ClCG07G006420 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G006420
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	MLP-like protein 43
Location	CG_Chr07: 11313977 .. 11314794 (-)
RNA-Seq Expression	ClCG07G006420
Synteny	ClCG07G006420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCCTCTGAATGGCGGTCCTCTAATTGGGTAGGTAAAATTGAAAATGTGGCGATTCTCTAAACGGCGTGCAACTCCCCCTTCTTAGACGAACGATGGACTGAACGTGGGTCGTGGGTTTTGCGTAGGTCTTGGGTGAGTGAAAGTGTGGGAATGAGGGTAAAAGGAAATAGAGGTGAGAGTGAAGAAGGAAATGAAAAAGGGATGAAAAAAAAGGGGAAAAGAAAATGTGGGAAAAATGAATGTGGGGTAGGGTTTGAAAAAAGAGTAAGAAAAAAAAAAAGAAAATGTGGGATTTAAATAGCTTTTGCTCACACATTTCTCGTTGACAGATACTGAAATTCTCTGCCCACGCAACTTGAATAGGCAGAAACTAAAACTCACGTTCGCAAAAGTTTTTACTCCACGCATATATTCAATTAGTGTCCAATATATAATTAGTGACCTATATTCAATATGCATAATAAGTGGAAGTATAATTAGTGACCTATATTCAATATGCATAATAAGTGGAAGTTTAGAGAGCTATTAGAAATATTTTAAAGGTCATGGGCCATTGGGTATAATCTTGAAAGTGAGAAAAATTGAAATTGTAATTTAACATTTAGAAATTATAGTGTGGATACTAATTTGATGTATTGCTAAATCACAGAAGGAAAAGCTAAAGTAGTAAAGCAGGTAATTGAAGCTGTGGATGAGGTGAAGAATATGATAGTTTTCAGAACGATTGAAGGAGACCTTATGGAGCATCATAAAGAATTCAAGTTTATAATGCAAATTTCTCCAAAGGACAAGGGAAGTGTGGTTCATTGA

mRNA sequence

ATGGAAGCTCCTCTGAATGGCGGTCCTCTAATTGGGTCTTGGGTGAGTGAAAGTGTGGGAATGAGGGTAAAAGGAAATAGAGAAGGAAAAGCTAAAGTAGTAAAGCAGGTAATTGAAGCTGTGGATGAGGTGAAGAATATGATAGTTTTCAGAACGATTGAAGGAGACCTTATGGAGCATCATAAAGAATTCAAGTTTATAATGCAAATTTCTCCAAAGGACAAGGGAAGTGTGGTTCATTGA

Coding sequence (CDS)

ATGGAAGCTCCTCTGAATGGCGGTCCTCTAATTGGGTCTTGGGTGAGTGAAAGTGTGGGAATGAGGGTAAAAGGAAATAGAGAAGGAAAAGCTAAAGTAGTAAAGCAGGTAATTGAAGCTGTGGATGAGGTGAAGAATATGATAGTTTTCAGAACGATTGAAGGAGACCTTATGGAGCATCATAAAGAATTCAAGTTTATAATGCAAATTTCTCCAAAGGACAAGGGAAGTGTGGTTCATTGA

Protein sequence

MEAPLNGGPLIGSWVSESVGMRVKGNREGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH

Homology

[Close]

BLAST of ClCG07G006420 vs. NCBI nr
Match: XP_038893059.1 (MLP-like protein 31 [Benincasa hispida])

HSP 1 Score: 80.5 bits (197), Expect = 7.3e-12
Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 28  EGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           EGKAKV KQVIEAVDE KN+IV + IEGDLM+ +K FKFIMQ +PK KGSVVH
Sbjct: 64  EGKAKVAKQVIEAVDEEKNLIVLKMIEGDLMKDYKNFKFIMQATPKGKGSVVH 116

[Close]

BLAST of ClCG07G006420 vs. NCBI nr
Match: XP_038892978.1 (MLP-like protein 43 [Benincasa hispida])

HSP 1 Score: 80.5 bits (197), Expect = 7.3e-12
Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 19  VGMRVKGN--REGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKG 78
           VG  V  N   EGKA V K VIE VDE KN+IVF+TIEGDLMEH+K F FI+Q +PK KG
Sbjct: 53  VGSIVSWNYFHEGKANVAKTVIETVDEEKNLIVFKTIEGDLMEHYKTFNFIVQATPKGKG 112

Query: 79  SVVH 81
           SVVH
Sbjct: 113 SVVH 116

[Close]

BLAST of ClCG07G006420 vs. NCBI nr
Match: XP_022155376.1 (MLP-like protein 28 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 8.1e-11
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 29  GKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           GK +V KQVIEAVDE KN+I F+ IEGD+M+H+K FKF MQ +PK KGSVVH
Sbjct: 226 GKPEVAKQVIEAVDEEKNLITFKMIEGDIMDHYKNFKFTMQATPKGKGSVVH 277

[Close]

BLAST of ClCG07G006420 vs. NCBI nr
Match: XP_022155190.1 (MLP-like protein 43 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 8.1e-11
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 29  GKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           GK +V KQVIEAVDE KN+I F+ IEGD+M+H+K FKF MQ +PK KGSVVH
Sbjct: 64  GKPEVAKQVIEAVDEEKNLITFKMIEGDIMDHYKNFKFTMQATPKGKGSVVH 115

[Close]

BLAST of ClCG07G006420 vs. NCBI nr
Match: XP_028752529.1 (MLP-like protein 28 [Prosopis alba])

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 28  EGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           +GK  V K VIEAVD  KN+I+FR IEGDL++H+K FKFI+Q+SPK KGSV H
Sbjct: 63  DGKEGVAKDVIEAVDSAKNLIIFRVIEGDLLKHYKSFKFIIQVSPKAKGSVAH 115

[Close]

BLAST of ClCG07G006420 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-08
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 12  GSWVSESVGMRVKGN--REGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQ 71
           G W   +VG  V  N   +G+AKV K+ IEAVD  KN+I FR IEGDLM+ +K F   +Q
Sbjct: 209 GDW--GTVGSIVFWNYVHDGEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQ 268

Query: 72  ISPK--DKGSVVH 81
           ++PK    GSVVH
Sbjct: 269 VTPKHGGSGSVVH 279

[Close]

BLAST of ClCG07G006420 vs. ExPASy Swiss-Prot
Match: Q9SSK9 (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.7e-08
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 12  GSWVSESVGMRVKGN--REGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQ 71
           G W   +VG  V  N   +G+AKV K+ IEAV+  KN+I FR IEGDLM+ +K F   +Q
Sbjct: 66  GDW--GTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQ 125

Query: 72  ISPK--DKGSVVH 81
           ++PK    GS+VH
Sbjct: 126 VTPKPGGPGSIVH 136

[Close]

BLAST of ClCG07G006420 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 8.7e-08
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 28  EGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPK--DKGSVVH 81
           +G+AKV K+ IEAV+  KN+I FR IEGDL++ +K F   +Q++PK    GSVVH
Sbjct: 80  DGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVH 134

[Close]

BLAST of ClCG07G006420 vs. ExPASy Swiss-Prot
Match: Q9SSK5 (MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 28  EGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPK--DKGSVVH 81
           +GK  V K  IEAVD  KN+I F+ +EGDLM  +K F F +Q++PK  + GS+ H
Sbjct: 67  DGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAH 121

[Close]

BLAST of ClCG07G006420 vs. ExPASy Swiss-Prot
Match: P85524 (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-05
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 10  LIGSWVSESVGMRVKGNREGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQ 69
           L G+W +    +  K   +GK K  K ++EA+DE    + F+ +EGDLME +K F  I+Q
Sbjct: 45  LEGNWGTVGSVIFFKYTIDGKEKTAKDIVEAIDEETKSVTFKIVEGDLMELYKTFIIIVQ 104

Query: 70  ISPKDKGSVV 80
           +  K + + V
Sbjct: 105 VDTKGEHNSV 114

[Close]

BLAST of ClCG07G006420 vs. ExPASy TrEMBL
Match: A0A6J1DLR2 (MLP-like protein 43 OS=Momordica charantia OX=3673 GN=LOC111022325 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.9e-11
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 29  GKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           GK +V KQVIEAVDE KN+I F+ IEGD+M+H+K FKF MQ +PK KGSVVH
Sbjct: 64  GKPEVAKQVIEAVDEEKNLITFKMIEGDIMDHYKNFKFTMQATPKGKGSVVH 115

[Close]

BLAST of ClCG07G006420 vs. ExPASy TrEMBL
Match: A0A6J1DRI4 (MLP-like protein 28 OS=Momordica charantia OX=3673 GN=LOC111022522 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.9e-11
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 29  GKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           GK +V KQVIEAVDE KN+I F+ IEGD+M+H+K FKF MQ +PK KGSVVH
Sbjct: 226 GKPEVAKQVIEAVDEEKNLITFKMIEGDIMDHYKNFKFTMQATPKGKGSVVH 277

[Close]

BLAST of ClCG07G006420 vs. ExPASy TrEMBL
Match: A0A6J1C8L4 (kirola-like OS=Momordica charantia OX=3673 GN=LOC111009302 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.7e-10
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 29  GKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           GKA VVK++IEA+DE KN+I F+ I+GD+ EH+K FKF MQ  PK KGSVVH
Sbjct: 106 GKACVVKELIEAIDEEKNLITFKVIDGDISEHYKSFKFTMQCIPKKKGSVVH 157

[Close]

BLAST of ClCG07G006420 vs. ExPASy TrEMBL
Match: A0A6J1FST2 (MLP-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111446971 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.4e-10
Identity = 33/53 (62.26%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 28  EGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDKGSVVH 81
           +GKA+V + +IEAV++ +N+IVFR I+GDL+E+HKEFKF MQ +PK KGS+VH
Sbjct: 63  DGKARVSEHLIEAVNDDENLIVFRVIDGDLLENHKEFKFTMQATPKGKGSMVH 115

[Close]

BLAST of ClCG07G006420 vs. ExPASy TrEMBL
Match: A0A2P5F9J7 (Major latex protein domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_097050 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 28  EGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPKDK---GSVVH 81
           EGKAKV K+++EA+DE KN+I F+ IEGDLMEH+K  KF +Q +PK +   GSV+H
Sbjct: 67  EGKAKVAKEIVEAIDEEKNLITFKVIEGDLMEHYKSIKFTIQATPKSEGQLGSVIH 122

[Close]

BLAST of ClCG07G006420 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 )

HSP 1 Score: 60.1 bits (144), Expect = 9.5e-10
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 12  GSWVSESVGMRVKGN--REGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQ 71
           G W   +VG  V  N   +G+AKV K+ IEAVD  KN+I FR IEGDLM+ +K F   +Q
Sbjct: 209 GDW--GTVGSIVFWNYVHDGEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQ 268

Query: 72  ISPK--DKGSVVH 81
           ++PK    GSVVH
Sbjct: 269 VTPKHGGSGSVVH 279

[Close]

BLAST of ClCG07G006420 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 )

HSP 1 Score: 60.1 bits (144), Expect = 9.5e-10
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 12  GSWVSESVGMRVKGN--REGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQ 71
           G W   +VG  V  N   +G+AKV K+ IEAVD  KN+I FR IEGDLM+ +K F   +Q
Sbjct: 209 GDW--GTVGSIVFWNYVHDGEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQ 268

Query: 72  ISPK--DKGSVVH 81
           ++PK    GSVVH
Sbjct: 269 VTPKHGGSGSVVH 279

[Close]

BLAST of ClCG07G006420 vs. TAIR 10
Match: AT1G70850.2 (MLP-like protein 34 )

HSP 1 Score: 57.8 bits (138), Expect = 4.7e-09
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 12  GSWVSESVGMRVKGN--REGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQ 71
           G W   +VG  V  N   +G+AKV K+ IEAV+  KN+I FR IEGDLM+ +K F   +Q
Sbjct: 53  GDW--GTVGSIVFWNYVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQ 112

Query: 72  ISPK--DKGSVVH 81
           ++PK    GS+VH
Sbjct: 113 VTPKHGGPGSIVH 123

[Close]

BLAST of ClCG07G006420 vs. TAIR 10
Match: AT1G70830.2 (MLP-like protein 28 )

HSP 1 Score: 57.4 bits (137), Expect = 6.2e-09
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 12  GSWVSESVGMRVKGN--REGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQ 71
           G W   +VG  V  N   +G+AKV K+ IEAV+  KN+I FR IEGDLM+ +K F   +Q
Sbjct: 66  GDW--GTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQ 125

Query: 72  ISPK--DKGSVVH 81
           ++PK    GS+VH
Sbjct: 126 VTPKPGGPGSIVH 136

[Close]

BLAST of ClCG07G006420 vs. TAIR 10
Match: AT1G70840.1 (MLP-like protein 31 )

HSP 1 Score: 57.4 bits (137), Expect = 6.2e-09
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 28  EGKAKVVKQVIEAVDEVKNMIVFRTIEGDLMEHHKEFKFIMQISPK--DKGSVVH 81
           +G+AKV K+ IEAV+  KN+I FR IEGDL++ +K F   +Q++PK    GSVVH
Sbjct: 80  DGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVH 134

The following BLAST results are available for this feature:

BLAST of ClCG07G006420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893059.1	7.3e-12	75.47	MLP-like protein 31 [Benincasa hispida]	[more]
XP_038892978.1	7.3e-12	67.19	MLP-like protein 43 [Benincasa hispida]	[more]
XP_022155376.1	8.1e-11	69.23	MLP-like protein 28 [Momordica charantia]	[more]
XP_022155190.1	8.1e-11	69.23	MLP-like protein 43 [Momordica charantia]	[more]
XP_028752529.1	1.1e-10	66.04	MLP-like protein 28 [Prosopis alba]	[more]

BLAST of ClCG07G006420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSK7	1.3e-08	50.68	MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1	[more]
Q9SSK9	8.7e-08	47.95	MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1	[more]
Q941R6	8.7e-08	52.73	MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2	[more]
Q9SSK5	1.9e-07	49.09	MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1	[more]
P85524	1.4e-05	35.71	Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1	[more]

BLAST of ClCG07G006420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLR2	3.9e-11	69.23	MLP-like protein 43 OS=Momordica charantia OX=3673 GN=LOC111022325 PE=3 SV=1	[more]
A0A6J1DRI4	3.9e-11	69.23	MLP-like protein 28 OS=Momordica charantia OX=3673 GN=LOC111022522 PE=3 SV=1	[more]
A0A6J1C8L4	5.7e-10	65.38	kirola-like OS=Momordica charantia OX=3673 GN=LOC111009302 PE=3 SV=1	[more]
A0A6J1FST2	7.4e-10	62.26	MLP-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111446971 PE=3 SV=1	[more]
A0A2P5F9J7	1.6e-09	58.93	Major latex protein domain containing protein OS=Trema orientale OX=63057 GN=Tor...	[more]

BLAST of ClCG07G006420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70850.1	9.5e-10	50.68	MLP-like protein 34	[more]
AT1G70850.3	9.5e-10	50.68	MLP-like protein 34	[more]
AT1G70850.2	4.7e-09	47.95	MLP-like protein 34	[more]
AT1G70830.2	6.2e-09	47.95	MLP-like protein 28	[more]
AT1G70840.1	6.2e-09	52.73	MLP-like protein 31	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 28..79 e-value: 3.8E-13 score: 49.6
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 11..80 e-value: 8.3E-15 score: 57.0
None	No IPR available	PANTHER	PTHR31907:SF65	MLP-LIKE PROTEIN 31	coord: 27..80
None	No IPR available	PANTHER	PTHR31907	MLP-LIKE PROTEIN 423	coord: 27..80
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 34..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G006420.1	ClCG07G006420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response