ClCG07G001690 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG07G001690
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionStress response protein nst1
LocationCG_Chr07: 1844684 .. 1849881 (+)
RNA-Seq ExpressionClCG07G001690
SyntenyClCG07G001690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAAATTAGTGTGGTTGGAATGGGGAGTGTTTTGATGATGCTTGTGGTGGTTGGACTTGTTTTGTTTCTGCCGCTGGTGATCGGTTCCCTTCAGCCGCCGTCCGGCCTCCTGCTGCTCCTTTTTCCGGCCACTCTCGCCGCTGTGTTCTTCTTCCTCTCACGTGCGTCCTCACATTGAAATATTTTGCAGATGATAATCAAATTTTCATGGGGCTGTTTCTTATTTTCCAATAATCTTTGTGTTTTCATATAATAATCATGTAACACAGTATGCATATTTTTCAATAATTGTTAATTAGTGAGAATAATAATATATTCATCGTATTTGCCTCTGAGTATATCTCTCTCTTTTCTTTTTTTTTTGTAATTTAATTATTTAGTTTCTTTTTCTCCCCACAAATCCCTTTTTCTCTTTTGCTCTCATTTGCATTATTATTATAATATTCAGTTCTTAAATTATTGAAGAAAAAATGGATTGATAAACACTAACAATATCTGAATTTTTTAAAATTTTTTAGTGTTTTTAAGGCTTAGACAAAACCCTAATGGGAAGTAATTAAACTAGTTTTTAACACAAACAATGTTTAATGAATGTATTAATTTTTTTTTGCTTTTTAATTTTTCATAAGATGAGCCTTGATGAGTAGAATTTTGAAAAGTTGAAGGAATATAATGAAATAAAACGATATTTTATATTAATATTGGTTGTGTTCTACCTTTGATATAGTTATAGAGTTGATGAAAATAATTTTTAGAGATGATTAAGATGAAATTATTTTAGATTTTGTTTTCTGTTTTTCAAAGAATTATATTATTTTTAGTCCAACTGTCTTTTATAAACTTTTTTCAAACTTTTTTATAAAGATTTATTAAATTCGTAAATAATAATAATAATTAATTAGTTTACATAGAATGGGAAGAATTTTTTTTTTTTTTTGAGATAGTCTACAACCCAACCAAATTGAAACAATGAGATGTAAGTCCACCTATATTAGTTTAATTTTTTTTTATATATTTTATAGAAATTAATCCTTTAGATTGGTTAAATTTATATTTAGATGATATATTAGTAATATGTGTGTTTATAACAATTTAAATGTCTATTAAATTTTGATGGCTTAGATTTGGTAAAAGCATATGATATATTGAAAGTTCATCAAAACTATCTAATCTCAAAATATAATTTATTGCAAAACAAATCTAATAGTATAATTTTATAATACTTTAAGGTAATAATTAACGACACTAAACTATATTAGAAATCGTTAGTTACATTAAATTTAGATGACACGTGTTGATGTATTAAACTACACGTAACATTACGGCAAGAGAGTGTTGACATCATCTCAAAGTTTCATTCATTAATGACAATTTTAAGTTCGTCTTTTATATATATATATATATACTTATATTATATATTATTAGATCTAAGTGAATAACATACAAATTTAACTTGAAAATTGATTAGTTAAGTACATGAATATAATTTAACTTTATTGAATTTATTTGGGAGTAAATCCCTTTATTAATTATTCTTTTTTCAACAATATTTTAATAAAGTTCTATCTCTTCTATATAGACTTTTACTCTCTTAAATATCTACCTCTTTAAGTTTATGATCTTTCTTACTATAGTTATTATTTATTTTTATATTTCCTTTTAAGTTTTAACTAATTGTCCATGTTTCACCATTTATATTTTTTCCATTTAACTTTAATTCCATTTTTAATTCTTATTTAAAACAATTTTTTTTTAGTACAAAGAAAAAATTAAACATAAAAAAGGAACAATAATTACTAGCATTATTTCTAATATTTTTAATTTAAATATACCCTGTTTGACCCACGATTATACTATCAGCCTCACTTTGACATAAATGGCATATCACTTTCTTGATGTACACATGAAATTTAAAGAATTTAATTACTTTAGCAATAGCCCCAACAAATTCATATATATTTGGGTAAGATATATTTTGGTTTCTATATTTTGGGTTTTGTATTTTTAATTTCGGTTCAATTTGGTCTTTGTATTTTTAAAAAATGATTATTTTGGTCATTTCATTTTTACTTTTATTTTATTTTTAAGTGATCAAAATGACCACTTTTTGAAAATTCAAGAACTAAAATGAACTAAAGTTAAAAGTACAATGACCAAAATGAACATTTTGTAAGTATAGAGACCAAAATAATATATGGACCAAAATGAACATTTGGAAAGTACAGAGATTAAAATGAATCAAAGCCAAAAGTATAAGGACTAAAGTAGTATAATGTAACAATCCCAAATCTATTAAATAAAATTTAAGTTATCATGTATGAAAAAGAAAATATGATTGTTTATTCATGCATTTATTTAAGCTAAGATGGAAATTTCAAAATTTGAGTTTAAGGAAATTTTTGGGATTTAGAAAAGGATAAATTTTAGAAAAGGTGATTAAATTTTTGCAAGATTGAATAATTGAAACAAATCTTAGTTGTAGAAGATTTTATTGGATTTTATTTAATTTTATTTTATTTGGTTGGAAAAGAAAAGGGGAAAAGTGGAAGGATTAGGGAGTTAGGGTTTTGTTTTATTTAAACCCTCGGTTTGCGTGCCAATTAAACAAAAAAAAAAAAGAAAAGGAAAAAGAATTTCCTTTTCTCTCTCTCTCTTCCTCGCGCCGCCGCCCCCCCCTCGATTTTTTTTCTTTTTTTTCCTTCTTCTTCTTCTTCTTCGTCTGCTTCTTCTTCTTCACGCACGCCAGCGCCGCCGTGGCCTCCACTCCGGACGACGACCTCTGCCGCACGCTGTCAACCGCCGAACGCGGCCGCTCGTGCCTCGCGTCGACTGAACCGCCGCCGCCGCCGGGCTCTCCGTCGGCAGCTTTCTCTCTCCCTCGCGTCCTGCAGCGCCGCCGCCTCCCAGCGTCAGCCGCTGCCGCCGCTGGTTCTCTCTCTCGCGCCGCCGGTCCTCTTCCGCTGCCGCTTCAGTCAAACGCTCGTCGGACTGCTCGTCACCGAACCGGTAACGTTTGGGTGAGTAACTCGGACCCAAGGTTAATTTGTGGCATAATTTGGTAAACCATGTGTGATATGGACTTATGTGGTTAAAACTCTCTTAGGTGACTGGAAGTTGCGTTGGGTAGAAAGGATTGGAGACAACTGCGAGTTAAGCCACGCTTGGGTAAGGACAGATTTAAAATTTATTTGGAATTAAATGGTGGTGGGACTAGACTTATGGACTGACTTAAGTTGGGAAATTCTATTCGCAATTGTCCAGGAATTTTACAAGAACTGCCGCGTGGTTAATTTGTTGGATAAATCCTCAGGTAAGTGGTCTTACTACTTGAACCGCCTTCCCGCCATATGTTTAGTTGCCATGATGAGTAGAATTTCTAAGCCCCATGTGATATAGTATGCTTGTATGAAATTCCCATGCTTAATGGATGTATGTGAATGATGATGCATATGCTTATAATACGAGATGTTTTAAACAGTACTGTTAATGTATGAATTTATGGAATGAAAGGAGTGATATTTTAATTGACCTATAAGGTGGGTAGTGGTAACTCCCCTACGTCGGTTGGATGTTCACCAGATATTGTGGTCCTTCGGGGTCACCAGAGGTTGTGTTCCTTCGGGTTCACCAGATATTGTGGTCCTTCGGGGTCACCAGAGGTTGTGTACCTTCGGGTTCACCAGAGGTTGTGTACCTTCGGGTTCACCAGAGGTTGTGGTCCTTCGGGGTCACCAGAGGTTGTGTTCCTTCGGGTTCACCAGAGGTTTGTGGTCTTCCGGGATCACCAGAGGTTTTGTGTTCCTTCGGGATCACCAGAGGTAGGAGTTCCTTCGGGGCTCCAGAGGTTAGTGAACATCCAAAGCCAACGGTAGGGCGGGTATAACCAGTTCCCTATAAAAGTACGTTTGAAATGCATGTCTTATTGTTGTTGCACTTAAAGGACTTGAGTGCCTAGCTCGGCTCCGGTAGTGGGGTCACTTACTGAGTAATAAAATTACTCATTCTTTCATCCTTTTTTTTTCAGGTAAGCCAAAGAACGTGCTGGCGAATGACAAGAGGATTCCTTGATGACGTCACGGGACCCGGTGTAGCTTCCGCATAGCACTGCATGTTTCTTTTATAAGTTTTGTCCAATTGTCAAATTTTGTTTTGAGGCTTGCCCTTTTATTTTGTATTTGTCCGTGAAATATTATTGATTTTATCAGGGGTACCCCGAACCAAAACTCTTTTATATGGTTATTCATTCTTTTCTTTGGTTAAATAAACAAAAATTTCCATAAGTAGCATTGTTTCTTTCCTACTACTCAGCATCGTGTCTTTTCTTGAAATTTGCATACATTGAGTAATGGTCTGATTAGGATGTATTAGTCGGGTCGTTACATATAATGACTAAAATAGTATCTAAACTTTAATTAAAAGTCCATTACATAACTATTTTGTTTTTATTTTCTATTTAAAATATTAAACTTATAATTAAAATATAAACATACTACTTATAAGTATATTGTTCTTAGTGACAATTTTGTCCAATAACAAATTGTCATGCGAATAAATTATTGATTTTGAGACTATTTACAAGTTGATATTTGTTTTCAATTGGAATTCAAGACAAAAATATTGGTGGATCCTGATAATCTCACATGTCTTCATCCTAACCATTCGATCAAATAAGTTAGCTTGGTCTAATTGCATCATAATATTTTGGGATAACACATAAGACCTTAATAAAGACCTTATATTATATTTATGTCCAACTTTTCTATTATTTACGAGAATGTCTAGGTAGACTTCTTAATTACACAAATACTAGGGTTCAATTACCTTTTTGTCCTCAACCTATAATCAGTTACACATATTTCAAAAGAAGAAACTCAAAAGTTTCTCTAAACGCAAATTTTATTTTAACCAAAATTTGTTTTCAAAACCCTCACTCACTCTCTCTCTATCCCTCGTCCACCTTCACAGTAGCTCATCGGTGACCACACTAGCGAGCGAAAAGGATGGTGCAAGAGTGGCAGGCGGAATTGGACGACAAACACCGACTTAGACAGTGCTCAACTCGACTGGACAGCGGACGATGAGCGACTTGACTTGACAGCGAATGGCAGCGCGACGACTTGGATGATGGTGGACACACGACGGATGGTCGAACGACGACAAATGGGCATGGACGACGACAGCAATGGGTTCTAG

mRNA sequence

ATGGGAGAAATTAGTGTGGTTGGAATGGGGAGTGTTTTGATGATGCTTGTGGTGGTTGGACTTGTTTTGTTTCTGCCGCTGGTGATCGGTTCCCTTCAGCCGCCGTCCGGCCTCCTGCTGCTCCTTTTTCCGGCCACTCTCGCCGCTGTGTTCTTCTTCCTCTCACGATGGTGCAAGAGTGGCAGGCGGAATTGGACGACAAACACCGACTTAGACAGTGCTCAACTCGACTGGACAGCGGACGATGAGCGACTTGACTTGACAGCGAATGGCAGCGCGACGACTTGGATGATGGTGGACACACGACGGATGGTCGAACGACGACAAATGGGCATGGACGACGACAGCAATGGGTTCTAG

Coding sequence (CDS)

ATGGGAGAAATTAGTGTGGTTGGAATGGGGAGTGTTTTGATGATGCTTGTGGTGGTTGGACTTGTTTTGTTTCTGCCGCTGGTGATCGGTTCCCTTCAGCCGCCGTCCGGCCTCCTGCTGCTCCTTTTTCCGGCCACTCTCGCCGCTGTGTTCTTCTTCCTCTCACGATGGTGCAAGAGTGGCAGGCGGAATTGGACGACAAACACCGACTTAGACAGTGCTCAACTCGACTGGACAGCGGACGATGAGCGACTTGACTTGACAGCGAATGGCAGCGCGACGACTTGGATGATGGTGGACACACGACGGATGGTCGAACGACGACAAATGGGCATGGACGACGACAGCAATGGGTTCTAG

Protein sequence

MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSRWCKSGRRNWTTNTDLDSAQLDWTADDERLDLTANGSATTWMMVDTRRMVERRQMGMDDDSNGF
Homology
[Close]
BLAST of ClCG07G001690 vs. NCBI nr
Match: XP_038888108.1 (uncharacterized protein LOC120078008 [Benincasa hispida])

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-13
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 1  MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR 57
          M + SV GMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLL+FP TLAAVFFFLSR
Sbjct: 1  MEKTSVFGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLIFPVTLAAVFFFLSR 56

[Close]
BLAST of ClCG07G001690 vs. NCBI nr
Match: KAG7011309.1 (hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 82.0 bits (201), Expect = 3.7e-12
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 0 

Query: 1   MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR 57
           MGE SV GMGSVL+MLVVVG +LFLPLVIGS+QPPSGL+LL+FP TLAAVFF LSR
Sbjct: 52  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSR 107

[Close]
BLAST of ClCG07G001690 vs. NCBI nr
Match: XP_008447644.1 (PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo] >KAA0037855.1 stress response protein nst1 [Cucumis melo var. makuwa] >TYK09825.1 stress response protein nst1 [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 3.7e-12
Identity = 48/56 (85.71%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 1  MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR 57
          M E SV GMGSVL+MLVVVGLVLFLPL+IGSLQPPSG LLLLFP TLAAVFF LSR
Sbjct: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSR 56

[Close]
BLAST of ClCG07G001690 vs. NCBI nr
Match: XP_011652820.1 (uncharacterized protein LOC105435116 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-11
Identity = 47/56 (83.93%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 1  MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR 57
          M E  V GMGSVL+MLVVVGLVL LPLVIGSLQPPSG LLLLFP TLAAVFF LSR
Sbjct: 1  MEETGVFGMGSVLIMLVVVGLVLLLPLVIGSLQPPSGFLLLLFPVTLAAVFFILSR 56

[Close]
BLAST of ClCG07G001690 vs. NCBI nr
Match: KAE8650841.1 (hypothetical protein Csa_017605, partial [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 9.2e-11
Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 1  MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLS 56
          M E  V GMGSVL+MLVVVGLVL LPLVIGSLQPPSG LLLLFP TLAAVFF LS
Sbjct: 1  MEETGVFGMGSVLIMLVVVGLVLLLPLVIGSLQPPSGFLLLLFPVTLAAVFFILS 55

[Close]
BLAST of ClCG07G001690 vs. ExPASy TrEMBL
Match: A0A5A7T8Q7 (Stress response protein nst1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001370 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 48/56 (85.71%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 1  MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR 57
          M E SV GMGSVL+MLVVVGLVLFLPL+IGSLQPPSG LLLLFP TLAAVFF LSR
Sbjct: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSR 56

[Close]
BLAST of ClCG07G001690 vs. ExPASy TrEMBL
Match: A0A1S3BHY2 (uncharacterized protein LOC103490051 OS=Cucumis melo OX=3656 GN=LOC103490051 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 48/56 (85.71%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 1  MGEISVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR 57
          M E SV GMGSVL+MLVVVGLVLFLPL+IGSLQPPSG LLLLFP TLAAVFF LSR
Sbjct: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSR 56

The following BLAST results are available for this feature:
BLAST of ClCG07G001690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888108.12.0e-1389.29uncharacterized protein LOC120078008 [Benincasa hispida][more]
KAG7011309.13.7e-1282.14hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_008447644.13.7e-1285.71PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo] >KAA0037855.1 str... [more]
XP_011652820.12.4e-1183.93uncharacterized protein LOC105435116 [Cucumis sativus][more]
KAE8650841.19.2e-1183.64hypothetical protein Csa_017605, partial [Cucumis sativus][more]
BLAST of ClCG07G001690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG07G001690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T8Q71.8e-1285.71Stress response protein nst1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3BHY21.8e-1285.71uncharacterized protein LOC103490051 OS=Cucumis melo OX=3656 GN=LOC103490051 PE=... [more]
BLAST of ClCG07G001690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G001690.2ClCG07G001690.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane