurbita pepo subsp. pepo] >KAG6600565.1 Protein SPIRAL1-like 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031205.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.0 bits (476), Expect = 5.1e-44
Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLS 86
           MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD  NNPSP PKQ  S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD-QNNPSPSPKQAAS 60

Query: 87  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of ClCG07G008200 vs. ExPASy Swiss-Prot
Match: Q8LGD1 (Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-26
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDNNNNPSPFPKQL 86
           MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D   +D+  +  P   ++
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPAPPYGVDSTEEDHEADQKP---KI 60

Query: 87  LSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
            +NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  SNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of ClCG07G008200 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.6e-18
Identity = 55/114 (48.25%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPR---KPQVSKVVLPPPYGI-------------DLNP 86
           MSRGGS GGG+SSLGYLFG ++ P+   KP  +    P P                    
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 87  DDNNNNPSPFPKQLLSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 125
           D     P+       +NNY RA GQN+GNF+TDRPSTKV +APGG SSLGYLFG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

[Close]

BLAST of ClCG07G008200 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-17
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDNNNNPS 86
           M RG S GGG+SSLGYLFG  + P+   V+K           PP      N  D+     
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 87  PFPKQLLSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 125
                  +NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of ClCG07G008200 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-16
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPP----PYGIDLNPDDNNNNPSPFPK 86
           M RG S GGG+SSLGYLFG  + P KP ++    P     P   D +P           K
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISADPSPKHVAAQTVNVTK 60

Query: 87  QL-------LSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 125
           Q+        +NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of ClCG07G008200 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 50/100 (50.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLS 86
           M RG S GGG+SSLGYLFG  + P+  +    V  P       P  +       P  + S
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAPKSAEKPAPVQKPA------PSSSAEKLKEIPAGIQS 60

Query: 87  ---NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF 124
              NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Sbjct: 61  SKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLF 94

[Close]

BLAST of ClCG07G008200 vs. ExPASy TrEMBL
Match: A0A0A0KUV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.0e-47
Identity = 96/100 (96.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLS 86
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDD+NNNPSP PKQL+S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVS 60

Query: 87  -NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 126
            NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of ClCG07G008200 vs. ExPASy TrEMBL
Match: A0A5D3CZ49 (Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004680 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.7e-45
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP-DDNNNNPSPFPKQLL 86
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP DD++NNPSP PKQL+
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 87  S-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of ClCG07G008200 vs. ExPASy TrEMBL
Match: A0A1S3BTQ0 (protein SPIRAL1-like 5 OS=Cucumis melo OX=3656 GN=LOC103493166 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.7e-45
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP-DDNNNNPSPFPKQLL 86
           MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNP DD++NNPSP PKQL+
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 87  S-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of ClCG07G008200 vs. ExPASy TrEMBL
Match: A0A6J1C4I1 (protein SPIRAL1-like 5 OS=Momordica charantia OX=3673 GN=LOC111008404 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLS 86
           MSRGGSYGGGRSSLGYLFG DDQP KPQVS+V+LPPPYGID++PDD +NNPSP PKQL+S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSRVILPPPYGIDISPDDQSNNPSPSPKQLVS 60

Query: 87  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFLTDRPSTKVKSAPGXDSSLGYLFGDK 100

[Close]

BLAST of ClCG07G008200 vs. ExPASy TrEMBL
Match: A0A6J1J7K0 (protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44
Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSPFPKQLLS 86
           MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD  NNPSP PKQ  S
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD-QNNPSPSPKQAAS 60

Query: 87  NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
           NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of ClCG07G008200 vs. TAIR 10
Match: AT4G23496.1 (SPIRAL1-like5 )

HSP 1 Score: 117.9 bits (294), Expect = 6.1e-27
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQ-PRKPQVSKVVLP-PPYGIDLNPDDNNNNPSPFPKQL 86
           MSRGGS+GGG+SSLGYLFG D++ P+ P       P PPYG+D   +D+  +  P   ++
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPAPPYGVDSTEEDHEADQKP---KI 60

Query: 87  LSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 127
            +NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  SNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of ClCG07G008200 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDNNNNPS 86
           M RG S GGG+SSLGYLFG  + P+   V+K           PP      N  D+     
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 87  PFPKQLLSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 125
                  +NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of ClCG07G008200 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 54/106 (50.94%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVV--------LPPPYGIDLNPDDNNNNPS 86
           M RG S GGG+SSLGYLFG  + P+   V+K           PP      N  D+     
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 87  PFPKQLLSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 125
                  +NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of ClCG07G008200 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-17
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPP----PYGIDLNPDDNNNNPSPFPK 86
           M RG S GGG+SSLGYLFG  + P KP ++    P     P   D +P           K
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISADPSPKHVAAQTVNVTK 60

Query: 87  QL-------LSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 125
           Q+        +NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of ClCG07G008200 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 56/124 (45.16%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 27  MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNPSP------- 86
           M RG S GGG+SSL YLFG D    KP    V  P P      P ++NN P+P       
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKP----VPAPRP-----APTESNNGPAPPVTAVTA 60

Query: 87  --------------FPKQLLS------NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSL 124
                           KQ+ +      NNY RA GQN+GNF+TDRPSTKV +APGG SSL
Sbjct: 61  TALTTATTSVEPAELNKQIPAGIKTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSL 115

The following BLAST results are available for this feature:

BLAST of ClCG07G008200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883008.1	1.0e-47	97.03	protein SPIRAL1-like 5 [Benincasa hispida]	[more]
XP_004146520.1	1.4e-46	96.00	protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_01...	[more]
XP_008452039.1	3.5e-45	94.12	PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-l...	[more]
XP_022136791.1	3.0e-44	88.00	protein SPIRAL1-like 5 [Momordica charantia]	[more]
XP_022941576.1	5.1e-44	91.00	protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like...	[more]

BLAST of ClCG07G008200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD1	8.5e-26	59.80	Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1	[more]
Q7Y1L9	8.6e-18	48.25	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
Q9LE54	2.5e-17	50.94	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
B3H4F1	2.1e-16	49.54	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q2QQ99	1.8e-15	50.00	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]

BLAST of ClCG07G008200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUV0	7.0e-47	96.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1	[more]
A0A5D3CZ49	1.7e-45	94.12	Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3BTQ0	1.7e-45	94.12	protein SPIRAL1-like 5 OS=Cucumis melo OX=3656 GN=LOC103493166 PE=3 SV=1	[more]
A0A6J1C4I1	1.5e-44	88.00	protein SPIRAL1-like 5 OS=Momordica charantia OX=3673 GN=LOC111008404 PE=3 SV=1	[more]
A0A6J1J7K0	2.5e-44	91.00	protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1	[more]

BLAST of ClCG07G008200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23496.1	6.1e-27	59.80	SPIRAL1-like5	[more]
AT1G69230.1	1.8e-18	50.94	SPIRAL1-like2	[more]
AT1G69230.2	1.8e-18	50.94	SPIRAL1-like2	[more]
AT1G26355.1	1.5e-17	49.54	SPIRAL1-like1	[more]
AT2G03680.1	1.1e-15	45.16	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..106
None	No IPR available	PANTHER	PTHR33403:SF19	PROTEIN SPIRAL1-LIKE 5	coord: 27..126
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 27..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G008200.1	ClCG07G008200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis