ClCG07G002180 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAATCACCTTGAAGCCAAAGACAACCATTATGTTCATTATTCCTCTGCTTCCACATCTCCAAACGGGAAATGTTTGCTTTCTTCTGTTTTGCACTTAAGTTGTTCGTAAACATTCCTCTGTGGATGCTGATACTCTTTTTTTGCATATGTCCAACAGATAAGATGTGGGAAGTGTTGGATCGGTGTGGGAAGAGGTTTGAAGATTGTTCTAAGATGATAGACGCTGCAGCAGATGGCGTCTGGAATCACTGTTAGTTCTTTCCTCTATTCAAGTTTCTTTTTTGAATGTGTTTCTTTCACCAACAATTCTAATAAGAAACTTATTGCTTCTTCATTTTGATACTGTTAAAGTTTAGTTCCCTTCATCTCTCTAATATGTTTGGTCAAGTTTTCAACGAGTTGGTTTCAGGTTTGTCATGAGTTATCATTGATTCCAAATAATCAATGATTGGTTTCAAAGATTAAAATTTTGTAGAGAAATAGTTTCAGGTTTCCCTTTAAGTTGTCATTGATCCAAACAATCAATGATTAACTTCCAATCACAAATGGCATGTTAAAAGTTACAAACTGAACCAACTTTTCTTGGCAAGGATTTGCTTTGTTCCTTTGGTCATTTCTAGATGAAATTTGAAGCCTGGATTTATATACCTGTTTGATGTCCTCTCGGTCTTATTAGTGTTTAACCTGCATTGCAATATACGTTTTTGCCAACAGTGAAACTTAGTTCTTGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACGAAGTTACTTACTGAAGGTGGCTATAAAAAAGTATTCCAACAGACGTTTGGTTTGGTTGATGGAGACAAATACTTGGATTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGGCCTGTGAATGGGACTCTGTACATATCCACAAAAAGAATGGCATTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCCAGCCACAGTGGATCCTTTACAAGGTTTGTCTGGCCTGCCTATTGTTCTTGAAGATATTTTGATCTGATGGATCTGAAGTAGGATTTTAGGACACAAAACTTAGCTGTTTACTGATAAGTAGTTAACTGAGGTTATTTAAGGCCGGTTTAATAACAATTTGGTTTTGGGTTCTTAGTTTTTAAAAATTAAGCTTGTAAACACTACTTTGATTTATGGAGTTTATTTTTTTTATCTACTTCTTAACAATGTTTTCAAAATTCATGCCAAGTTTTGAAGTCTAGGAAAGTAGGTCATGTTTGATAACTATTTTGTTTTAGAAATATATGCTTGTTTTCTCCAAATTTATTGGTAAGCTTTTCACCTACTAAAAAACACATGTGAACTCTAGGCCAAATTTAAAAAATAAAATCGTGTTTTCAAAAACTAGGGTTTTGGTTTTCAAAATTTGACTCTTAACTTTTGAGAACATGTTTAAAAAGTGGGTAATATAGCAAAAAAAGCCTATATGTAAAAGTAGTTTTTAGAAAAACAAAAACAAAATGGTTGTCAAACAAGTCGTACTTTTAAAATCTCGTTTTTAGAAATTCAAGTATTTATGAAGAAATTGGGATAAAACAAGCACAATTTTAAAAAATTAAAACTCAATTGAACAGGGTCTTAGATATATAGAAGGAAAGACAAAACAGAATGGGTAAGATAAGACCTCTCATATGTTTGATGAGAGGTCTGAGACACTTCACAGAAGATTCTACTGGCTTAACTCTCTGCTAATGTCCCCACTCACATATACTTCTCTTATCTAACACGTGGTGAGGGCCCTGCTACCTTCACTCTCAAAGATATTCCTATTACAGTTACAGATGGAGCCCGTAATAAAATTTGTTTTTGACCAATTTCTCTCTTCCTCTAACTTCCATTTGTATTTCCCGCCCTTTCTTCTTTGAACACATCATATGCATAGGTGGCTTCTTGAGTACAAGGAAAATTTCTAGTGTTACAGTAACTCAGTTCAATGTTTTTCATAAAAGAAGCATAAAGAATGGTGTGGGATTCCGTGAAATCAAATTATATATCATTTAGTGATGTCTTAAAAGTTAAATGGAAGGAGTATGTACTACTATACTACTATAAAATTTTCCCTCAAACGCAGACCCTGCTTTTTTCTCTTAGTTTATGATGAAGAGATAAGAACAAGAAGAAGAGATAGTTGTTAATTGGTTGGTAGTCAAGTTTTCTATAAAATTATTCTCTAAACTTGCTTAGTATGATTATGTTTATTGTTTTGACCCCAGTGAATCACAATTTCACTTGGTTTCTCCAGTGAAATTCAATATGAAAATTTTCCCAATTGTTTATTTTTCTTATTGTGAAAATAATTGAAGTTCAAATCCACTAGAATAAAAGTTATGACATAAGATAATAGAAGTATCTAGTCTTATAGTATAGTTCATAATCTCAATGGAGTAAAATAGTCGACACTCATTCACTGTTTGATGAATGAGAGATAGTGTATTAGGGACTATACTCTTCACTAGGAAAGTATATCAGCCCATAATTAATACCATTTAACATACTCATTAAATAGCCTAACATAATTGTCCTTTCTTTGTTACCCACTATGAATTAATTAATAAACCGGGGTACCTTGGGATCATTAACAATGGGTGGAGGAACTGGAAATGAAAGAATGCAGGGTCTGATCTTCCTGTGGGATACCATTGATGGATTGTCAGTCGACAGAGACTATAAGCTGTTGTGCAAGAACCTGTTTCTGGTTTGAAGAATAATAAATGAAACCACTTAAAGAGTGAAAGAAGAGTCTGCAGCTTTAGAAAGCTCTTTTTCTTGGACATCCATCAAACCGCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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ATGAGCAATCACCTTGAAGCCAAAGACAACCATTATGTTCATTATTCCTCTGCTTCCACATCTCCAAACGGGAAATGTTTGCTTTCTTCTGTTTTGCACTTAAATAAGATGTGGGAAGTGTTGGATCGGTGTGGGAAGAGGTTTGAAGATTGTTCTAAGATGATAGACGCTGCAGCAGATGGCGTCTGGAATCACTTGAAACTTAGTTCTTGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACGAAGTTACTTACTGAAGGTGGCTATAAAAAAGTATTCCAACAGACGTTTGGTTTGGTTGATGGAGACAAATACTTGGATTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGGCCTGTGAATGGGACTCTGTACATATCCACAAAAAGAATGGCATTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCCAGCCACAGTGGATCCTTTACAAGGTGGTGATAGCGGTTGATCAGTTGGGGAAAATCAATGCTTCTTCAAATCTCATGGACTCCTCACAAAAATACATCCAAGTAATCACGAGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATTACAAGGCTGTCAAGACTTTAACTGATGCATTGCAGCAATCCCGTGCCTAGGTCGGACTCGGAGGATACCAAAATGCAACTGTTCCCTCTCGCAATCTTGTGCCTACCTAAACCAACACTTCCTCCTGTACTCTTTACATATATTTTTCTGTTTCGGTCTAATAGGAGATACAAAATGAACATTGAATAGAAACTAATAATAATCCTTGGATGTGG ATGAGCAATCACCTTGAAGCCAAAGACAACCATTATGTTCATTATTCCTCTGCTTCCACATCTCCAAACGGGAAATGTTTGCTTTCTTCTGTTTTGCACTTAAATAAGATGTGGGAAGTGTTGGATCGGTGTGGGAAGAGGTTTGAAGATTGTTCTAAGATGATAGACGCTGCAGCAGATGGCGTCTGGAATCACTTGAAACTTAGTTCTTGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACGAAGTTACTTACTGAAGGTGGCTATAAAAAAGTATTCCAACAGACGTTTGGTTTGGTTGATGGAGACAAATACTTGGATTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGGCCTGTGAATGGGACTCTGTACATATCCACAAAAAGAATGGCATTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCCAGCCACAGTGGATCCTTTACAAGGTGGTGATAGCGGTTGATCAGTTGGGGAAAATCAATGCTTCTTCAAATCTCATGGACTCCTCACAAAAATACATCCAAGTAATCACGAGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATTACAAGGCTGTCAAGACTTTAACTGATGCATTGCAGCAATCCCGTGCCTAG MSNHLEAKDNHYVHYSSASTSPNGKCLLSSVLHLNKMWEVLDRCGKRFEDCSKMIDAAADGVWNHLKLSSCVTDAAMARLHQGTKLLTEGGYKKVFQQTFGLVDGDKYLDSFACYLSTSSGPVNGTLYISTKRMAFCSEFPLCYYPSPGQPQWILYKVVIAVDQLGKINASSNLMDSSQKYIQVITRDSHEFWFMGFISYYKAVKTLTDALQQSRA Homology
BLAST of ClCG07G002180 vs. NCBI nr
Match: XP_038887653.1 (GEM-like protein 2 isoform X1 [Benincasa hispida] >XP_038887654.1 GEM-like protein 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 384.0 bits (985), Expect = 8.3e-103 Identity = 187/216 (86.57%), Postives = 197/216 (91.20%), Query Frame = 0
BLAST of ClCG07G002180 vs. NCBI nr
Match: XP_038887655.1 (GEM-like protein 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102 Identity = 187/216 (86.57%), Postives = 196/216 (90.74%), Query Frame = 0
BLAST of ClCG07G002180 vs. NCBI nr
Match: XP_008460396.1 (PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 370.9 bits (951), Expect = 7.3e-99 Identity = 182/237 (76.79%), Postives = 200/237 (84.39%), Query Frame = 0
BLAST of ClCG07G002180 vs. NCBI nr
Match: XP_008460398.1 (PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 364.0 bits (933), Expect = 8.9e-97 Identity = 177/216 (81.94%), Postives = 192/216 (88.89%), Query Frame = 0
BLAST of ClCG07G002180 vs. NCBI nr
Match: XP_022159858.1 (GEM-like protein 2 [Momordica charantia]) HSP 1 Score: 344.7 bits (883), Expect = 5.6e-91 Identity = 168/216 (77.78%), Postives = 183/216 (84.72%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.0e-46 Identity = 94/215 (43.72%), Postives = 142/215 (66.05%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.1e-44 Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.1e-44 Identity = 94/206 (45.63%), Postives = 133/206 (64.56%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 145.6 bits (366), Expect = 6.6e-34 Identity = 84/212 (39.62%), Postives = 120/212 (56.60%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.4e-30 Identity = 60/160 (37.50%), Postives = 96/160 (60.00%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy TrEMBL
Match: A0A1S3CCH4 (GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.5e-99 Identity = 182/237 (76.79%), Postives = 200/237 (84.39%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy TrEMBL
Match: A0A1S3CCD7 (GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.3e-97 Identity = 177/216 (81.94%), Postives = 192/216 (88.89%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy TrEMBL
Match: A0A6J1E018 (GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.7e-91 Identity = 168/216 (77.78%), Postives = 183/216 (84.72%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy TrEMBL
Match: A0A1S3CCV4 (GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.5e-89 Identity = 159/185 (85.95%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of ClCG07G002180 vs. ExPASy TrEMBL
Match: A0A067K7X8 (GRAM domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_14146 PE=3 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 3.5e-62 Identity = 109/182 (59.89%), Postives = 150/182 (82.42%), Query Frame = 0
BLAST of ClCG07G002180 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47 Identity = 94/215 (43.72%), Postives = 142/215 (66.05%), Query Frame = 0
BLAST of ClCG07G002180 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 179.9 bits (455), Expect = 2.2e-45 Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 0
BLAST of ClCG07G002180 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 179.9 bits (455), Expect = 2.2e-45 Identity = 94/206 (45.63%), Postives = 133/206 (64.56%), Query Frame = 0
BLAST of ClCG07G002180 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 174.5 bits (441), Expect = 9.4e-44 Identity = 91/215 (42.33%), Postives = 138/215 (64.19%), Query Frame = 0
BLAST of ClCG07G002180 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31 Identity = 60/160 (37.50%), Postives = 96/160 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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