ClCG07G001710 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G001710
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Rho GTPase-activating protein like
Location	CG_Chr07: 1852884 .. 1855609 (+)
RNA-Seq Expression	ClCG07G001710
Synteny	ClCG07G001710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCATGTCTATTTCAAAATTTTCCTTCGATTTCTGCACACCCTCTAAAACGCCATAGAAATCCAGCCATTTCCCCCCATTCCCAGTTCCTCCCTACGAAGTCCTTAAAACTCAAAAAACAATCTTTCCTCTTAAATCCACAAATTGTGAAGCTAAGAACTCGAGGGTCTCCTTCTTTCCCGCTTGTATGTGCTGCTCAGAACAATTTCTTGAGAGGTTGGCTTCCTTTCTTTTCTGGTTTCTAATGGGTTGTTAGAATTTCAATTCGTTTTGGGGGAAATGGTTAAGTGAGTTGGAATTGAAGTGGTTGAGTTGCTTTAACTAAAGGGTTTCCATTAAAACTTGTTAAAGTTTTCATGATGTTATACATATGTTATTTTTGTACCCCATTATTATGCTTTACAATGACATTGTGAAGTTCTATTTCTGTTGGAAAAATGCTGTGAAGTCTTTCAGACAGTTTTGAAGGTTGGGAAGGATGGAATTGAGGCAGGAACAGACCTAGTACCCGTAAGTTCTCCTTTCTGTATCCATATATCCATACCTTTCTATTTTGATGCATGTTTGGGAGCGATTTTGAAAGGTTAAAATTATTTTTGTCATTAAAAGCTACTTGATTTTACATTTAAATAAATGTGATTTGCACCTTGATTTGGAATGGTTATAAGATATTTTAGTGATCTTGAACTTGACGTAAGCGATTTGAATCAATCCCGAATATGCTTTCAATTCATTTCAACATCAAATGCGGATGGTTTTTCTGGAGGAAGAAAGAGGTATTGGAGAACAAAGCATAGAAGAACTAATTGTCTATTTTGTGGCCTTGTTTTTAGGACTCTGTACCAAGACCAATTGCAAGGATATCTGTTGCAATAGTTGCATTAACTATTGGACTCTTTTTGTTCAAGTCAATTTTGTCTACAGCCTTATTTGTGCTGGTATTACATACTCTTACTATCACTTACTTATGGACTACAGTTGTTCGTTTTTTTTTTTTCCCTTTTTGGCCACTGTATATATCTTTTTTCTAAATTTAAAGTATCTCGGTCTTTTTGGAAGTTTCTACTAATTTCTCTTCAGGCACCTTCAGTTATAAAAAAATAAAAAAGGAAAAAAAAGAAAAAGAAATTTAAGAAGTATTTGGGGCGCTGAGTTAGTTATTATAGTTTGTGGGATATAATAAAAGGTAGGGTAATAGTCTGTGTTTGGGATACGTACTATTTTAGTCTGGGTAGGAAATAGTAAACATTGTAACAAAGAGAGAAAGTGAGAATGAATAGGAAATAATAAACATTGTAACAAAGAAAGAGGGAGAATGAGTAGGAAATAGTAAACACTATAACAAAGAGGGATTTGAAATAACGACCTTACTTGAATAGGATCTCTTCTATAGGTTGTATAACTATGTCCTTGAGTTCTAAAGAGGGCTTTAAAATAGTAATATTGTAGTTAATTATAGGTTATAATAGTTGAAAACACCAACTATTATAATTTGAGCCCCAAACCTGGGGTGGGCTATAGTTGTAATCTAATTTTTCCCTGCTTCATCAATTGACATAACTGGAATAGTGGTGAAAAACTAATTCTTTTAGGTCAACACTACTAGGAAAAGTACATTTGACATTTCCCTAGTGTCGCTTTGAAACCACCTGTATCTTTACTTCCAAATCACCACAGATGCATAATTAATTAATTATTATCATTTATGTGAATATCTATGTGTTGACTTGCACAAATTGAACAAAATCTCAATAAAATTTAGATGAACATGCAAAAAGACATGACAATGTAACTAAGTGAAAGTTTTCTTTTAGTATACAGATGAATCACAAACACGGAAACATGATATGGGCACAGCGACACATCAATTTCTAAAAAACATAGGACATGGATTCGTCAAAAATACAGTTTCTATATATATATATATTAATACTTCCTCCTACAGATTTTGAAAACACCTCTAAAAAGTAGATACAAGACAATACCAAAAAAAAGGGTGGGAGAAGTGTTGATAAACTTCATTTCTAAACAAACAAAAACAAACAATCAAATGGTTATAAAGGGGGCCTTAGTTTCTTCACAAATGAAATTGGGGTGGTTTGGTGCTGTCCTTCAGCATAATGCTGATAATTCTTACATCCTGATAGCACATTGCTTCACCACCCAACTGGAACTTTCGGTTTCACCTATGAATTTGACAATCAGCATGTTCTTGATTAAGCCAGTATCTTGGGTCTTATCAAGTGATGGAAGGAACAAAGAAAAATGGTATATTGCATGTATTGTAACATTCATCTGTAGAAGTCTTCTGCACTTAATTTTTGGTTTCATATTAAGTATAGGATGATCAATCATTTGCCACTCGTGGTTGTTAGTGAGCATCTTAGCCATTGATTCATTTTATTTTCTGCCTGGTAGTGTTTAAATCCGGTTGCAAAAGGAATATCTTTAATTGTTTTCCAATTGACTGATCATGGAGCTGTTTCTCATTGAAGTTTTCACTCTTGAAATCAATTAAATTGTGCAACTTACTGAAAAAATGATCGTATGGATGCAGGCTATGATGGGAGCAATTTATTTCATATTTATAGCGTTGAATAAAGATGAAGGACCAAGGGGAGATGGAGGCTCCTCCTCCTCCTCCTCCTCCTCTACCTCCCCAACCTCTACAGAAGAGACTCTTGAAGAAGCTAGAAGAATAATGGAGAAGTACAAGTAG

mRNA sequence

ATGGCTTCTTCATGTCTATTTCAAAATTTTCCTTCGATTTCTGCACACCCTCTAAAACGCCATAGAAATCCAGCCATTTCCCCCCATTCCCAGTTCCTCCCTACGAAGTCCTTAAAACTCAAAAAACAATCTTTCCTCTTAAATCCACAAATTGTGAAGCTAAGAACTCGAGGGTCTCCTTCTTTCCCGCTTGTATGTGCTGCTCAGAACAATTTCTTGAGAGTTCTATTTCTGTTGGAAAAATGCTGTGAAGTCTTTCAGACAGTTTTGAAGGTTGGGAAGGATGGAATTGAGGCAGGAACAGACCTAGTACCCGACTCTGTACCAAGACCAATTGCAAGGATATCTGTTGCAATAGTTGCATTAACTATTGGACTCTTTTTGTTCAAGTCAATTTTGTCTACAGCCTTATTTGTGCTGGCTATGATGGGAGCAATTTATTTCATATTTATAGCGTTGAATAAAGATGAAGGACCAAGGGGAGATGGAGGCTCCTCCTCCTCCTCCTCCTCCTCTACCTCCCCAACCTCTACAGAAGAGACTCTTGAAGAAGCTAGAAGAATAATGGAGAAGTACAAGTAG

Coding sequence (CDS)

ATGGCTTCTTCATGTCTATTTCAAAATTTTCCTTCGATTTCTGCACACCCTCTAAAACGCCATAGAAATCCAGCCATTTCCCCCCATTCCCAGTTCCTCCCTACGAAGTCCTTAAAACTCAAAAAACAATCTTTCCTCTTAAATCCACAAATTGTGAAGCTAAGAACTCGAGGGTCTCCTTCTTTCCCGCTTGTATGTGCTGCTCAGAACAATTTCTTGAGAGTTCTATTTCTGTTGGAAAAATGCTGTGAAGTCTTTCAGACAGTTTTGAAGGTTGGGAAGGATGGAATTGAGGCAGGAACAGACCTAGTACCCGACTCTGTACCAAGACCAATTGCAAGGATATCTGTTGCAATAGTTGCATTAACTATTGGACTCTTTTTGTTCAAGTCAATTTTGTCTACAGCCTTATTTGTGCTGGCTATGATGGGAGCAATTTATTTCATATTTATAGCGTTGAATAAAGATGAAGGACCAAGGGGAGATGGAGGCTCCTCCTCCTCCTCCTCCTCCTCTACCTCCCCAACCTCTACAGAAGAGACTCTTGAAGAAGCTAGAAGAATAATGGAGAAGTACAAGTAG

Protein sequence

MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSPSFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEETLEEARRIMEKYK

Homology

[Close]

BLAST of ClCG07G001710 vs. NCBI nr
Match: XP_038887965.1 (uncharacterized protein LOC120077928 [Benincasa hispida] >XP_038887966.1 uncharacterized protein LOC120077928 [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 164/193 (84.97%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF NFPSISAHPL RHRN  IS HSQFLP+ SLKLKKQSFLLNP+I KLRTRGSP
Sbjct: 1   MASSCLFHNFPSISAHPLTRHRNTPISLHSQFLPSNSLKLKKQSFLLNPKIGKLRTRGSP 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SF LV AAQNNFLR          VFQTV KVGKDGIEAGTDL+PDSVPRPIARISV +V
Sbjct: 61  SFTLVYAAQNNFLR----------VFQTVWKVGKDGIEAGTDLLPDSVPRPIARISVGMV 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSS    SPTSTEE
Sbjct: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSS----SPTSTEE 179

Query: 181 TLEEARRIMEKYK 194
           TLEEARRIMEKYK
Sbjct: 181 TLEEARRIMEKYK 179

[Close]

BLAST of ClCG07G001710 vs. NCBI nr
Match: XP_004152015.1 (uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus] >KAE8650842.1 hypothetical protein Csa_017556 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 1.2e-73
Identity = 160/193 (82.90%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF NFPSIS HPL RHRNP IS HSQ LP  SLKLK+QSFL NPQI KLRTRGSP
Sbjct: 1   MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSP 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFPLV AAQNNFLR          VFQTV K+GKDGIEAGTDLVPDSVPRPIARISV IV
Sbjct: 61  SFPLVYAAQNNFLR----------VFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIV 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           ALTIGLFLFKS+LSTALFVLAMMGAIYFIFIALNKDEGPRG GGSSS      SPTSTEE
Sbjct: 121 ALTIGLFLFKSVLSTALFVLAMMGAIYFIFIALNKDEGPRGGGGSSS------SPTSTEE 177

Query: 181 TLEEARRIMEKYK 194
           TLEEARRIMEKYK
Sbjct: 181 TLEEARRIMEKYK 177

[Close]

BLAST of ClCG07G001710 vs. NCBI nr
Match: XP_008447333.1 (PREDICTED: uncharacterized protein LOC103489804 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 2.4e-69
Identity = 159/193 (82.38%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF NFPSISAHPL RHRNP IS HSQFLP  SLKLKKQS     QI KLR RGSP
Sbjct: 1   MASSCLFHNFPSISAHPLTRHRNPTISLHSQFLPLNSLKLKKQS-----QIEKLRARGSP 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFPLV AAQNNFLR          VFQTV K+GKDGIEAGTDLVP SVPRPIARISV IV
Sbjct: 61  SFPLVYAAQNNFLR----------VFQTVWKIGKDGIEAGTDLVPGSVPRPIARISVGIV 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           AL IGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRG GGSSSSSSS    TSTEE
Sbjct: 121 ALAIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGGGGSSSSSSS----TSTEE 174

Query: 181 TLEEARRIMEKYK 194
           TLEEARRIMEKYK
Sbjct: 181 TLEEARRIMEKYK 174

[Close]

BLAST of ClCG07G001710 vs. NCBI nr
Match: XP_022159605.1 (uncharacterized protein LOC111025970 [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 8.1e-65
Identity = 149/193 (77.20%), Postives = 153/193 (79.27%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASS LF NF SIS HP  RHRNP I PHSQFLP  SLKLKKQS   N QI KL  RGSP
Sbjct: 1   MASSSLFHNFSSISPHPSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSP 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFPLV AAQNNFLR          VFQTV K+GKDGIEAGT LVPDSVPRPIARISVAIV
Sbjct: 61  SFPLVYAAQNNFLR----------VFQTVWKIGKDGIEAGTGLVPDSVPRPIARISVAIV 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           A TI LFL KS+LSTALFVLAMMGAIYF+FIALNKDEGPRG GGS SSS+     TSTEE
Sbjct: 121 ASTIALFLLKSVLSTALFVLAMMGAIYFVFIALNKDEGPRGGGGSPSSST-----TSTEE 178

Query: 181 TLEEARRIMEKYK 194
           TLEEARRIMEKYK
Sbjct: 181 TLEEARRIMEKYK 178

[Close]

BLAST of ClCG07G001710 vs. NCBI nr
Match: KAG6606331.1 (hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036271.1 hypothetical protein SDJN02_03074 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-64
Identity = 145/193 (75.13%), Postives = 158/193 (81.87%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF N PSIS+HPL+RHRN  I  HSQFLP  SLKL+KQSFL N +I KLRTRGS 
Sbjct: 1   MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSD 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFP+V AAQNNFLR          VFQTV KVGKDGIEAGTDLVP SVPRP+ARISVAI 
Sbjct: 61  SFPVVYAAQNNFLR----------VFQTVWKVGKDGIEAGTDLVPGSVPRPVARISVAIA 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRG GGS+SS++      STEE
Sbjct: 121 ALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTA------STEE 177

Query: 181 TLEEARRIMEKYK 194
           TLEEAR+IMEKYK
Sbjct: 181 TLEEARKIMEKYK 177

[Close]

BLAST of ClCG07G001710 vs. ExPASy TrEMBL
Match: A0A1S3BHT2 (uncharacterized protein LOC103489804 OS=Cucumis melo OX=3656 GN=LOC103489804 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.2e-69
Identity = 159/193 (82.38%), Postives = 160/193 (82.90%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF NFPSISAHPL RHRNP IS HSQFLP  SLKLKKQS     QI KLR RGSP
Sbjct: 1   MASSCLFHNFPSISAHPLTRHRNPTISLHSQFLPLNSLKLKKQS-----QIEKLRARGSP 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFPLV AAQNNFLR          VFQTV K+GKDGIEAGTDLVP SVPRPIARISV IV
Sbjct: 61  SFPLVYAAQNNFLR----------VFQTVWKIGKDGIEAGTDLVPGSVPRPIARISVGIV 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           AL IGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRG GGSSSSSSS    TSTEE
Sbjct: 121 ALAIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGGGGSSSSSSS----TSTEE 174

Query: 181 TLEEARRIMEKYK 194
           TLEEARRIMEKYK
Sbjct: 181 TLEEARRIMEKYK 174

[Close]

BLAST of ClCG07G001710 vs. ExPASy TrEMBL
Match: A0A6J1DZ75 (uncharacterized protein LOC111025970 OS=Momordica charantia OX=3673 GN=LOC111025970 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.9e-65
Identity = 149/193 (77.20%), Postives = 153/193 (79.27%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASS LF NF SIS HP  RHRNP I PHSQFLP  SLKLKKQS   N QI KL  RGSP
Sbjct: 1   MASSSLFHNFSSISPHPSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSP 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFPLV AAQNNFLR          VFQTV K+GKDGIEAGT LVPDSVPRPIARISVAIV
Sbjct: 61  SFPLVYAAQNNFLR----------VFQTVWKIGKDGIEAGTGLVPDSVPRPIARISVAIV 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           A TI LFL KS+LSTALFVLAMMGAIYF+FIALNKDEGPRG GGS SSS+     TSTEE
Sbjct: 121 ASTIALFLLKSVLSTALFVLAMMGAIYFVFIALNKDEGPRGGGGSPSSST-----TSTEE 178

Query: 181 TLEEARRIMEKYK 194
           TLEEARRIMEKYK
Sbjct: 181 TLEEARRIMEKYK 178

[Close]

BLAST of ClCG07G001710 vs. ExPASy TrEMBL
Match: A0A6J1ESP6 (uncharacterized protein LOC111437405 OS=Cucurbita moschata OX=3662 GN=LOC111437405 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.7e-65
Identity = 144/193 (74.61%), Postives = 158/193 (81.87%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF N PSIS+HPL+RHRNP I  HSQFLP  SLKL+KQ FL N +I KLRTRGS 
Sbjct: 1   MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSD 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFP+V AAQNNFLR          VFQTV KVGKDGIEAGT+LVP SVPRP+ARISVAI 
Sbjct: 61  SFPVVYAAQNNFLR----------VFQTVWKVGKDGIEAGTELVPGSVPRPVARISVAIA 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRG GGS+SS++      STEE
Sbjct: 121 ALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTA------STEE 177

Query: 181 TLEEARRIMEKYK 194
           TLEEAR+IMEKYK
Sbjct: 181 TLEEARKIMEKYK 177

[Close]

BLAST of ClCG07G001710 vs. ExPASy TrEMBL
Match: A0A6J1K1P0 (uncharacterized protein LOC111491610 OS=Cucurbita maxima OX=3661 GN=LOC111491610 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 143/193 (74.09%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF N PSIS+HPL+RHRN  I  HSQFLP  SLKL+KQSFL   +I KLR R S 
Sbjct: 1   MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWYSRIGKLRNRSSA 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFP+V AAQNNFLR          VFQTV KVGKDGIEAGTDLVPDSVPRP+ARISVAI 
Sbjct: 61  SFPVVYAAQNNFLR----------VFQTVWKVGKDGIEAGTDLVPDSVPRPVARISVAIA 120

Query: 121 ALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEE 180
           AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRG GGS+SS++      STEE
Sbjct: 121 ALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTA------STEE 177

Query: 181 TLEEARRIMEKYK 194
           TLEEAR+IMEKYK
Sbjct: 181 TLEEARKIMEKYK 177

[Close]

BLAST of ClCG07G001710 vs. ExPASy TrEMBL
Match: A0A0A0LCA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G624000 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.1e-51
Identity = 114/142 (80.28%), Postives = 118/142 (83.10%), Query Frame = 0


Query: 1   MASSCLFQNFPSISAHPLKRHRNPAISPHSQFLPTKSLKLKKQSFLLNPQIVKLRTRGSP 60
           MASSCLF NFPSIS HPL RHRNP IS HSQ LP  SLKLK+QSFL NPQI KLRTRGSP
Sbjct: 1   MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSP 60

Query: 61  SFPLVCAAQNNFLRVLFLLEKCCEVFQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIV 120
           SFPLV AAQNNFLR          VFQTV K+GKDGIEAGTDLVPDSVPRPIARISV IV
Sbjct: 61  SFPLVYAAQNNFLR----------VFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIV 120

Query: 121 ALTIGLFLFKSILSTALFVLAM 143
           ALTIGLFLFKS+LSTALFVL +
Sbjct: 121 ALTIGLFLFKSVLSTALFVLVL 132

[Close]

BLAST of ClCG07G001710 vs. TAIR 10
Match: AT4G13220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 87/168 (51.79%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 28  PHSQFL-PTKSLKLKKQSFL-LNPQIVKLRTRGSPSFPLVCAAQNNFLRVLFLLEKCCEV 87
           P+S FL P   LKLK  S L L  +I  L+ +   S  LV +AQ++FL+VL         
Sbjct: 24  PNSPFLSPCSVLKLKNASLLNLRTRIAPLQPQRLRSKTLVLSAQSSFLKVL--------- 83

Query: 88  FQTVLKVGKDGIEAGTDLVPDSVPRPIARISVAIVALTIGLFLFKSILSTALFVLAMMGA 147
            +T   +GKDGIEAGT+LVP SVPRP+ARISV I AL + LF+ KS LSTA FVL  MG 
Sbjct: 84  -RTAWNIGKDGIEAGTNLVPVSVPRPVARISVTIAALAVSLFVVKSFLSTAFFVLGTMGF 143

Query: 148 IYFIFIALNKDEGPRGDGGSSSSSSSSTSPTSTEETLEEARRIMEKYK 194
            YF+FIALNKDE P+  G  +SS S      S ++ LEEA++IM+KYK
Sbjct: 144 AYFLFIALNKDEAPKLRGDDNSSGSK-----SMDDPLEEAKKIMDKYK 176

The following BLAST results are available for this feature:

BLAST of ClCG07G001710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887965.1	1.1e-74	84.97	uncharacterized protein LOC120077928 [Benincasa hispida] >XP_038887966.1 unchara...	[more]
XP_004152015.1	1.2e-73	82.90	uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus] >KAE8650842.1 ...	[more]
XP_008447333.1	2.4e-69	82.38	PREDICTED: uncharacterized protein LOC103489804 [Cucumis melo]	[more]
XP_022159605.1	8.1e-65	77.20	uncharacterized protein LOC111025970 [Momordica charantia]	[more]
KAG6606331.1	1.4e-64	75.13	hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG07G001710 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG07G001710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHT2	1.2e-69	82.38	uncharacterized protein LOC103489804 OS=Cucumis melo OX=3656 GN=LOC103489804 PE=...	[more]
A0A6J1DZ75	3.9e-65	77.20	uncharacterized protein LOC111025970 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1ESP6	8.7e-65	74.61	uncharacterized protein LOC111437405 OS=Cucurbita moschata OX=3662 GN=LOC1114374...	[more]
A0A6J1K1P0	1.6e-63	74.09	uncharacterized protein LOC111491610 OS=Cucurbita maxima OX=3661 GN=LOC111491610...	[more]
A0A0A0LCA2	7.1e-51	80.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G624000 PE=4 SV=1	[more]

BLAST of ClCG07G001710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13220.1	1.8e-30	51.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..179
None	No IPR available	PANTHER	PTHR36777	EXPRESSED PROTEIN	coord: 1..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G001710.2	ClCG07G001710.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane