ClCG07G002820 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G002820
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	BHLH domain-containing protein
Location	CG_Chr07: 2925123 .. 2926437 (-)
RNA-Seq Expression	ClCG07G002820
Synteny	ClCG07G002820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGTGCTGACGTAACCTTGCTGACATCCTCAAAATGACTTCGTTTCGCCACCTCTGTTGCCACTTTTCCACAGAGGTATATAATCTCCTTCCTTTGCTTCAGCCATTTCTGTAAACAAACACAAAACACTTCCCATTAATCCTCTTCATCTTCTTCATCTTCTTCATCAAATGTATCCCAATTTCCAATTCTCGGCTTCGTCTTCCTCGGCCGCCAAGATCGAACGTCGAATCGTAGAGAAAAACAGAAGAATTCAAATGAAAAACCTCTGTTTTAAGCTCAATTCCCTCCTCCCACATCATGATTCCAAGGTCTTTTCATATTCCCACATGAAAACTTCTCATTTTATTCTCTGTTTTTCTTCAACAAACTTTAATCTTAATTAACCAACACCCACCACCCATAATCTTAATTTGTTTCATAATTGTATGCAGGATGCTTCATTGGCATTGCCAGATCAGATTGATGAAGCAATTAAGTACATAAAAGAGCTGGAGAAGAAAGTAAATTCAGCTAAGGAGAAGAAAAATCAACTACAGAGGAAAAACAAGAGCTCCATAAATATAGATTCTTCTTCTTCATCAGCATCTCCTCAGCTTAAAATCAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGATTGGATGATCAGTATCTCTTATCTGAAACTCTTCGTATTCTTCAAGAAGAAGGCATTGAAGTTGTCAGTGCAAGCTTCTCTCTTTCCCGGAACTCTGTTTTCCACACCATCCATGCACAAGTAATTTCGATTCTCTTCCGTTTGGGGTACCCAAAGCTTAAGTTGATTGAAAAAATAAAATAAAATAAAATAAAATATTGCAGGAGTTTGAATACGGACAAGATACAATCTTTTTATTAGTAATTGTAACGAGTTTTTCGTGTCTTGAACATACAGCTGGGGGATTCGATGGTCGAATTAGGAGCGACGAAAGCGACGGAGAGATTGAAGGGATTGGTTTATGGATCGAACAGCGACATAGAAGAGGAAAAGGAGAAGCAGTGGTGGGATGAACTTGCAACTGATAATGGGGATTTTTAAGTAAGCAGCCAAATTGCAAAGGCATTAAGTAAATGGAAGTGTTATGAAAGATTATGCTTAATCAAGTTAACAAATACACATATGAGGAAGAAAAAGAAAAGTACTGAAAAAGAAAAGAAAAGAGCAAAGTATTAGTTCTGAGAGTGTGCGACTTTACAACGAAGCACTTCCTGCGTATGAAACCTATTTTAGTCTATCTACTTTTGACTTTAGTTCATGAGATTTTAAAATGTTTATTTTAG

mRNA sequence

ATGGCTGCCATTTCTGTAAACAAACACAAAACACTTCCCATTAATCCTCTTCATCTTCTTCATCTTCTTCATCAAATGTATCCCAATTTCCAATTCTCGGCTTCGTCTTCCTCGGCCGCCAAGATCGAACGTCGAATCGTAGAGAAAAACAGAAGAATTCAAATGAAAAACCTCTGTTTTAAGCTCAATTCCCTCCTCCCACATCATGATTCCAAGGATGCTTCATTGGCATTGCCAGATCAGATTGATGAAGCAATTAAGTACATAAAAGAGCTGGAGAAGAAAGTAAATTCAGCTAAGGAGAAGAAAAATCAACTACAGAGGAAAAACAAGAGCTCCATAAATATAGATTCTTCTTCTTCATCAGCATCTCCTCAGCTTAAAATCAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGATTGGATGATCAGTATCTCTTATCTGAAACTCTTCGTATTCTTCAAGAAGAAGGCATTGAAGTTGTCAGTGCAAGCTTCTCTCTTTCCCGGAACTCTGTTTTCCACACCATCCATGCACAACTGGGGGATTCGATGGTCGAATTAGGAGCGACGAAAGCGACGGAGAGATTGAAGGGATTGGTTTATGGATCGAACAGCGACATAGAAGAGGAAAAGGAGAAGCAGTGGTGGGATGAACTTGCAACTGATAATGGGGATTTTTAAGTAAGCAGCCAAATTGCAAAGGCATTAAGTAAATGGAAGTGTTATGAAAGATTATGCTTAATCAAGTTAACAAATACACATATGAGGAAGAAAAAGAAAAGTACTGAAAAAGAAAAGAAAAGAGCAAAGTATTAGTTCTGAGAGTGTGCGACTTTACAACGAAGCACTTCCTGCGTATGAAACCTATTTTAGTCTATCTACTTTTGACTTTAGTTCATGAGATTTTAAAATGTTTATTTTAG

Coding sequence (CDS)

ATGGCTGCCATTTCTGTAAACAAACACAAAACACTTCCCATTAATCCTCTTCATCTTCTTCATCTTCTTCATCAAATGTATCCCAATTTCCAATTCTCGGCTTCGTCTTCCTCGGCCGCCAAGATCGAACGTCGAATCGTAGAGAAAAACAGAAGAATTCAAATGAAAAACCTCTGTTTTAAGCTCAATTCCCTCCTCCCACATCATGATTCCAAGGATGCTTCATTGGCATTGCCAGATCAGATTGATGAAGCAATTAAGTACATAAAAGAGCTGGAGAAGAAAGTAAATTCAGCTAAGGAGAAGAAAAATCAACTACAGAGGAAAAACAAGAGCTCCATAAATATAGATTCTTCTTCTTCATCAGCATCTCCTCAGCTTAAAATCAACCAAATGGGTAAAAGTTTAGAGATAGTTTTAAGCAGTGGATTGGATGATCAGTATCTCTTATCTGAAACTCTTCGTATTCTTCAAGAAGAAGGCATTGAAGTTGTCAGTGCAAGCTTCTCTCTTTCCCGGAACTCTGTTTTCCACACCATCCATGCACAACTGGGGGATTCGATGGTCGAATTAGGAGCGACGAAAGCGACGGAGAGATTGAAGGGATTGGTTTATGGATCGAACAGCGACATAGAAGAGGAAAAGGAGAAGCAGTGGTGGGATGAACTTGCAACTGATAATGGGGATTTTTAA

Protein sequence

MAAISVNKHKTLPINPLHLLHLLHQMYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIKELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLDDQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVYGSNSDIEEEKEKQWWDELATDNGDF

Homology

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BLAST of ClCG07G002820 vs. NCBI nr
Match: XP_038888628.1 (transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 5.1e-82
Identity = 171/206 (83.01%), Postives = 185/206 (89.81%), Query Frame = 0


Query: 26  MYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEA 85
           M PNFQFSASSSSAAKIERRI+EKNRR QMKNLC +LNSLLP+HDSKD SL LPDQIDEA
Sbjct: 1   MDPNFQFSASSSSAAKIERRIIEKNRRNQMKNLCSQLNSLLPNHDSKDISLPLPDQIDEA 60

Query: 86  IKYIKELEKKVNSAKEKKNQLQRKNKSSINID--SSSSSASPQLKINQMGKSLEIVLSSG 145
           IKYIKELEKKV+SAKEKKNQLQ KNKSSIN+D  SSSSSASPQL I+QMGKS+EIVLSSG
Sbjct: 61  IKYIKELEKKVSSAKEKKNQLQGKNKSSINMDSSSSSSSASPQLNIHQMGKSVEIVLSSG 120

Query: 146 LDDQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGL 205
           LD+QYL  ETLRILQEEG EV++ASFS+S NSVFHTIHAQLGDSMVE G TKATERLK L
Sbjct: 121 LDNQYLFCETLRILQEEGTEVINASFSVSGNSVFHTIHAQLGDSMVEFGVTKATERLKRL 180

Query: 206 VYGSNSDIEEEKEKQWWDELATDNGD 230
           VYGSNSD+E +KEKQWWDE   +N D
Sbjct: 181 VYGSNSDVEVQKEKQWWDEFPCENWD 206

[Close]

BLAST of ClCG07G002820 vs. NCBI nr
Match: KAA0031567.1 (transcription factor bHLH55-like [Cucumis melo var. makuwa] >TYK07018.1 transcription factor bHLH55-like [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-79
Identity = 166/204 (81.37%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 26  MYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEA 85
           M PNFQFSASSS+AAKIERRI+EKNRR QMKNLC +L SL+P  DSK+ SLALPDQID A
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 86  IKYIKELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLD 145
           IKYIK+LEKKVNSAKEKKN+LQ KNKS+IN+DSSSSS SPQLKINQMGKSLEIVLSSG+D
Sbjct: 61  IKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSS-SPQLKINQMGKSLEIVLSSGID 120

Query: 146 DQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVY 205
           +QYLL ETLRILQEEGIEVV+ASFS+S  SVFHTIHA+LGDSMVE G TKATERLK LVY
Sbjct: 121 NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY 180

Query: 206 GSNSDIEEEKEKQWWDELATDNGD 230
           GSNSD+E +KEKQWWDE  ++N D
Sbjct: 181 GSNSDVELQKEKQWWDEFPSENWD 203

[Close]

BLAST of ClCG07G002820 vs. NCBI nr
Match: XP_008455310.1 (PREDICTED: transcription factor bHLH55-like [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 1.5e-78
Identity = 164/203 (80.79%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 27  YPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAI 86
           YPNFQFSASSS+AAKIERRI+EKNRR QMKNLC +L SL+P   SK+ SLALPDQID AI
Sbjct: 3   YPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAI 62

Query: 87  KYIKELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLDD 146
           KYIK+LEKKVNSAKEKKN+LQ KNKS+IN+DSSSSS SPQLKINQMGKSLEIVLSSG+D+
Sbjct: 63  KYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSS-SPQLKINQMGKSLEIVLSSGIDN 122

Query: 147 QYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVYG 206
           QYLL ETLRILQEEGIEVV+ASFS+S  SVFHTIHA+LGDSMVE G TKATERLK LVYG
Sbjct: 123 QYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYG 182

Query: 207 SNSDIEEEKEKQWWDELATDNGD 230
           SNSD+E +KEKQWW+E  ++N D
Sbjct: 183 SNSDVELQKEKQWWEEFPSENWD 204

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BLAST of ClCG07G002820 vs. NCBI nr
Match: XP_011659708.1 (transcription factor bHLH162 [Cucumis sativus] >KGN43623.1 hypothetical protein Csa_020395 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 4.6e-75
Identity = 161/210 (76.67%), Postives = 183/210 (87.14%), Query Frame = 0


Query: 26  MYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEA 85
           M PNFQFSASSS+AAKIERRI+EKNRR QMKNLC +L SL+P  DSK+ SLALPDQID A
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 86  IKYIKELEKKVNSAKEKKNQLQRKNKSSINID----SSSSSASPQLKINQMGKSLEIVLS 145
           IKYIK+LEK+VNSAKEKKN+LQ KNKS+IN+D    SSSSS+SPQLKINQMGKSLEI+LS
Sbjct: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120

Query: 146 SGLDDQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLK 205
           SG D+QYLL ETLRIL+EEG EVVSASFS+S NSVFHTIHAQLGDSMVE G TKATERL 
Sbjct: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180

Query: 206 GLVYGSNSDIE-EEKEKQWWDELATDNGDF 231
            LVY SNSD+E +++EKQWW E  ++N +F
Sbjct: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210

[Close]

BLAST of ClCG07G002820 vs. NCBI nr
Match: XP_023531689.1 (transcription factor bHLH162-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 2.5e-73
Identity = 161/219 (73.52%), Postives = 185/219 (84.47%), Query Frame = 0


Query: 17  LHLLHL----LHQMYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSK 76
           LHLL L    LHQM  +FQFS SSSSAAKIERRIVEKNRR QMK LC +LNSLLP+ DSK
Sbjct: 33  LHLLLLLHRPLHQMDRHFQFSTSSSSAAKIERRIVEKNRRNQMKTLCSQLNSLLPNQDSK 92

Query: 77  DASLALPDQIDEAIKYIKELEKKVNSAKEKKNQLQRKNKSSINID-SSSSSASPQLKINQ 136
           + SLALPDQIDEA+KYIKELEKKVN AKEKK +L+ KNKSS+NI+ SSSSSASPQLKI+Q
Sbjct: 93  EISLALPDQIDEAVKYIKELEKKVNLAKEKKEKLEGKNKSSMNIESSSSSSASPQLKIHQ 152

Query: 137 MGKSLEIVLSSGLDDQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVEL 196
            G+SLEI+LSSGLD+QYL SET+ ILQEEG+EVV+ASFS+S +SVF T HAQL  SM+E 
Sbjct: 153 SGRSLEIILSSGLDNQYLFSETISILQEEGVEVVNASFSVSGSSVFQTFHAQLEGSMIEF 212

Query: 197 GATKATERLKGLVYGSNSDIEEEKEKQWWDELATDNGDF 231
            A K TERLK LVYGSNSD+E +KEKQWWDE  +D+ D+
Sbjct: 213 EAAKVTERLKRLVYGSNSDMELQKEKQWWDEFPSDDLDY 251

[Close]

BLAST of ClCG07G002820 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-19
Identity = 66/184 (35.87%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 34  ASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIKELE 93
           +++  +  ++R+ VEKNRR+QMK+L  +L SLLPHH S +  L LPDQ+DEA  YIK+L+
Sbjct: 6   SNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQ 65

Query: 94  KKVNSAKEKKNQL----QRKNKSSINIDSSSSSAS-------PQLKINQMGKSLEIVLSS 153
             V   +E+K  L      +  +S+   S SSS         P+++I + G    I L +
Sbjct: 66  VNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVT 125

Query: 154 GLDDQYLLSETLRILQEE-GIEVVSASFSLSRNSVFHTIHAQLGDSMVELGA-TKATERL 205
            L+ +++  E +R+L EE G E+  A +S+  ++VFHT+H ++ +   + GA ++  ERL
Sbjct: 126 SLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEH--DYGARSQIPERL 185

[Close]

BLAST of ClCG07G002820 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 53/177 (29.94%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 31  QFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIK 90
           +    +SS+ + +R + EK+RR++MK+L     S+L  H S    L +P  ID+A  Y+ 
Sbjct: 6   EIGEGNSSSLREQRNLREKDRRMRMKHLF----SILSSHVSPTRKLPVPHLIDQATSYMI 65

Query: 91  ELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLD-DQYL 150
           +L++ VN  KEKK  L +    ++      S   P+L I     ++E+ L   L+  + +
Sbjct: 66  QLKENVNYLKEKKRTLLQGELGNL---YEGSFLLPKLSIRSRDSTIEMNLIMDLNMKRVM 125

Query: 151 LSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVYG 207
           L E + I +EEG +V+SA+     +   +TI AQ   S + +  ++  ER++ ++YG
Sbjct: 126 LHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIYG 175

[Close]

BLAST of ClCG07G002820 vs. ExPASy Swiss-Prot
Match: Q9XIJ1 (Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.2e-10
Identity = 51/175 (29.14%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 31  QFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIK 90
           +    S+S+ + +R + EK RR++MK+L     S+L  H S    L +P  ID+A+ Y+ 
Sbjct: 6   EIGEGSASSLREQRNLREKERRMRMKHLF----SILSSHVSPTRRLPVPQLIDQAVSYMI 65

Query: 91  ELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLDDQ-YL 150
           +L++KVN   E K   +R     +   S  SS  P+L I  +   +E+ L   L+ +  +
Sbjct: 66  QLKEKVNYLNEMK---RRMLGGEVKNRSEGSSLLPKLSIRSLDSIIEMNLVMDLNMKGVM 125

Query: 151 LSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLV 205
           L + + + +EEG +V+SA+     +  F+TI AQ     + +  ++  ERL+ ++
Sbjct: 126 LHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPSRIEERLRDII 173

[Close]

BLAST of ClCG07G002820 vs. ExPASy Swiss-Prot
Match: Q0JFZ0 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO2 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 51/182 (28.02%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 33  SASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIKEL 92
           S  S S  K+     E++RR Q+  L   L +LLP  D+    L++P  +   +KYI EL
Sbjct: 62  SGGSGSHRKLSHNAYERDRRKQLNELYSSLRALLP--DADHTKLSIPTTVSRVLKYIPEL 121

Query: 93  EKKVNSAKEKKNQLQRKNKSS-----INIDSSSSSASPQLK---INQMGKSLEIVLSSGL 152
           +K+V + + KK +L   + ++     +     S   +P +    IN M   +++ L S +
Sbjct: 122 QKQVENLERKKKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNV 181

Query: 153 DDQYL-LSETLRILQEEGIEVVSASFSLS-RNSVFHTIHAQLGDSMVELGATKATERLKG 205
               L LS+ +++L+ EG+  +S+S S    N  F++IH Q  +  +        ERL+ 
Sbjct: 182 AGSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFCERLEK 241

[Close]

BLAST of ClCG07G002820 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 51/182 (28.02%), Postives = 89/182 (48.90%), Query Frame = 0


Query: 33  SASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIKEL 92
           S  S S  K+     E++RR Q+  L   L +LLP  D     L++P  +   +KYI EL
Sbjct: 62  SGGSGSHRKLSHNAYERDRRKQLNELYSSLRALLPDAD-HTKKLSIPTTVSRVLKYIPEL 121

Query: 93  EKKVNSAKEKKNQLQRKNKSS-----INIDSSSSSASPQLK---INQMGKSLEIVLSSGL 152
           +K+V + + KK +L   + ++     +     S   +P +    IN M   +++ L S +
Sbjct: 122 QKQVENLERKKKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNV 181

Query: 153 DDQYL-LSETLRILQEEGIEVVSASFSLS-RNSVFHTIHAQLGDSMVELGATKATERLKG 205
               L LS+ +++L+ EG+  +S+S S    N  F++IH Q  +  +        ERL+ 
Sbjct: 182 AGSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFCERLEK 241

[Close]

BLAST of ClCG07G002820 vs. ExPASy TrEMBL
Match: A0A5D3C788 (Transcription factor bHLH55-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003340 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.7e-80
Identity = 166/204 (81.37%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 26  MYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEA 85
           M PNFQFSASSS+AAKIERRI+EKNRR QMKNLC +L SL+P  DSK+ SLALPDQID A
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 86  IKYIKELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLD 145
           IKYIK+LEKKVNSAKEKKN+LQ KNKS+IN+DSSSSS SPQLKINQMGKSLEIVLSSG+D
Sbjct: 61  IKYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSS-SPQLKINQMGKSLEIVLSSGID 120

Query: 146 DQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVY 205
           +QYLL ETLRILQEEGIEVV+ASFS+S  SVFHTIHA+LGDSMVE G TKATERLK LVY
Sbjct: 121 NQYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVY 180

Query: 206 GSNSDIEEEKEKQWWDELATDNGD 230
           GSNSD+E +KEKQWWDE  ++N D
Sbjct: 181 GSNSDVELQKEKQWWDEFPSENWD 203

[Close]

BLAST of ClCG07G002820 vs. ExPASy TrEMBL
Match: A0A1S3C1C4 (transcription factor bHLH55-like OS=Cucumis melo OX=3656 GN=LOC103495505 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 7.4e-79
Identity = 164/203 (80.79%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 27  YPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAI 86
           YPNFQFSASSS+AAKIERRI+EKNRR QMKNLC +L SL+P   SK+ SLALPDQID AI
Sbjct: 3   YPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQYSKEVSLALPDQIDVAI 62

Query: 87  KYIKELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLDD 146
           KYIK+LEKKVNSAKEKKN+LQ KNKS+IN+DSSSSS SPQLKINQMGKSLEIVLSSG+D+
Sbjct: 63  KYIKDLEKKVNSAKEKKNRLQGKNKSAINMDSSSSS-SPQLKINQMGKSLEIVLSSGIDN 122

Query: 147 QYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVYG 206
           QYLL ETLRILQEEGIEVV+ASFS+S  SVFHTIHA+LGDSMVE G TKATERLK LVYG
Sbjct: 123 QYLLCETLRILQEEGIEVVNASFSVSGKSVFHTIHAELGDSMVEFGTTKATERLKRLVYG 182

Query: 207 SNSDIEEEKEKQWWDELATDNGD 230
           SNSD+E +KEKQWW+E  ++N D
Sbjct: 183 SNSDVELQKEKQWWEEFPSENWD 204

[Close]

BLAST of ClCG07G002820 vs. ExPASy TrEMBL
Match: A0A0A0K2C9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048070 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.2e-75
Identity = 161/210 (76.67%), Postives = 183/210 (87.14%), Query Frame = 0


Query: 26  MYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEA 85
           M PNFQFSASSS+AAKIERRI+EKNRR QMKNLC +L SL+P  DSK+ SLALPDQID A
Sbjct: 1   MDPNFQFSASSSTAAKIERRIIEKNRRNQMKNLCDQLKSLVPQQDSKEVSLALPDQIDVA 60

Query: 86  IKYIKELEKKVNSAKEKKNQLQRKNKSSINID----SSSSSASPQLKINQMGKSLEIVLS 145
           IKYIK+LEK+VNSAKEKKN+LQ KNKS+IN+D    SSSSS+SPQLKINQMGKSLEI+LS
Sbjct: 61  IKYIKDLEKRVNSAKEKKNRLQGKNKSAINMDSSSSSSSSSSSPQLKINQMGKSLEIILS 120

Query: 146 SGLDDQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLK 205
           SG D+QYLL ETLRIL+EEG EVVSASFS+S NSVFHTIHAQLGDSMVE G TKATERL 
Sbjct: 121 SGNDNQYLLCETLRILEEEGTEVVSASFSVSGNSVFHTIHAQLGDSMVEFGMTKATERLT 180

Query: 206 GLVYGSNSDIE-EEKEKQWWDELATDNGDF 231
            LVY SNSD+E +++EKQWW E  ++N +F
Sbjct: 181 RLVYRSNSDVELQKEEKQWWKEFPSENWEF 210

[Close]

BLAST of ClCG07G002820 vs. ExPASy TrEMBL
Match: A0A6J1EW58 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111437113 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 6.1e-73
Identity = 161/224 (71.88%), Postives = 185/224 (82.59%), Query Frame = 0


Query: 15  NPLHLLHLLH----QMYPNFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHD 74
           N LHL  LLH    QM  +FQFS SSSSAAKIERRIVEKNRR QMK LC +LNSLLP+ D
Sbjct: 35  NLLHLHLLLHRSLYQMDRHFQFSTSSSSAAKIERRIVEKNRRNQMKTLCSQLNSLLPNQD 94

Query: 75  SKDASLALPDQIDEAIKYIKELEKKVNSAKEKKNQLQRKNKSSINID----SSSSSASPQ 134
           SK+ SLALPDQIDEA+KYIKELEKKVN AKEKK +L+ KNKSS+NI+    SSSSSASPQ
Sbjct: 95  SKEISLALPDQIDEAVKYIKELEKKVNLAKEKKEKLEGKNKSSMNIESSSSSSSSSASPQ 154

Query: 135 LKINQMGKSLEIVLSSGLDDQYLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGD 194
           LKI+Q G+SLEI+LSSGLD+QYL SET+ ILQEEG+EVV+ASFS+S +SVF T HAQL  
Sbjct: 155 LKIHQSGRSLEIILSSGLDNQYLFSETISILQEEGVEVVNASFSVSGSSVFQTFHAQLEG 214

Query: 195 SMVELGATKATERLKGLVYGSNSDIEEEKEKQWWDELATDNGDF 231
           SM+E  A K TERLK LVYGSNSD+E +KEKQWWDE  +D+ D+
Sbjct: 215 SMIEFEAAKVTERLKRLVYGSNSDMELQKEKQWWDEFPSDDLDY 258

[Close]

BLAST of ClCG07G002820 vs. ExPASy TrEMBL
Match: A0A6J1JEF7 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111486157 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-69
Identity = 147/203 (72.41%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 29  NFQFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKY 88
           +FQFS SSSSAAKIERRI+EKNRR QMK LC +LNSLLP+ DSK+ SL+LPDQIDEA+KY
Sbjct: 4   HFQFSTSSSSAAKIERRIIEKNRRNQMKTLCSQLNSLLPNQDSKEISLSLPDQIDEAVKY 63

Query: 89  IKELEKKVNSAKEKKNQLQRKNKSSINIDSSSS-SASPQLKINQMGKSLEIVLSSGLDDQ 148
           IKELEKKVN AKEKK +L+ KNKS +NI+SSSS SASPQLKI+Q G+SLEI+LSSGLD+Q
Sbjct: 64  IKELEKKVNLAKEKKEKLEGKNKSPMNIESSSSCSASPQLKIHQSGRSLEIILSSGLDNQ 123

Query: 149 YLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVYGS 208
           YL SET+ ILQ+EG+EVV+ASFS+S +SVF T HAQL  S++E  A K TERLK LVYGS
Sbjct: 124 YLFSETISILQKEGVEVVNASFSVSGSSVFQTFHAQLEGSIIEFEAAKVTERLKRLVYGS 183

Query: 209 NSDIEEEKEKQWWDELATDNGDF 231
           NSD+E +KEKQWWDE  +D+ D+
Sbjct: 184 NSDMELQKEKQWWDEFPSDDLDY 206

[Close]

BLAST of ClCG07G002820 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20
Identity = 66/184 (35.87%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 34  ASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIKELE 93
           +++  +  ++R+ VEKNRR+QMK+L  +L SLLPHH S +  L LPDQ+DEA  YIK+L+
Sbjct: 6   SNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQ 65

Query: 94  KKVNSAKEKKNQL----QRKNKSSINIDSSSSSAS-------PQLKINQMGKSLEIVLSS 153
             V   +E+K  L      +  +S+   S SSS         P+++I + G    I L +
Sbjct: 66  VNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVT 125

Query: 154 GLDDQYLLSETLRILQEE-GIEVVSASFSLSRNSVFHTIHAQLGDSMVELGA-TKATERL 205
            L+ +++  E +R+L EE G E+  A +S+  ++VFHT+H ++ +   + GA ++  ERL
Sbjct: 126 SLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEH--DYGARSQIPERL 185

[Close]

BLAST of ClCG07G002820 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11
Identity = 53/177 (29.94%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 31  QFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIK 90
           +    +SS+ + +R + EK+RR++MK+L     S+L  H S    L +P  ID+A  Y+ 
Sbjct: 6   EIGEGNSSSLREQRNLREKDRRMRMKHLF----SILSSHVSPTRKLPVPHLIDQATSYMI 65

Query: 91  ELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLD-DQYL 150
           +L++ VN  KEKK  L +    ++      S   P+L I     ++E+ L   L+  + +
Sbjct: 66  QLKENVNYLKEKKRTLLQGELGNL---YEGSFLLPKLSIRSRDSTIEMNLIMDLNMKRVM 125

Query: 151 LSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLVYG 207
           L E + I +EEG +V+SA+     +   +TI AQ   S + +  ++  ER++ ++YG
Sbjct: 126 LHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSRIEERVRKIIYG 175

[Close]

BLAST of ClCG07G002820 vs. TAIR 10
Match: AT1G10586.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-11
Identity = 51/175 (29.14%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 31  QFSASSSSAAKIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIK 90
           +    S+S+ + +R + EK RR++MK+L     S+L  H S    L +P  ID+A+ Y+ 
Sbjct: 6   EIGEGSASSLREQRNLREKERRMRMKHLF----SILSSHVSPTRRLPVPQLIDQAVSYMI 65

Query: 91  ELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKSLEIVLSSGLDDQ-YL 150
           +L++KVN   E K   +R     +   S  SS  P+L I  +   +E+ L   L+ +  +
Sbjct: 66  QLKEKVNYLNEMK---RRMLGGEVKNRSEGSSLLPKLSIRSLDSIIEMNLVMDLNMKGVM 125

Query: 151 LSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERLKGLV 205
           L + + + +EEG +V+SA+     +  F+TI AQ     + +  ++  ERL+ ++
Sbjct: 126 LHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPSRIEERLRDII 173

[Close]

BLAST of ClCG07G002820 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 46/169 (27.22%), Postives = 84/169 (49.70%), Query Frame = 0


Query: 41  KIERRIVEKNRRIQMKNLCFKLNSLLPHHDSKDASLALPDQIDEAIKYIKELEKKVNSAK 100
           K+  R  E+ RR +M +L   L SLLP H  K    +  DQ++EA+ YIK L++K+    
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIK-GKRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 101 EKKNQLQRKNKSSI--------NIDSSSSSASPQLKINQMGKSLEIVLSSG-LDDQYLLS 160
            +++ L   ++ S+          D    S    + + Q    +EI+LSS     Q   S
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 122

Query: 161 ETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGATKATERL 201
             L++L E G+ ++++  S+  + + +TI A++ D  + +   +  +RL
Sbjct: 123 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRL 170

[Close]

BLAST of ClCG07G002820 vs. TAIR 10
Match: AT1G10586.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05
Identity = 37/130 (28.46%), Postives = 69/130 (53.08%), Query Frame = 0


Query: 76  LALPDQIDEAIKYIKELEKKVNSAKEKKNQLQRKNKSSINIDSSSSSASPQLKINQMGKS 135
           L +P  ID+A+ Y+ +L++KVN   E K   +R     +   S  SS  P+L I  +   
Sbjct: 6   LPVPQLIDQAVSYMIQLKEKVNYLNEMK---RRMLGGEVKNRSEGSSLLPKLSIRSLDSI 65

Query: 136 LEIVLSSGLDDQ-YLLSETLRILQEEGIEVVSASFSLSRNSVFHTIHAQLGDSMVELGAT 195
           +E+ L   L+ +  +L + + + +EEG +V+SA+     +  F+TI AQ     + +  +
Sbjct: 66  IEMNLVMDLNMKGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPS 125

Query: 196 KATERLKGLV 205
           +  ERL+ ++
Sbjct: 126 RIEERLRDII 132

The following BLAST results are available for this feature:

BLAST of ClCG07G002820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888628.1	5.1e-82	83.01	transcription factor bHLH162-like [Benincasa hispida]	[more]
KAA0031567.1	1.8e-79	81.37	transcription factor bHLH55-like [Cucumis melo var. makuwa] >TYK07018.1 transcri...	[more]
XP_008455310.1	1.5e-78	80.79	PREDICTED: transcription factor bHLH55-like [Cucumis melo]	[more]
XP_011659708.1	4.6e-75	76.67	transcription factor bHLH162 [Cucumis sativus] >KGN43623.1 hypothetical protein ...	[more]
XP_023531689.1	2.5e-73	73.52	transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG07G002820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	1.7e-19	35.87	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]
F4I4E1	1.4e-10	29.94	Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=...	[more]
Q9XIJ1	9.2e-10	29.14	Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=...	[more]
Q0JFZ0	3.0e-08	28.02	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=3...	[more]
A2WZ60	1.1e-07	28.02	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399...	[more]

BLAST of ClCG07G002820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C788	8.7e-80	81.37	Transcription factor bHLH55-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C1C4	7.4e-79	80.79	transcription factor bHLH55-like OS=Cucumis melo OX=3656 GN=LOC103495505 PE=4 SV...	[more]
A0A0A0K2C9	2.2e-75	76.67	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048070 PE=4 S...	[more]
A0A6J1EW58	6.1e-73	71.88	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111437113 ...	[more]
A0A6J1JEF7	1.8e-69	72.41	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111486157 PE...	[more]

BLAST of ClCG07G002820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	1.2e-20	35.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10585.1	1.0e-11	29.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10586.1	6.5e-11	29.14	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	1.7e-06	27.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10586.2	1.4e-05	28.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..126
None	No IPR available	PANTHER	PTHR13935:SF63	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 35..211
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 45..98 e-value: 0.0011 score: 28.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 43..93 e-value: 4.5E-6 score: 26.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 39..92 score: 11.000954
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 31..117 e-value: 1.0E-8 score: 37.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 41..111
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 35..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G002820.2	ClCG07G002820.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity