ClCG06G016630 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G016630
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-type domain-containing protein
Location	CG_Chr06: 29833517 .. 29835344 (+)
RNA-Seq Expression	ClCG06G016630
Synteny	ClCG06G016630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTCTCTCTCTCTCTTTCTCTCCCCCGAAGATCTTCTCTCTCCCGGAAAAAATATCCACACAAATTAGGGTTTCTTTGTGACCTTCGTTCCTTCAATTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTGAGGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTATATATCTATCTATCTATCTGTTCAGACGTAAATCTTCTTGTTTTTTTCTTTTAATTTTAATATCGCAGAGTTTTTTTTTTTTTTGGTTGATTATTGATTATTTTTCCTTCTAATTTGTCGTAATTGTTTCGTTTGGGGGTTTCAGGTTAGGAATTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTATAACCCCTAATTATGTTTGAATTTGTTGTTAATTGAATATATTTATGAAAACGGGATTTATGCATGTGAGAATTTGTTTTTAATGGATTTGGGTTCACGAGTGATAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGTCATTAAAACGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGTAGAAGAGAACGATAGATCGGTTCACCACCATAGCGATTTTTCGGACTCGCCGTCTAATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGCGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGACTCGGGTGTTCAGCGTGGGAGAATTGCGCAGAGGGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAACTTAGTTTACCAAATACAGACCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGTCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAACGTACATGGCGGCAGCCCAACATTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTAATGTACGTCTGGTCTCACTTTTTTTTTTTCTTTTCTTTTTTGTTCCTGCGTCTCTTGGGTATTATGGTAGTCTTGGGCTCTGATTTTCATAGTAATAGAAGTGGCATTCGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGAACTGTTTCGTACATGAGTGTGGTTCTTATCTTATCGTACATTTGCCAATGTAGAGGACTTATTTCGTACTTAATATGTGAATAGACGAGGTGGTATAGAAATGAATACATGGAATAATGATATAACATTTGTTTTCTCCA

mRNA sequence

GGAAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTCTCTCTCTCTCTTTCTCTCCCCCGAAGATCTTCTCTCTCCCGGAAAAAATATCCACACAAATTAGGGTTTCTTTGTGACCTTCGTTCCTTCAATTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGTCATTAAAACGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGTAGAAGAGAACGATAGATCGGTTCACCACCATAGCGATTTTTCGGACTCGCCGTCTAATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGCGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGACTCGGGTGTTCAGCGTGGGAGAATTGCGCAGAGGGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAACTTAGTTTACCAAATACAGACCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGTCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAACGTACATGGCGGCAGCCCAACATTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTAATGTACGTCTGGTCTCACTTTTTTTTTTTCTTTTCTTTTTTGTTCCTGCGTCTCTTGGGTATTATGGTAGTCTTGGGCTCTGATTTTCATAGTAATAGAAGTGGCATTCGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGAACTGTTTCGTACATGAGTGTGGTTCTTATCTTATCGTACATTTGCCAATGTAGAGGACTTATTTCGTACTTAATATGTGAATAGACGAGGTGGTATAGAAATGAATACATGGAATAATGATATAACATTTGTTTTCTCCA

Coding sequence (CDS)

ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGTCATTAAAACGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGTAGAAGAGAACGATAGATCGGTTCACCACCATAGCGATTTTTCGGACTCGCCGTCTAATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGCGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGACTCGGGTGTTCAGCGTGGGAGAATTGCGCAGAGGGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAACTTAGTTTACCAAATACAGACCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGTCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAACGTACATGGCGGCAGCCCAACATTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG

Protein sequence

MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

Homology

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BLAST of ClCG06G016630 vs. NCBI nr
Match: XP_008453149.1 (PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo])

HSP 1 Score: 666.4 bits (1718), Expect = 1.4e-187
Identity = 332/349 (95.13%), Postives = 340/349 (97.42%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+SDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD RNELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS 350
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISRS 349

[Close]

BLAST of ClCG06G016630 vs. NCBI nr
Match: KAA0057903.1 (suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 665.2 bits (1715), Expect = 3.0e-187
Identity = 331/348 (95.11%), Postives = 339/348 (97.41%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+SDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD RNELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR 349
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISR
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISR 348

[Close]

BLAST of ClCG06G016630 vs. NCBI nr
Match: TYJ98591.1 (suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186
Identity = 330/347 (95.10%), Postives = 338/347 (97.41%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+SDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD RNELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 348
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of ClCG06G016630 vs. NCBI nr
Match: XP_004138290.2 (uncharacterized protein LOC101211244 [Cucumis sativus] >KAE8652409.1 hypothetical protein Csa_013954 [Cucumis sativus])

HSP 1 Score: 662.9 bits (1709), Expect = 1.5e-186
Identity = 330/349 (94.56%), Postives = 339/349 (97.13%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTR+DD+LSS+KINMREI EENDRSVHHHSD+SDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNV+SQLDSCGD RNELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVISQLDSCGDRRNELGVGDGDSSVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLP TDRRFGCGG+ WACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPTTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS 350
           CHKRILEEDGRCPGCRKPYDRDPADNETNV  GSPT PLARSCSMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMISRS 349

[Close]

BLAST of ClCG06G016630 vs. NCBI nr
Match: XP_038878939.1 (uncharacterized protein LOC120071026 [Benincasa hispida])

HSP 1 Score: 662.9 bits (1709), Expect = 1.5e-186
Identity = 333/350 (95.14%), Postives = 339/350 (96.86%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTREDDNLSSKKINMR+I EENDRSVH HSDFSDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTREDDNLSSKKINMRDIGEENDRSVHRHSDFSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGDSRNELGVGDGDSGV RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVDRGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGC-GGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCL 300
            LSKQLSLPNTDRRFGC GGIPW CGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCL
Sbjct: 241 MLSKQLSLPNTDRRFGCGGGIPWGCGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCL 300

Query: 301 FCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS 350
           FCHKRI+EEDGRCPGCRKPYDRDPAD+ETNV GGSP F LARSCSMISRS
Sbjct: 301 FCHKRIIEEDGRCPGCRKPYDRDPADSETNVQGGSPMFALARSCSMISRS 350

[Close]

BLAST of ClCG06G016630 vs. ExPASy Swiss-Prot
Match: O95628 (CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-12
Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 271 PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 325
           P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of ClCG06G016630 vs. ExPASy Swiss-Prot
Match: Q8BT14 (CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-12
Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 271 PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 325
           P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of ClCG06G016630 vs. ExPASy Swiss-Prot
Match: P34909 (General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-10
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 274 CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD 321
           CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD
Sbjct: 33  CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD 82

[Close]

BLAST of ClCG06G016630 vs. ExPASy Swiss-Prot
Match: Q09818 (Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 274 CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD 323
           CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Sbjct: 18  CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLYTEE 67

[Close]

BLAST of ClCG06G016630 vs. ExPASy TrEMBL
Match: A0A1S3BVJ1 (uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 6.6e-188
Identity = 332/349 (95.13%), Postives = 340/349 (97.42%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+SDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD RNELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS 350
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISRS 349

[Close]

BLAST of ClCG06G016630 vs. ExPASy TrEMBL
Match: A0A5A7UPV5 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002030 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.5e-187
Identity = 331/348 (95.11%), Postives = 339/348 (97.41%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+SDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD RNELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR 349
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISR
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISR 348

[Close]

BLAST of ClCG06G016630 vs. ExPASy TrEMBL
Match: A0A5D3BIS7 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002110 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.6e-187
Identity = 330/347 (95.10%), Postives = 338/347 (97.41%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+SDSPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD RNELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 348
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of ClCG06G016630 vs. ExPASy TrEMBL
Match: A0A6J1C357 (uncharacterized protein LOC111007016 OS=Momordica charantia OX=3673 GN=LOC111007016 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.4e-176
Identity = 317/349 (90.83%), Postives = 330/349 (94.56%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSI NASISLAP+ARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEED
Sbjct: 1   MVTDSITNASISLAPSARDLPLPKKKRVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDSVVIKT +DDNLSSKKINMREI  +N  SVHH SDFS+SPSNSPPS+ SSILGGND
Sbjct: 61  NRLDSVVIKTSKDDNLSSKKINMREIGGDNGGSVHHDSDFSESPSNSPPSLASSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDKQHDQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT----EEEGDDDGLDDWEAIADALAATDKQHDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRG+ VSQLDSCGDSRNELGVGDGDS ++ GRIAQRA M+CRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRR+GCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS 350
           CHKRILEEDGRCPGCRKPY+ DPAD+ETNVHGGSPT PLARSCSMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMISRS 345

[Close]

BLAST of ClCG06G016630 vs. ExPASy TrEMBL
Match: A0A6J1JM47 (uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.1e-174
Identity = 312/349 (89.40%), Postives = 327/349 (93.70%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           NRLDS V+KT EDDNLSSKKIN REI EE+DRSVHHHSD S+SPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE DDDCL+DWEA AD L ATDKQHDQC
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEE-DDDCLEDWEAFADTLIATDKQHDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRG+VVSQL SCGDSRNELGVGDGDS ++ GRIA+RASMN RAWRPDDA RPQSLP
Sbjct: 181 SESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCG +PWACGGV+ VPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS 350
           CHKRILEEDGRCPGCRKPYDRDPADNETN H GSPTFPLARSCSMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348

[Close]

BLAST of ClCG06G016630 vs. TAIR 10
Match: AT5G62910.1 (RING/U-box superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 3.7e-66
Identity = 165/358 (46.09%), Postives = 218/358 (60.89%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           M+TDSI NAS + AP  RD    KK+  +++K+KQ+KL +RREQWLS+ AV NK+  EE 
Sbjct: 1   MITDSITNASATSAP--RDSG-KKKRNNKSAKMKQNKLGLRREQWLSQVAVSNKEVKEER 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGND 120
           +     V ++++  + SS K+  RE       ++ HH  F +SPSNS        +GG  
Sbjct: 61  S-----VNRSQKPHHESSDKVR-REEDNNGGNNLLHHESFMESPSNSS-------VGGTY 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----- 180
           S  +F+G SS SS  SSSSG  SG+ITEEE  ++ DD C+DDWEA+ADALAA ++     
Sbjct: 121 SSTNFSGRSSRSS--SSSSGFCSGNITEEENVDDDDDGCVDDWEAVADALAAEEEIEKKS 180

Query: 181 -----QHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRP 240
                  +Q S      NV     S  D+ + +GV D     +  R++ R   + RAWR 
Sbjct: 181 RPLESVKEQVSVGQSASNVCD--SSISDASDVVGVEDPKQ--ECLRVSSRKQTSNRAWRL 240

Query: 241 DDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLP 300
           DD  RPQ LP L+KQLS P  D+RF            +++P+SCPIC+EDLDLTDS+FLP
Sbjct: 241 DDDLRPQGLPNLAKQLSFPELDKRFSS----------VAIPSSCPICYEDLDLTDSNFLP 300

Query: 301 CFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR 349
           C CGFRLCLFCHK I + DGRCPGCRKPY+R+    ET++ GG  T  LARS SM  +
Sbjct: 301 CPCGFRLCLFCHKTICDGDGRCPGCRKPYERNMVKAETSIQGGGLTIRLARSSSMFCK 326

[Close]

BLAST of ClCG06G016630 vs. TAIR 10
Match: AT3G48070.1 (RING/U-box superfamily protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-65
Identity = 166/360 (46.11%), Postives = 215/360 (59.72%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEE- 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREI------VEENDRSVHHHSDFSDSPSNSPPSIGSS 120
                       +  + S+K + R++      ++E++   H H  F +S SNSP    +S
Sbjct: 61  ---------MESNRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP----NS 120

Query: 121 ILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATD 180
           IL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D
Sbjct: 121 ILSGMNSIPNFSSSSS-----SGSGGSCSGNITEEEDAD--DDGCLDDWEAIADALAADD 180

Query: 181 KQHDQCSESSPRGNVVSQLDSC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWR 240
           ++H++  E+ P        +SC    D +    +G  D  ++  +    +R   + +AWR
Sbjct: 181 EKHEK--ENPP--------ESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWR 240

Query: 241 PDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL 300
           PDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Sbjct: 241 PDDKLRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFL 300

Query: 301 PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS 350
           PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM  RS
Sbjct: 301 PCPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRS 319

[Close]

BLAST of ClCG06G016630 vs. TAIR 10
Match: AT3G48070.2 (RING/U-box superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 3.1e-65
Identity = 165/359 (45.96%), Postives = 214/359 (59.61%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60
           M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEE- 60

Query: 61  NRLDSVVIKTREDDNLSSKKINMREI------VEENDRSVHHHSDFSDSPSNSPPSIGSS 120
                       +  + S+K + R++      ++E++   H H  F +S SNSP    +S
Sbjct: 61  ---------MESNRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP----NS 120

Query: 121 ILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATD 180
           IL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D
Sbjct: 121 ILSGMNSIPNFSSSSS-----SGSGGSCSGNITEEEDAD--DDGCLDDWEAIADALAADD 180

Query: 181 KQHDQCSESSPRGNVVSQLDSC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWR 240
           ++H++  E+ P        +SC    D +    +G  D  ++  +    +R   + +AWR
Sbjct: 181 EKHEK--ENPP--------ESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWR 240

Query: 241 PDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL 300
           PDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Sbjct: 241 PDDKLRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFL 300

Query: 301 PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR 349
           PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM  R
Sbjct: 301 PCPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCR 318

[Close]

BLAST of ClCG06G016630 vs. TAIR 10
Match: AT1G74870.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 6.0e-16
Identity = 85/299 (28.43%), Postives = 128/299 (42.81%), Query Frame = 0


Query: 25  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKIN 84
           KKR  N   KLKQ K+D RR+QW+S+    N    E   RL S++ K  +     + +I+
Sbjct: 21  KKRKANWFCKLKQWKIDARRKQWISQWKKANVDEEEIGRRLRSLLEKLTDQ---KAWRID 80

Query: 85  MREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCR 144
             +  E+++  +   S F+ SP        +S+L   DS              S    C 
Sbjct: 81  YDD-DEDDEIDLERTSSFASSP--------TSVLKRKDS-------------VSGDCFCC 140

Query: 145 SGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNE 204
           S  +TEEEEE    DD  D+W+   DAL + +  +++ S          + D   D+   
Sbjct: 141 SKQMTEEEEEV--FDDAYDNWDGFKDALNSFENDNNESSRLVTEDFEQEEEDLIPDTSQR 200

Query: 205 LGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPW 264
           +            +  Q A+               ++   S +    N++++ G G    
Sbjct: 201 M-----------NKCKQEAAPG----------NQTTIHRNSNKKKRSNSEKQRGDG---- 259

Query: 265 ACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR 322
                      CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y +
Sbjct: 261 --------DEECPICSELMDATDLEFEPCTCGFRICLFCHNKISENEARCPACRKDYKK 259

[Close]

BLAST of ClCG06G016630 vs. TAIR 10
Match: AT3G45630.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-11
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 273 SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD 323
           +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Sbjct: 8   TCPLCAEEMDLTDQQLKPCKCGYQICVWCWHHIMDMAEKDQSEGRCPACRTPYDKE 63

The following BLAST results are available for this feature:

BLAST of ClCG06G016630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453149.1	1.4e-187	95.13	PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]	[more]
KAA0057903.1	3.0e-187	95.11	suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]	[more]
TYJ98591.1	1.2e-186	95.10	suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_004138290.2	1.5e-186	94.56	uncharacterized protein LOC101211244 [Cucumis sativus] >KAE8652409.1 hypothetica...	[more]
XP_038878939.1	1.5e-186	95.14	uncharacterized protein LOC120071026 [Benincasa hispida]	[more]

BLAST of ClCG06G016630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O95628	1.8e-12	52.73	CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 S...	[more]
Q8BT14	1.8e-12	52.73	CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 ...	[more]
P34909	3.7e-10	50.00	General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisia...	[more]
Q09818	1.4e-09	48.00	Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharo...	[more]

BLAST of ClCG06G016630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BVJ1	6.6e-188	95.13	uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=...	[more]
A0A5A7UPV5	1.5e-187	95.11	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BIS7	5.6e-187	95.10	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1C357	4.4e-176	90.83	uncharacterized protein LOC111007016 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1JM47	7.1e-174	89.40	uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637...	[more]

BLAST of ClCG06G016630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62910.1	3.7e-66	46.09	RING/U-box superfamily protein	[more]
AT3G48070.1	1.1e-65	46.11	RING/U-box superfamily protein	[more]
AT3G48070.2	3.1e-65	45.96	RING/U-box superfamily protein	[more]
AT1G74870.1	6.0e-16	28.43	RING/U-box superfamily protein	[more]
AT3G45630.1	3.4e-11	42.86	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14570	zf-RING_4	coord: 274..320 e-value: 2.2E-18 score: 65.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..193
None	No IPR available	PANTHER	PTHR12603:SF7	RING/U-BOX SUPERFAMILY PROTEIN	coord: 8..347
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 272..324
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 269..331 e-value: 2.1E-18 score: 67.4
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 8..347
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 274..316 score: 9.169853
IPR039515	NOT4, modified RING finger, HC subclass (C4C4-type)	CDD	cd16618	mRING-HC-C4C4_CNOT4	coord: 274..317 e-value: 5.79434E-18 score: 74.5732

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G016630.1	ClCG06G016630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity