ClCG07G006210 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG07G006210
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr07: 10606212 .. 10608225 (-)
RNA-Seq ExpressionClCG07G006210
SyntenyClCG07G006210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACAACGCTCAACAAGATATGAAGTGGAGAAACATGACACCAAGGTGACTTGTAAGAGCCTTTTAGATTGAGATGTGGCCAAACACAATCAGTCTCAAAGCAATCAATCAAAAATCAAATTATCAACAATCAATCTCAAAGCATAATACTTTGCGACAATAAGTGTGTGCCACATAACATCTCCATCGTTTAAAATTCTCCAAATCCATTTGTCAAAAGGGCCAAATTCCAATGTTGAAAGTTGTTGATGCCAATACCCCATCGATTTAGGAACCTATGTTGTTTTCCAATTAATAGTATGCATTCCACCTTCAACTCTAGAACCTTCCCAAAAAGAAATCACACAAGCTAATTCAAAGAATTGGAGGTCTTTCTTAAAAGTTTAAATAACATGTAATATATCGACATACTAAATAATGTAGCTTGGATAAGGGTATGCCTACCTCCTTTTGAAATAAATGCGGATTTCCAACCACTAAGCTTGTGCTGAATTTTCTCGAAAATAGGTTGCTAGAGAAATAAATGCATATTCCCAAGCATGAAGTTGTGCTAAATTTTTCTCTAAAACAGATTGCCATAACAATGTGTTCTTTGAATTACCCCCAAAAGGAAGCCCAAGATAGGTGGAGGCCATAAACCCAATTTACAACCAAAATCTGCCAACGACCAATCCTTTTTGCCTCATCAAGGTGGGTCCCCACAACTCACTCTTAGAAAGATTAATATTCAAACCAGAAGCCAACTCAAATATTCTCAAAATATCAAAAGGATGTTCCAAAGCTTGCAAATCAGAAGTATAAAACAACAGAATCGCAAGTGATTTAAGTAAGATTGAGACGCACCAATGGGATGGGTTGCAATCTTCCCCAACTGAGCACTATGAGATATTTTTAGAACTCAAGGACACAGTTGTACAACCTATAGAACAAATTCTGGGCAAGTAAGGTCGTGAGATATGCATTCCTAGGAAGGAGGATGTTTTCTAGCTCACTTCAAGATATGGATTCCTAGGAAGGAGGATGTTTTCTAGCTCACTTCAAGATATGGATTCCTCTCTGTACACCCTCTTTCCCTTTCACCATCTTTAACCCTTTCTTGTCCAACAGCATGTATCACCGTTTTCCCTCTCCCCTTCCATCCTTCACCATCAACAACAAGACCCTCTCCGTTGAGCTCAATCATGGCTTATGCATCACCAAGGCTTGGAAAGATAGATCCTTCACTAAACTAACTTTTTTTTTCCTTAAAGGAAATAGCGCTTTTCATTGATATAATGAATAGAGTCTAATGCTCGTAAATACAAGATCCCAAATAATAATGTTATCGCTCTATCTTTGAAAAAGGTGTCTCATTCATGGCTGGCCTCATGTTTCTAAACATTGATCGACGCCCCCCTCAACCAAAAGTTCTTCTAGAAATGTTGTCTTGATAAATATGATCCATGGGTTGAAAAGATCACCAGCGAGAAGGGACATTGTGCAAAAGTTGTTAAGCTTGGCATTAATGGAGGGTTTAACAAAGACATCGTCGCTGTGGCAAATGAGAAAAATAGATGGAATTTCTTCATCTCTCTTATTAAAGATTCCAACCAACCTTCCCCTGCAAACTGTACCAAGGTAGCTTATAAGGCAGTTTTTTTCTAAAACAAACAACAATTTGTTCGCCATGATTGACCACCCTCCATTCTCTCCAACAATTTGTTCGCCATAAGTGGTTTGACATCCTCTATGCTGGTCACCATCTATGGATTGATTAGTTCCTTACAACCAAACAAAGACATCCTTGATGTGGGGAAAGCAAAGAACAAGGGCAAACATTTTGCATCCATCATCAAAGGTTGGTACCAAGTTGGAAAATATGTTAAAGTTTGAACGGTGGAGTACTGAGGCTTTTTACAGAGACATAAAGGTTCCTGGGGGTTGGATAAAAATTCGTAATTTACCAATTGAGAGGTCTTTTGACACTTCCAAGCTTATAGGATATCTTTGTGGTGGCTACATTGAGACTTCATAG

mRNA sequence

GCACAACGCTCAACAAGATATGAAGTGGAGAAACATGACACCAAGAAGCCAACTCAAATATTCTCAAAATATCAAAAGGATGTTCCAAAGCTTGCAAATCAGAAGTATAAAACAACAGAATCGCAAATCACCAGCGAGAAGGGACATTGTGCAAAAGTTGTTAAGCTTGGCATTAATGGAGGGTTTAACAAAGACATCGTCGCTGTGGCAAATGAGAAAAATAGATGGAATTTCTTCATCTCTCTTATTAAAGATTCCAACCAACCTTCCCCTGCAAACTGTACCAAGACATCCTTGATGTGGGGAAAGCAAAGAACAAGGGCAAACATTTTGCATCCATCATCAAAGGTTGGTACCAAGTTGGAAAATATGTTAAAGTTTGAACGGTGGAGTACTGAGGCTTTTTACAGAGACATAAAGGTTCCTGGGGGTTGGATAAAAATTCGTAATTTACCAATTGAGAGGTCTTTTGACACTTCCAAGCTTATAGGATATCTTTGTGGTGGCTACATTGAGACTTCATAG

Coding sequence (CDS)

GCACAACGCTCAACAAGATATGAAGTGGAGAAACATGACACCAAGAAGCCAACTCAAATATTCTCAAAATATCAAAAGGATGTTCCAAAGCTTGCAAATCAGAAGTATAAAACAACAGAATCGCAAATCACCAGCGAGAAGGGACATTGTGCAAAAGTTGTTAAGCTTGGCATTAATGGAGGGTTTAACAAAGACATCGTCGCTGTGGCAAATGAGAAAAATAGATGGAATTTCTTCATCTCTCTTATTAAAGATTCCAACCAACCTTCCCCTGCAAACTGTACCAAGACATCCTTGATGTGGGGAAAGCAAAGAACAAGGGCAAACATTTTGCATCCATCATCAAAGGTTGGTACCAAGTTGGAAAATATGTTAAAGTTTGAACGGTGGAGTACTGAGGCTTTTTACAGAGACATAAAGGTTCCTGGGGGTTGGATAAAAATTCGTAATTTACCAATTGAGAGGTCTTTTGACACTTCCAAGCTTATAGGATATCTTTGTGGTGGCTACATTGAGACTTCATAG

Protein sequence

AQRSTRYEVEKHDTKKPTQIFSKYQKDVPKLANQKYKTTESQITSEKGHCAKVVKLGINGGFNKDIVAVANEKNRWNFFISLIKDSNQPSPANCTKTSLMWGKQRTRANILHPSSKVGTKLENMLKFERWSTEAFYRDIKVPGGWIKIRNLPIERSFDTSKLIGYLCGGYIETS
Homology
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BLAST of ClCG07G006210 vs. NCBI nr
Match: QWT43305.1 (kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-04
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 138 DIKVP--GGWIKIRNLPIER-SFDTSKLIGYLCGGYIETS 175
           D +VP  G WIKIRNL I++ S+DT KLIG LCGGYIETS
Sbjct: 237 DAQVPSYGSWIKIRNLLIDQWSYDTFKLIGELCGGYIETS 276

The following BLAST results are available for this feature:
BLAST of ClCG07G006210 vs. NCBI nr
Match NameE-valueIdentityDescription
QWT43305.15.5e-0470.00kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris][more]
BLAST of ClCG07G006210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG07G006210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG07G006210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G006210.1ClCG07G006210.1mRNA