Homology
BLAST of ClCG07G006760 vs. NCBI nr
Match:
AHM89856.1 (RNA polymerase beta subunit [Lagenaria siceraria])
HSP 1 Score: 297.7 bits (761), Expect = 6.1e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. NCBI nr
Match:
YP_009753166.1 (RNA polymerase subunit beta [Trichosanthes truncata] >QIT06238.1 RNA polymerase subunit beta [Trichosanthes truncata])
HSP 1 Score: 297.7 bits (761), Expect = 6.1e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. NCBI nr
Match:
YP_009752827.1 (RNA polymerase subunit beta [Baijiania yunnanensis] >QIT05899.1 RNA polymerase subunit beta [Baijiania yunnanensis])
HSP 1 Score: 297.7 bits (761), Expect = 6.1e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. NCBI nr
Match:
AHM88854.1 (RNA polymerase beta subunit, partial [Lagenaria siceraria])
HSP 1 Score: 297.7 bits (761), Expect = 6.1e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 827 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 886
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 887 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 946
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 947 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 977
BLAST of ClCG07G006760 vs. NCBI nr
Match:
QJR52948.1 (RNA polymerase beta subunit [Herpetospermum pedunculosum])
HSP 1 Score: 297.7 bits (761), Expect = 6.1e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. ExPASy Swiss-Prot
Match:
Q4VZP1 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3 SV=2)
HSP 1 Score: 297.7 bits (761), Expect = 8.0e-80
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. ExPASy Swiss-Prot
Match:
A4QJA7 (DNA-directed RNA polymerase subunit beta OS=Aethionema cordifolium OX=434059 GN=rpoB PE=3 SV=1)
HSP 1 Score: 290.0 bits (741), Expect = 1.7e-77
Identity = 141/151 (93.38%), Postives = 145/151 (96.03%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRK
Sbjct: 842 MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRK 901
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 902 LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 961
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Sbjct: 962 HGRSSGHYALVTQQPLRGRSKQGGQRVGEME 992
BLAST of ClCG07G006760 vs. ExPASy Swiss-Prot
Match:
A4QJJ1 (DNA-directed RNA polymerase subunit beta OS=Aethionema grandiflorum OX=72657 GN=rpoB PE=3 SV=1)
HSP 1 Score: 290.0 bits (741), Expect = 1.7e-77
Identity = 141/151 (93.38%), Postives = 145/151 (96.03%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRK
Sbjct: 842 MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRK 901
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 902 LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 961
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Sbjct: 962 HGRSSGHYALVTQQPLRGRSKQGGQRVGEME 992
BLAST of ClCG07G006760 vs. ExPASy Swiss-Prot
Match:
A4QK10 (DNA-directed RNA polymerase subunit beta OS=Arabis hirsuta OX=78191 GN=rpoB PE=3 SV=1)
HSP 1 Score: 290.0 bits (741), Expect = 1.7e-77
Identity = 141/151 (93.38%), Postives = 145/151 (96.03%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRK
Sbjct: 841 MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRK 900
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 901 LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 960
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Sbjct: 961 HGRSSGHYALVTQQPLRGRSKQGGQRVGEME 991
BLAST of ClCG07G006760 vs. ExPASy Swiss-Prot
Match:
P50546 (DNA-directed RNA polymerase subunit beta OS=Arabidopsis thaliana OX=3702 GN=rpoB PE=3 SV=4)
HSP 1 Score: 290.0 bits (741), Expect = 1.7e-77
Identity = 141/151 (93.38%), Postives = 145/151 (96.03%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRK
Sbjct: 841 MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRK 900
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 901 LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 960
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Sbjct: 961 HGRSSGHYALVTQQPLRGRSKQGGQRVGEME 991
BLAST of ClCG07G006760 vs. ExPASy TrEMBL
Match:
A0A218KG28 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus var. hardwickii OX=319220 GN=rpoB PE=3 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. ExPASy TrEMBL
Match:
A0A6H0ETN6 (DNA-directed RNA polymerase subunit beta OS=Trichosanthes kirilowii OX=3677 GN=rpoB PE=3 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. ExPASy TrEMBL
Match:
A0A1X9Q1B9 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. ExPASy TrEMBL
Match:
A0A249RZI0 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. cantalupensis OX=3658 GN=rpoB PE=3 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. ExPASy TrEMBL
Match:
A0A1S4ETZ9 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo OX=3656 GN=rpoB PE=3 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 146/151 (96.69%), Postives = 146/151 (96.69%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK
Sbjct: 839 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 898
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 899 LVFSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 958
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Sbjct: 959 HGRSSGHYALVTQQPLRGRAKQGGQRVGEME 989
BLAST of ClCG07G006760 vs. TAIR 10
Match:
ATCG00190.1 (RNA polymerase subunit beta )
HSP 1 Score: 290.0 bits (741), Expect = 1.2e-78
Identity = 141/151 (93.38%), Postives = 145/151 (96.03%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRK
Sbjct: 841 MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRK 900
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
LVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 901 LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 960
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
HGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Sbjct: 961 HGRSSGHYALVTQQPLRGRSKQGGQRVGEME 991
BLAST of ClCG07G006760 vs. TAIR 10
Match:
AT4G21710.1 (DNA-directed RNA polymerase family protein )
HSP 1 Score: 85.5 bits (210), Expect = 4.4e-17
Identity = 49/151 (32.45%), Postives = 73/151 (48.34%), Query Frame = 0
Query: 1 MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRK 60
MP+ G D++ NP +PSRM +GQ+ EC +G + + + PF + S+
Sbjct: 960 MPWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK- 1019
Query: 61 LVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKI 120
L++ Q FE R++ G T P + +G Y +L H VDDKI
Sbjct: 1020 ----ALHKCGYQMRG---FE-------RMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKI 1079
Query: 121 HGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
H R G ++T+Q GR++ GG R GEME
Sbjct: 1080 HSRGRGPVQILTRQPAEGRSRDGGLRFGEME 1095
BLAST of ClCG07G006760 vs. TAIR 10
Match:
AT5G45140.1 (nuclear RNA polymerase C2 )
HSP 1 Score: 82.0 bits (201), Expect = 4.9e-16
Identity = 53/164 (32.32%), Postives = 78/164 (47.56%), Query Frame = 0
Query: 2 PYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKL 61
P+ + G D++ NP G PSRM VG++ E AG R + F ER +
Sbjct: 936 PFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVET 995
Query: 62 VFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKIH 121
+ + L E Y K ++ G + P E + +G Y KL H V DK+H
Sbjct: 996 ISATLVEKGF----------SYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMH 1055
Query: 122 GRSSGHYALVTQQSLRGRAKQGGQRVGEMEE----AYASKLLLF 162
R SG ++T+Q G++K GG RVGEME AY + +L++
Sbjct: 1056 ARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIY 1089
BLAST of ClCG07G006760 vs. TAIR 10
Match:
AT1G29940.1 (nuclear RNA polymerase A2 )
HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 41/150 (27.33%), Postives = 64/150 (42.67%), Query Frame = 0
Query: 7 GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERY-----EQEASRKL 66
G D++ NP PSRM + + E GSL + PF + E+E+ L
Sbjct: 925 GMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFRDAVKKTNGEEESKSSL 984
Query: 67 VFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQPVIIGKPYILKLIHQVDDKIH 126
+ +L K+ + ++ G + + +G Y +L H V DK
Sbjct: 985 LVDDLGSMLKEKGF------NHYGTETLYSGYLGVELKCEIFMGPVYYQRLRHMVSDKFQ 1044
Query: 127 GRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
RS+G +T Q ++GR + GG R GEME
Sbjct: 1045 VRSTGQVDQLTHQPIKGRKRGGGIRFGEME 1068
BLAST of ClCG07G006760 vs. TAIR 10
Match:
AT3G23780.1 (nuclear RNA polymerase D2A )
HSP 1 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 41/161 (25.47%), Postives = 73/161 (45.34%), Query Frame = 0
Query: 2 PYLQNGRPVDMVFNPLGVPSRMNVGQIFECSL--GLAGSLLDRHYRIVPFDERYEQEASR 61
P+ G D+V NP PSR GQ+ E +L G+A + Q+
Sbjct: 934 PFTIQGIVPDIVINPHAFPSRQTPGQLLEAALSKGIACPI---------------QKEGS 993
Query: 62 KLVFSELYEASKQTASPWVFE-PEYLQKS--------RIFYGRTRNPFEQPVIIGKPYIL 121
+++L + ++P V E E L ++ R++ GR+ + +G +
Sbjct: 994 SAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQ 1053
Query: 122 KLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME 152
+L+H +DK+ R++G +T+Q + R + GG + GEME
Sbjct: 1054 RLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 1079
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AHM89856.1 | 6.1e-77 | 96.69 | RNA polymerase beta subunit [Lagenaria siceraria] | [more] |
YP_009753166.1 | 6.1e-77 | 96.69 | RNA polymerase subunit beta [Trichosanthes truncata] >QIT06238.1 RNA polymerase ... | [more] |
YP_009752827.1 | 6.1e-77 | 96.69 | RNA polymerase subunit beta [Baijiania yunnanensis] >QIT05899.1 RNA polymerase s... | [more] |
AHM88854.1 | 6.1e-77 | 96.69 | RNA polymerase beta subunit, partial [Lagenaria siceraria] | [more] |
QJR52948.1 | 6.1e-77 | 96.69 | RNA polymerase beta subunit [Herpetospermum pedunculosum] | [more] |
Match Name | E-value | Identity | Description | |
Q4VZP1 | 8.0e-80 | 96.69 | DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3... | [more] |
A4QJA7 | 1.7e-77 | 93.38 | DNA-directed RNA polymerase subunit beta OS=Aethionema cordifolium OX=434059 GN=... | [more] |
A4QJJ1 | 1.7e-77 | 93.38 | DNA-directed RNA polymerase subunit beta OS=Aethionema grandiflorum OX=72657 GN=... | [more] |
A4QK10 | 1.7e-77 | 93.38 | DNA-directed RNA polymerase subunit beta OS=Arabis hirsuta OX=78191 GN=rpoB PE=3... | [more] |
P50546 | 1.7e-77 | 93.38 | DNA-directed RNA polymerase subunit beta OS=Arabidopsis thaliana OX=3702 GN=rpoB... | [more] |
Match Name | E-value | Identity | Description | |
A0A218KG28 | 3.0e-77 | 96.69 | DNA-directed RNA polymerase subunit beta OS=Cucumis sativus var. hardwickii OX=3... | [more] |
A0A6H0ETN6 | 3.0e-77 | 96.69 | DNA-directed RNA polymerase subunit beta OS=Trichosanthes kirilowii OX=3677 GN=r... | [more] |
A0A1X9Q1B9 | 3.0e-77 | 96.69 | DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3... | [more] |
A0A249RZI0 | 3.0e-77 | 96.69 | DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. cantalupensis OX=3... | [more] |
A0A1S4ETZ9 | 3.0e-77 | 96.69 | DNA-directed RNA polymerase subunit beta OS=Cucumis melo OX=3656 GN=rpoB PE=3 SV... | [more] |