ClCG07G001660 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTGCAGCGTCGACCAAAGCTATAACGCCATTGACGCCAATGACAGTGACGATTTGAACCAACAAACAAATGATAATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGGTCAACCATTTTACTATTGAAGCTTTACATGTTTTGGTTTAATCAAATCTCATTTTGATTTGTATTTTGTTGTCTTGCTATATTTTAAGAATATTTTCAAAATTTCAACTGAATTCTAAAAAATTAATTAGAATTTGTTTGATAACTATTTGAAGGTCTCATTTAATTAACCATTTGAGTTTTTAGGTTTTTGTTTTTTAATATTGAACCTATAAAAACACTTTAAAATGTTGGTTGCATTTTAAGAGTGTTTTCACAACCAAATCCAACATTTGAAAACTGAAATAAATAAATAAATAAATAAATAAATAAATATAGTTTTCAAAATTTTGTTTTTGTTTTTAAATATTGGTGCCTAAGAATTCTTTATCCTAATGTTTACGCCCTGGGAAATATGAAAATCACGAGTATTGTAAGAAAACAAACACAACTTTCAAAAACCAAATGGGTCTTGGTATTTTGTTTTTGAAAATTGTTATTATTGTTGTCTCACAATTTCTTAATATATTTTCATCTTTCCTTAATAAAGATTTGAATTTTTAGTCGAATTTTTAAAATAAAAATATATTTTTAAAAACTTTTTTTTTTTTCAGTTTTCAAAATTTTTATTGGATTTTAACAACAAAATAAAGAGACCACATCCAGTTTTGGTAAGTTTTGGTTTATAAAACCAAATAGATAAAGGGAACCTAAAAAGGTAGTTTATAAAAAACGTTTTTGTTTTAGGAATTTTGCTAAGAATTTAGTACATATTTAGATAGAAAAAAATTAAAACTACGATTAAGAAATTGTCAAAGACCAAATCTAATTTTTTAAAAAAATAAAATTCAAATAGTTATCAAATAGGCCTAAAATTGTTCACTTTAGCATTTTTTAACTTTTAAATATTTGGTATTTGAAATTTTCAAAATGTTTCTATTTTAGTTTATAAACATTAAGAAACATAAAATAAAGAAAAGCTATTGATGTATTGTTTCTTCTTTTAATATCTACTAACCAAAGTGGCTTGAAATTAGTATGGTAGTACACATCTTCAAAGTTTTGTCATTTAATTTGTTAAAAACAAGAGAAACAAAAATACTTTTTATAAGAATAATTGTGAATTAGACATTTTAAATGTTTAGGAACTAAAATAAAACGGATCTGGAAGTTCAATAATTTTTTTTAAATATTTGATTGATTAAAAAAAATAAAACGAACTGTCAAAGTGCGTTTAGCTAAACGGTAATTGACATGGTCTTTTTCCCTAAAAGTTGGAGGTTCGTCGATCCCCCATGCTCGCAGTTTTGGAATATGTTATTTGTTTTTTTTTTTTTGGTTTTTTTTTTTTTGTTATGGAGTTTGAATACAATGTGTGACATAAAGTTCAGGATCCACCACTGATTTCAGGTGAGCAAGTGGTCACCAACGAAAAGAGCTATTGGTGGAGCTTTAAGGAGAATTTTGGTGGAACATCGTTGTATTGGTGCAACTTTGGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGATCATCATGGCTTGAAGATCATTGCACCAATTCAAACTGTATTTGGGCAGCTAGAGACGATGGCTTTTACTTGTATAATGGCATGCAAAACCAATTTGAACTCAAATTCATGCGTGGACATAAAGATGTCGGAAAATAA ATGTTTTGCAGCGTCGACCAAAGCTATAACGCCATTGACGCCAATGACAGTGACGATTTGAACCAACAAACAAATGATAATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGTTCAGGATCCACCACTGATTTCAGGTGAGCAAGTGGTCACCAACGAAAAGAGCTATTGGTGGAGCTTTAAGGAGAATTTTGGTGGAACATCGTTGTATTGGTGCAACTTTGGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGATCATCATGGCTTGAAGATCATTGCACCAATTCAAACTGTATTTGGGCAGCTAGAGACGATGGCTTTTACTTGTATAATGGCATGCAAAACCAATTTGAACTCAAATTCATGCGTGGACATAAAGATGTCGGAAAATAA ATGTTTTGCAGCGTCGACCAAAGCTATAACGCCATTGACGCCAATGACAGTGACGATTTGAACCAACAAACAAATGATAATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGTTCAGGATCCACCACTGATTTCAGGTGAGCAAGTGGTCACCAACGAAAAGAGCTATTGGTGGAGCTTTAAGGAGAATTTTGGTGGAACATCGTTGTATTGGTGCAACTTTGGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGATCATCATGGCTTGAAGATCATTGCACCAATTCAAACTGTATTTGGGCAGCTAGAGACGATGGCTTTTACTTGTATAATGGCATGCAAAACCAATTTGAACTCAAATTCATGCGTGGACATAAAGATGTCGGAAAATAA MFCSVDQSYNAIDANDSDDLNQQTNDNPLFTHCKSKDDDLVQDPPLISGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQFELKFMRGHKDVGK Homology
BLAST of ClCG07G001660 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 2.0e-20 Identity = 56/109 (51.38%), Postives = 66/109 (60.55%), Query Frame = 0
BLAST of ClCG07G001660 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 2.0e-20 Identity = 56/109 (51.38%), Postives = 66/109 (60.55%), Query Frame = 0
BLAST of ClCG07G001660 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 107.8 bits (268), Expect = 7.4e-20 Identity = 55/109 (50.46%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of ClCG07G001660 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 107.8 bits (268), Expect = 7.4e-20 Identity = 55/109 (50.46%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of ClCG07G001660 vs. NCBI nr
Match: KAE8652336.1 (hypothetical protein Csa_021865 [Cucumis sativus]) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-19 Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10 Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09 Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09 Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy TrEMBL
Match: A0A6P4ABD6 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19 Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy TrEMBL
Match: A0A1S3C8Z6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19 Identity = 54/111 (48.65%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy TrEMBL
Match: A0A6P4B1H1 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426491 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 3.0e-19 Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy TrEMBL
Match: A0A6J5VTZ1 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51617 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19 Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of ClCG07G001660 vs. ExPASy TrEMBL
Match: A0A6J1C659 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111008788 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19 Identity = 54/103 (52.43%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of ClCG07G001660 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11 Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = 0
BLAST of ClCG07G001660 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10 Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 0
BLAST of ClCG07G001660 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10 Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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