ClCG06G016850 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG06G016850
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionubiquitin-conjugating enzyme E2 5-like
LocationCG_Chr06: 29994371 .. 29998310 (+)
RNA-Seq ExpressionClCG06G016850
SyntenyClCG06G016850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGTTCTTGTTTGGTACTTTGATGAATAGATGAAACTTATTGAAATGAGAGAAAAAATGAGATCCTGCGAATTGGGTTTGTTGGTGGAGGGTTCAGGATTCTAGTTGTCCTTTGTTGTGATTATCATGCGGAGATTTTAGCTGTTTGGTGTGGATCGTGTTCATACCAACCAGACATTGCCTTGTTTGATCATGTTGTGATCACCCACCAGGCCTTTTGTATTTGATTTTATTAGTTTCTTATCAGGTAATTGAATCCAGAATTCCAATTCTTTGTTCCTGATCATTATTAGTTGCATGGTTAGTATGGCTTGTTTTATCTAGTGGTGAGTGATTATGAATCAGAACAATGTGGTAATTTTTGGACCAGTTTGTACGAAGCCTCATTTTCACGTTTCTGGTGATTGATGTTTGGGACATGAACTTCCGAGGCAGGCTTGTTTTGGATTAGAGATGCAACGTTTGAACGATATCAGCTCATGGATACTCTGTACTATTTGTTGTTAGTGATGCAACCAAATCAATATGAATGAAGACTTGATCTTGGATTTTTTCATTTGTTGTTCCTTTGGTTTTCTTTCTGATTGCAAACTATCCTCTTGGGTGTAGCCTGTAGAAATATGACAATCTAATAAAGAGCTTTAAGTCTGTATCAACTTCCCAGGCTAACGATGCTGATACTTTGTCTAAAAGAAAAAAAACATCATATTAATATAAATTCAAATTCAGATAAGTAGACCGTACAGGTTTGCCTGTATTAGTGGTGTGGGATTCATTTTTTTACATAGTGTATTAGCTGGTTTCTTTACTATTTTGAGATTTATTCTTAATTGGCTTATGTGAAAACGCGGTTACAGCTGCCCCAAGTCTTTTTCACTTCATTTTTTTTACATTTAAAAAGTCATTAGTAACTTCTAACGTTCAATAATATGAGTCTGTTGCAGATTTTGGAAGCGCAGCTCATTCACAATGTCTTCTCCAAGCAAAAGAAGAGAAATGGATGTCATGAAATTGTAAGATTGACACCCTTGTTATTTATCAAGATTTCATATTCTTATTTCAGTCATTAGTTATTGTGGTTGTTCTATGTGGTCTTTATGGATGGCTGTATATGAGCCTTCCAACAACCAAGAAGATGTCATTTTGAAAATGAAAATGATCTACTAGTACTGCAATAGGATAGAGGAAAGTAAAATATGTTAATATTGCCCATGGAGTTCTTCTGTTCCATGTTTTATTTACAAAAAGAATATCGAAGCTTTTTTGTAACTTTGATTTTTATGCAAATATATAATTCTCTATTTGTAGACACTTATACTTCATCCTTATCACACCCCCTCCCCAACAATAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAGGAAAAGAAAGGACTCTTCTCATTGCAAGGGTTCTTCATTTTAGTGACATGGCTAATTAATGTGTCGATGCTTCCAATGTTCTTTGTCGTAATATTTCTTAACATTTTTGGTTGTCGCTTAGTCTTGCCTTTTGTGTTCCTAATCATATGAAGCTAGGTAAATTCACTGGTCTGCGTTTATTTATTGCCCTTGAATGTAGTGATGATTACAGTGACCTGTGACCGAGAGTGACCGTACTTGGGGTTGTAATAATGGTTGCAGCAAAAGTAGCGCTTATCTTGTTGTTGTTATGTGCCATAGAAAACATATTGGGCATGCTGGCTTAGAACTGGCCCGAATTGGGGTATTTTCAGGTTTTGAGTTTGACTATTATTCACTATTATGCCTGTAGACCGTTGAATGGCATCTTGAAGTTGTGCTATCTCTTAATCCAAAATGTGTAACTGAGGTCCTTTTAAGGGTTGATAAATACTGTGTGATAACATGGATTAGATTCCTAATATTGTATGATATCTCTGAAATTCTATTACTAACTCATGCAACAATGATGGTCACAAATTTCTGTTGGTTTATCTTGTGGTTCATGTTACATCGGCTTATGTTCTCCAGGATGATGAGTGACTACAATGTGGAGATGATAAATGACGGACTCAGTGAATTCAATGTGGAGTTCCATGGTCCCAAAGAAAGTATTGCTCGACTTTCACCTCTGTCCAATATGCATTTCATAGTCGTTGATGGAATAGCAATTATTCGTTTGTGGGTGTGTATGAGCATTATTGGATTGCAAATGAACAATTTAGCAAACTTGCCCGCAGTCTAAAGCCAATTCTTTTGTCTTGTTTGGAGTCTCCTGAAAATTTATCCTTGAAGTGAGGTGTTTCTACTGCTTTCCTGTGTAATTTATGGACACTTGATGCTGTTTACTGTTTCACTTAACATTGGTGAGTAAGAGCTGCAGCCTGTTCCTAAAGAGTTTTAATCCATGAAGAAAACTGTGCTTTTGGCTGTTCAAAAGATTGTGAAAGTACATCAGCATGTGGTTTAGTTACTATTCGGATTCCACTTAGCTCTAAAAGGTATAAAGTTTGGACCATAGATGACTTCAAACTCTGAATAGAAATGAACTTTTTGGTTTTATTTACAAGGAAATGTCAACTGGAAACATAATATGCATCTAGTTTTGCTGCATGTTTTCATTTAATGAATTATTTTTCACGACATTTGGGTCTAGAGCTGCAATAAGTTAATTATCTTTCGATAAGTATTTTCTTACTTAAGTTTCATTGTCCCTGCAGGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTCGAGCTACCTGATGCATATCCATATAAGTCTCCTTCAATTGGTTTTGTGAACAAGATATTCCACCCAAATGTTGACGAACTGTAAGGAAGTGTATTCTTTTTCTAAACCATCAAATAAAATCGATTGAATGCTTCACCTGTTCGTAGTAAAGTAATTAACATGCAACTTTTACCTGCAGATCTGGTTCTGTGTGCTTAGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGGTAATTCCATCCTTGCTATATCTCTATTAACACTTTACTAGATTCCATAGCATTTTCTACTTATGACTTCTGTAATAAAATGTTATTGCACAATAGCTTTTGATGTGTTTGGAAATATAATTTAACATCCATGGGACCATAGGAATTGGATTGAGACTCTCAAAATATACGACTAAGTTTGTGTTTATTCTTGCCTTCTTTCTGTTGGGTTTTGCAGATCTCTTAAACGTTTTTGAGGTTTTTCTTCCCCAGCTTCTCCTTTATCCCAACCCTTCCGACCCCCTTAATGGTGACGCAGCGTCGCTTATGATGAAGGACCGGAAGCAGTATGACGAAAAAGTTAAAGGTATTTATATTTCACTGAACAACTTTTCTAATCCCATGCCACAACTTTCTCCATTTAATTTAAAATGAACTTTCGCTCCGAAAATCAAAGTTGGGAGTCAAGATTCCCAATGTAAGTGGATACACTTTCTTGCAAACTTTGTCTAAAGTACAAAATGTTATTCTGCTTCTTAAAGTGTTTAGATGACGAGAGATTTTGGCCCCTCTCTTGGTCCGAACAATTACTTTCTTAAATGATAACTCAAAATCTACTTCCTTAAATGATAACTCAATATCTACTTCCATGTGCATACAGAGTACTGCGAACGATATGCGAAGAAGGAGAATGACATTAAATGCACAGCAGAAGATGAGAGTGAAGAGGATGAAATCAGCAATAATGAAAGCGGTTCAAGCGATGATGATGTTGCTGGACATGCTGATCCCTAACTGGAAGCAAGGCATTATATGAATCAATTCTTCATTTAGTAGCAGCAAGTGAATTTACATGTTTGGTTTTCCTATATTTTTACTGGTTGGTATGATCATAACGAAAATACCCAACAAAGGTTTAGATAATTCTTAGATTGAAGGACTTGAAATGTATAAGCTGTCCAGTAGGGGACATTAAAGCAAGGTGACAATATTTTATCAGTTAATGAAA

mRNA sequence

ATGAGGGGTTCTTGTTTGTATGGCTTGTTTTATCTAGTGGTGAGTGATTATGAATCAGAACAATGTGTCATTAGTTATTGTGGTTGTTCTATGTGGTCTTTATGGATGGCTGTATATGAGCCTTCCAACAACCAAGAAGATGTCATTTTGAAAATGAAAATGATCTACTACAAAAGTAGCGCTTATCTTGTTGTTGTTATGTGCCATAGAAAACATATTGGGCATGCTGGCTTAGAACTGGCCCGAATTGGGGTATTTTCAGGTTTTGAGATGATGAGTGACTACAATGTGGAGATGATAAATGACGGACTCAGTGAATTCAATGTGGAGTTCCATGGTCCCAAAGAAAGTATTGCTCGACTTTCACCTCTGTCCAATATGCATTTCATAGTCGTTGATGGAATAGCAATTATTCGTTTGTGGGTGTGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTCGAGCTACCTGATGCATATCCATATAAGTCTCCTTCAATTGGTTTTGTGAACAAGATATTCCACCCAAATGTTGACGAACTATCTGGTTCTGTGTGCTTAGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGATCTCTTAAACGTTTTTGAGGTTTTTCTTCCCCAGCTTCTCCTTTATCCCAACCCTTCCGACCCCCTTAATGGTGACGCAGCGTCGCTTATGATGAAGGACCGGAAGCAGTATGACGAAAAATTGGGAGTCAAGATTCCCAATGTAAGTGGATACACTTTCTTGCAAACTTTGTCTAAAGTACAAAATGTTATTCTGCTTCTTAAAAGTACTGCGAACGATATGCGAAGAAGGAGAATGACATTAAATGCACAGCAGAAGATGAGAGTGAAGAGGATGAAATCAGCAATAATGAAAGCGGTTCAAGCGATGATGATGTTGCTGGACATGCTGATCCCTAACTGGAAGCAAGGCATTATATGAATCAATTCTTCATTTAGTAGCAGCAAGTGAATTTACATGTTTGGTTTTCCTATATTTTTACTGGTTGGTATGATCATAACGAAAATACCCAACAAAGGTTTAGATAATTCTTAGATTGAAGGACTTGAAATGTATAAGCTGTCCAGTAGGGGACATTAAAGCAAGGTGACAATATTTTATCAGTTAATGAAA

Coding sequence (CDS)

ATGAGGGGTTCTTGTTTGTATGGCTTGTTTTATCTAGTGGTGAGTGATTATGAATCAGAACAATGTGTCATTAGTTATTGTGGTTGTTCTATGTGGTCTTTATGGATGGCTGTATATGAGCCTTCCAACAACCAAGAAGATGTCATTTTGAAAATGAAAATGATCTACTACAAAAGTAGCGCTTATCTTGTTGTTGTTATGTGCCATAGAAAACATATTGGGCATGCTGGCTTAGAACTGGCCCGAATTGGGGTATTTTCAGGTTTTGAGATGATGAGTGACTACAATGTGGAGATGATAAATGACGGACTCAGTGAATTCAATGTGGAGTTCCATGGTCCCAAAGAAAGTATTGCTCGACTTTCACCTCTGTCCAATATGCATTTCATAGTCGTTGATGGAATAGCAATTATTCGTTTGTGGGTGTGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTCGAGCTACCTGATGCATATCCATATAAGTCTCCTTCAATTGGTTTTGTGAACAAGATATTCCACCCAAATGTTGACGAACTATCTGGTTCTGTGTGCTTAGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGATCTCTTAAACGTTTTTGAGGTTTTTCTTCCCCAGCTTCTCCTTTATCCCAACCCTTCCGACCCCCTTAATGGTGACGCAGCGTCGCTTATGATGAAGGACCGGAAGCAGTATGACGAAAAATTGGGAGTCAAGATTCCCAATGTAAGTGGATACACTTTCTTGCAAACTTTGTCTAAAGTACAAAATGTTATTCTGCTTCTTAAAAGTACTGCGAACGATATGCGAAGAAGGAGAATGACATTAAATGCACAGCAGAAGATGAGAGTGAAGAGGATGAAATCAGCAATAATGAAAGCGGTTCAAGCGATGATGATGTTGCTGGACATGCTGATCCCTAACTGGAAGCAAGGCATTATATGA

Protein sequence

MRGSCLYGLFYLVVSDYESEQCVISYCGCSMWSLWMAVYEPSNNQEDVILKMKMIYYKSSAYLVVVMCHRKHIGHAGLELARIGVFSGFEMMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKLGVKIPNVSGYTFLQTLSKVQNVILLLKSTANDMRRRRMTLNAQQKMRVKRMKSAIMKAVQAMMMLLDMLIPNWKQGII
Homology
[Close]
BLAST of ClCG06G016850 vs. NCBI nr
Match: KAG6587482.1 (Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.1 bits (788), Expect = 8.6e-80
Identity = 146/150 (97.33%), Postives = 149/150 (99.33%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDYNVEMINDGL+EFNVEFHGPKESIARLSPLSNMHF+VVDGIAII LWVCLYETGVW
Sbjct: 16  MMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVCLYETGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 76  KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYDEK+
Sbjct: 136 LLLYPNPSDPLNGDAASLMMKDRKQYDEKV 165

[Close]
BLAST of ClCG06G016850 vs. NCBI nr
Match: XP_022921686.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 1.9e-63
Identity = 133/186 (71.51%), Postives = 137/186 (73.66%), Query Frame = 0 

Query: 67  MCHRKHIGHAGLELARIGVFSG------------FEMMSDYNVEMINDGLSEFNVEFHGP 126
           M  RKHI HA LEL  I V S               MMSDYNVEMINDGL+EFNV+FHGP
Sbjct: 1   MLTRKHIDHARLELPSIVVISEGALSLTLRWLVLSRMMSDYNVEMINDGLNEFNVDFHGP 60

Query: 127 KESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIF 186
           K+S                          LYETGVWKIRVELPDAYPYKSPSIGFVNKIF
Sbjct: 61  KQS--------------------------LYETGVWKIRVELPDAYPYKSPSIGFVNKIF 120

Query: 187 HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRK 241
           HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRK
Sbjct: 121 HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRK 160

[Close]
BLAST of ClCG06G016850 vs. NCBI nr
Match: XP_038880248.1 (ubiquitin-conjugating enzyme E2-23 kDa-like [Benincasa hispida])

HSP 1 Score: 247.3 bits (630), Expect = 1.8e-61
Identity = 123/150 (82.00%), Postives = 124/150 (82.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDYNVEMINDGLSEFNVEFHGPKES                          LYETGVW
Sbjct: 16  MMSDYNVEMINDGLSEFNVEFHGPKES--------------------------LYETGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 76  KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYDEK+
Sbjct: 136 LLLYPNPSDPLNGDAASLMMKDRKQYDEKV 139

[Close]
BLAST of ClCG06G016850 vs. NCBI nr
Match: XP_040990756.1 (ubiquitin-conjugating enzyme E2 5-like isoform X3 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 246.9 bits (629), Expect = 2.3e-61
Identity = 119/150 (79.33%), Postives = 131/150 (87.33%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY VE INDGL+EFNVEFHGPKESI  +  L   H +    I +  +++ LYE G+W
Sbjct: 16  MMSDYTVETINDGLNEFNVEFHGPKESIFLILRLLFPHNV----IYVCNVFIGLYEGGIW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           K+RVELPDAYPYKSPSIGFVNKI+HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 76  KVRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYD+K+
Sbjct: 136 LLLYPNPSDPLNGDAASLMMKDRKQYDQKV 161

[Close]
BLAST of ClCG06G016850 vs. NCBI nr
Match: XP_040990753.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 246.9 bits (629), Expect = 2.3e-61
Identity = 119/150 (79.33%), Postives = 131/150 (87.33%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY VE INDGL+EFNVEFHGPKESI  +  L   H +    I +  +++ LYE G+W
Sbjct: 16  MMSDYTVETINDGLNEFNVEFHGPKESIFLILRLLFPHNV----IYVCNVFIGLYEGGIW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           K+RVELPDAYPYKSPSIGFVNKI+HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 76  KVRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYD+K+
Sbjct: 136 LLLYPNPSDPLNGDAASLMMKDRKQYDQKV 161

[Close]
BLAST of ClCG06G016850 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-53
Identity = 100/150 (66.67%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY VEMINDG+ EF VEF GPK+SI                          YE GVW
Sbjct: 16  MMSDYKVEMINDGMQEFFVEFSGPKDSI--------------------------YEGGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPS+GF+ KI+HPNVDE+SGSVCLDVINQ+WSPMFDL+NVFE FLPQ
Sbjct: 76  KIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNG+AA+LMM+DR  Y++++
Sbjct: 136 LLLYPNPSDPLNGEAAALMMRDRPTYEQRV 139

[Close]
BLAST of ClCG06G016850 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 7.1e-53
Identity = 99/150 (66.00%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY VE INDG+ EF VEF+GPK+S                          LY+ GVW
Sbjct: 16  MMSDYKVETINDGMQEFYVEFNGPKDS--------------------------LYQGGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPS+GF+ KI+HPNVDELSGSVCLDVINQ+WSPMFDL+NVFE FLPQ
Sbjct: 76  KIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNG+AA+LMM+DR  Y++++
Sbjct: 136 LLLYPNPSDPLNGEAAALMMRDRPAYEQRV 139

[Close]
BLAST of ClCG06G016850 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-52
Identity = 98/150 (65.33%), Postives = 114/150 (76.00%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY V+MINDG+ EF V FHGPK+SI                          Y+ GVW
Sbjct: 16  MMSDYKVDMINDGMHEFFVHFHGPKDSI--------------------------YQGGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           K+RVEL +AYPYKSPSIGF NKI+HPNVDE+SGSVCLDVINQ+WSPMFDL+N+FEVFLPQ
Sbjct: 76  KVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNG+AASLMM+D+  Y+ K+
Sbjct: 136 LLLYPNPSDPLNGEAASLMMRDKNAYENKV 139

[Close]
BLAST of ClCG06G016850 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 1.4e-48
Identity = 93/150 (62.00%), Postives = 109/150 (72.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY V+ +ND L  F V FHGP +S                          LY+ GVW
Sbjct: 16  MMSDYKVDTVNDDLQMFYVTFHGPTDS--------------------------LYQGGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KI+VELP+AYPYKSPS+GFVNKI+HPNVDE SG+VCLDVINQ+WSPMFDL+NVFE FLPQ
Sbjct: 76  KIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDP NG+AASL+M+DR  Y+ K+
Sbjct: 136 LLLYPNPSDPFNGEAASLLMRDRAAYELKV 139

[Close]
BLAST of ClCG06G016850 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.7e-44
Identity = 83/150 (55.33%), Postives = 104/150 (69.33%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           +MSDY V ++ND + EF V FHGP E+                           Y  G+W
Sbjct: 16  LMSDYEVTLVNDNMQEFYVRFHGPSET--------------------------PYSGGIW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           K+ VELP  YP+KSPSIGFVN+IFHPN+DELSGSVCLDVINQ+WSPMFD++N+FEVFLPQ
Sbjct: 76  KVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LL YPN SDPLNG+AA+L++++   Y  K+
Sbjct: 136 LLRYPNASDPLNGEAAALLLREPNTYYAKV 139

[Close]
BLAST of ClCG06G016850 vs. ExPASy TrEMBL
Match: A0A6J1E228 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429862 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 9.3e-64
Identity = 133/186 (71.51%), Postives = 137/186 (73.66%), Query Frame = 0 

Query: 67  MCHRKHIGHAGLELARIGVFSG------------FEMMSDYNVEMINDGLSEFNVEFHGP 126
           M  RKHI HA LEL  I V S               MMSDYNVEMINDGL+EFNV+FHGP
Sbjct: 1   MLTRKHIDHARLELPSIVVISEGALSLTLRWLVLSRMMSDYNVEMINDGLNEFNVDFHGP 60

Query: 127 KESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIF 186
           K+S                          LYETGVWKIRVELPDAYPYKSPSIGFVNKIF
Sbjct: 61  KQS--------------------------LYETGVWKIRVELPDAYPYKSPSIGFVNKIF 120

Query: 187 HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRK 241
           HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRK
Sbjct: 121 HPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRK 160

[Close]
BLAST of ClCG06G016850 vs. ExPASy TrEMBL
Match: A0A6J1HYC1 (ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita maxima OX=3661 GN=LOC111467979 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61
Identity = 122/150 (81.33%), Postives = 124/150 (82.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDYNVEMINDGL+EFNVEFHGPKES                          LYETGVW
Sbjct: 107 MMSDYNVEMINDGLNEFNVEFHGPKES--------------------------LYETGVW 166

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 167 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 226

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYDEK+
Sbjct: 227 LLLYPNPSDPLNGDAASLMMKDRKQYDEKV 230

[Close]
BLAST of ClCG06G016850 vs. ExPASy TrEMBL
Match: A0A6J1EK00 (ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita moschata OX=3662 GN=LOC111435047 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61
Identity = 122/150 (81.33%), Postives = 124/150 (82.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDYNVEMINDGL+EFNVEFHGPKES                          LYETGVW
Sbjct: 107 MMSDYNVEMINDGLNEFNVEFHGPKES--------------------------LYETGVW 166

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 167 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 226

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYDEK+
Sbjct: 227 LLLYPNPSDPLNGDAASLMMKDRKQYDEKV 230

[Close]
BLAST of ClCG06G016850 vs. ExPASy TrEMBL
Match: A0A6J1C0G2 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007210 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 7.4e-61
Identity = 121/150 (80.67%), Postives = 123/150 (82.00%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDYNVEMINDGL+EFNVEFHGPKES                          LYE GVW
Sbjct: 16  MMSDYNVEMINDGLNEFNVEFHGPKES--------------------------LYEAGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 76  KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYDEK+
Sbjct: 136 LLLYPNPSDPLNGDAASLMMKDRKQYDEKV 139

[Close]
BLAST of ClCG06G016850 vs. ExPASy TrEMBL
Match: A0A6J1BZX4 (ubiquitin-conjugating enzyme E2 5-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007210 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 7.4e-61
Identity = 121/150 (80.67%), Postives = 123/150 (82.00%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDYNVEMINDGL+EFNVEFHGPKES                          LYE GVW
Sbjct: 16  MMSDYNVEMINDGLNEFNVEFHGPKES--------------------------LYEAGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ
Sbjct: 76  KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNGDAASLMMKDRKQYDEK+
Sbjct: 136 LLLYPNPSDPLNGDAASLMMKDRKQYDEKV 139

[Close]
BLAST of ClCG06G016850 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-54
Identity = 100/150 (66.67%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY VEMINDG+ EF VEF GPK+SI                          YE GVW
Sbjct: 16  MMSDYKVEMINDGMQEFFVEFSGPKDSI--------------------------YEGGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPS+GF+ KI+HPNVDE+SGSVCLDVINQ+WSPMFDL+NVFE FLPQ
Sbjct: 76  KIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNG+AA+LMM+DR  Y++++
Sbjct: 136 LLLYPNPSDPLNGEAAALMMRDRPTYEQRV 139

[Close]
BLAST of ClCG06G016850 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 209.1 bits (531), Expect = 5.0e-54
Identity = 99/150 (66.00%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY VE INDG+ EF VEF+GPK+S                          LY+ GVW
Sbjct: 16  MMSDYKVETINDGMQEFYVEFNGPKDS--------------------------LYQGGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KIRVELPDAYPYKSPS+GF+ KI+HPNVDELSGSVCLDVINQ+WSPMFDL+NVFE FLPQ
Sbjct: 76  KIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDPLNG+AA+LMM+DR  Y++++
Sbjct: 136 LLLYPNPSDPLNGEAAALMMRDRPAYEQRV 139

[Close]
BLAST of ClCG06G016850 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 194.9 bits (494), Expect = 9.9e-50
Identity = 93/150 (62.00%), Postives = 109/150 (72.67%), Query Frame = 0 

Query: 91  MMSDYNVEMINDGLSEFNVEFHGPKESIARLSPLSNMHFIVVDGIAIIRLWVCLYETGVW 150
           MMSDY V+ +ND L  F V FHGP +S                          LY+ GVW
Sbjct: 16  MMSDYKVDTVNDDLQMFYVTFHGPTDS--------------------------LYQGGVW 75

Query: 151 KIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQ 210
           KI+VELP+AYPYKSPS+GFVNKI+HPNVDE SG+VCLDVINQ+WSPMFDL+NVFE FLPQ
Sbjct: 76  KIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQ 135

Query: 211 LLLYPNPSDPLNGDAASLMMKDRKQYDEKL 241
           LLLYPNPSDP NG+AASL+M+DR  Y+ K+
Sbjct: 136 LLLYPNPSDPFNGEAASLLMRDRAAYELKV 139

[Close]
BLAST of ClCG06G016850 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-15
Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 0 

Query: 145 YETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVF 204
           Y  GV+ + +  P  YP+K P + F  K+FHPNV+  +GS+CLD++ + WSP   +  V 
Sbjct: 45  YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVL 104

Query: 205 EVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYD 238
            + +  LL  PNP DPL  + A +   DR +Y+
Sbjct: 105 -LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135

[Close]
BLAST of ClCG06G016850 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-15
Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 0 

Query: 145 YETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVF 204
           Y  GV+ + +  P  YP+K P + F  K+FHPNV+  +GS+CLD++ + WSP   +  V 
Sbjct: 45  YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVL 104

Query: 205 EVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYD 238
            + +  LL  PNP DPL  + A +   DR +Y+
Sbjct: 105 -LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135

The following BLAST results are available for this feature:
BLAST of ClCG06G016850 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6587482.18.6e-8097.33Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022921686.11.9e-6371.51ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Cucurbita moschata][more]
XP_038880248.11.8e-6182.00ubiquitin-conjugating enzyme E2-23 kDa-like [Benincasa hispida][more]
XP_040990756.12.3e-6179.33ubiquitin-conjugating enzyme E2 5-like isoform X3 [Juglans microcarpa x Juglans ... [more]
XP_040990753.12.3e-6179.33ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Juglans microcarpa x Jug... [more]
BLAST of ClCG06G016850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427492.4e-5366.67Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S... [more]
P427487.1e-5366.00Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S... [more]
P165771.6e-5265.33Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1... [more]
P427501.4e-4862.00Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S... [more]
Q9P7R42.7e-4455.33Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
BLAST of ClCG06G016850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E2289.3e-6471.51ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Cucurbita moschata OX=... [more]
A0A6J1HYC11.9e-6181.33ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita maxima OX=3661 GN=LOC1114679... [more]
A0A6J1EK001.9e-6181.33ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1C0G27.4e-6180.67ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Momordica charantia OX... [more]
A0A6J1BZX47.4e-6180.67ubiquitin-conjugating enzyme E2 5-like isoform X2 OS=Momordica charantia OX=3673... [more]
BLAST of ClCG06G016850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G63800.11.7e-5466.67ubiquitin-conjugating enzyme 5 [more]
AT5G41340.15.0e-5466.00ubiquitin conjugating enzyme 4 [more]
AT2G46030.19.9e-5062.00ubiquitin-conjugating enzyme 6 [more]
AT1G64230.11.2e-1538.71ubiquitin-conjugating enzyme 28 [more]
AT1G64230.21.2e-1538.71ubiquitin-conjugating enzyme 28 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 115..249
e-value: 2.8E-28
score: 109.9
NoneNo IPR availablePANTHERPTHR24068:SF332UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKEcoord: 143..240
coord: 88..119
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 143..240
coord: 88..119
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 89..247
e-value: 4.4E-35
score: 122.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 143..240
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 143..240
e-value: 8.1E-31
score: 106.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 86..249
score: 30.524265
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 90..239
e-value: 2.47244E-40
score: 136.178
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 174..190

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G016850.2ClCG06G016850.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity