ClCG06G016090 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG06G016090
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPentatricopeptide repeat-containing protein
LocationCG_Chr06: 29385777 .. 29387297 (+)
RNA-Seq ExpressionClCG06G016090
SyntenyClCG06G016090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTTGTTAACAGCAGAAAATCGAACGTGGCACTCTCTCTGTGCTCCCAAGTTAAGATTAAATTTCCAAATTTTCAATTGCTCATCCCCAAGTTCATTTGGAGTTCAGATCGAAAAACAGCCACTGATACAATACCCAATGGTAGTTATTTTGCCAAGGAACAAAGATTTTTGTCTCTTTTCAAGCAATGTTCCACTGTGAAAGACTTGAATCAAGTCCATGCCCGTATTATCCAGTTGGGTTTCGATCAGAATCTCTTCGTTATTGGCAAACTCATTGAGTTTTGTGCGGTTTGGGACCATGGCGACATGAATTACGCTGTTGTTGTTTTTAACAGAATCGAAAACCCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAATTAGTAAACTGCCGAAGGCGTTTGAGTTATACAAGAGAATGCTAGAGAAGGGAATAGCAGCAAACAATTTTACTTTTTCTTTCTTGCTGAAGATTTCTGGGCAATTGGGTTCAATTATGTTGGGAAAGCAGTTACATGTTAATATTCTGAAACTTGGCCTTGATTCCCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAATACGTCAAAATAGCACGCAACCTGTTTGATGAAATGCCCAAACCAGATTTGGTGGCTTGGAATACTGTAATTGACTGTCATGTCTCTTGTGGGATGTACAACGAAGCACTGGGCTTGTTTCTTCAAATGTTGCAGAGTGGCGTAGAGCCTGATGAAGCCACACTGGTTGTGACGGTCTCAGCATGTTCTGCACTGGGTGCACTGGACTTTGGGAGGTGGGTTCATTCCTATGTGAAGTGTAACGATAGAGGAAAGACTATTGCTGTTTTCAATTCATTGATCGACATGTACGCCAAGTGTGGAGCGGTTGAAGACGCCCGCGAGATGTTTAACACAATAAGTGGCAAGAACATAGTAACATGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCGCTGACACTATTCTCAAACATGTTAGCGGAGAAGGTCGAGACTCCTGATGGTGTGACTTTCTTGGGAGTATTGTGTGCTTGTAACCATGGAGGAAAAGTGGAGGAAGGGAGAAAGTATTTTGATCTAATGACCAAACACTTCAATATCCAACCCACACTAAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTGATAAGGAGCATGCCAATGGAGTGCAATGCTGTTATATGGAGAACATTACTCGCAACCTGTCGGATGCATGGAAACGTTAAACTCGGGGAGAGAGTAAGGAGCCATGTTTTGGAGATAGAGCCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTATGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGAAAATCAATGCAACGGAAAGGAGTGCAGAAACCAGAGCCTGGTAATAGTTTTTTGGAAATTAATCCATTGTAA

mRNA sequence

ATGATCGTTGTTAACAGCAGAAAATCGAACGTGGCACTCTCTCTGTGCTCCCAAGTTAAGATTAAATTTCCAAATTTTCAATTGCTCATCCCCAAGTTCATTTGGAGTTCAGATCGAAAAACAGCCACTGATACAATACCCAATGGTAGTTATTTTGCCAAGGAACAAAGATTTTTGTCTCTTTTCAAGCAATGTTCCACTGTGAAAGACTTGAATCAAGTCCATGCCCGTATTATCCAGTTGGGTTTCGATCAGAATCTCTTCGTTATTGGCAAACTCATTGAGTTTTGTGCGGTTTGGGACCATGGCGACATGAATTACGCTGTTGTTGTTTTTAACAGAATCGAAAACCCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAATTAGTAAACTGCCGAAGGCGTTTGAGTTATACAAGAGAATGCTAGAGAAGGGAATAGCAGCAAACAATTTTACTTTTTCTTTCTTGCTGAAGATTTCTGGGCAATTGGGTTCAATTATGTTGGGAAAGCAGTTACATGTTAATATTCTGAAACTTGGCCTTGATTCCCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAATACGTCAAAATAGCACGCAACCTGTTTGATGAAATGCCCAAACCAGATTTGGTGGCTTGGAATACTGTAATTGACTGTCATGTCTCTTGTGGGATGTACAACGAAGCACTGGGCTTGTTTCTTCAAATGTTGCAGAGTGGCGTAGAGCCTGATGAAGCCACACTGGTTGTGACGGTCTCAGCATGTTCTGCACTGGGTGCACTGGACTTTGGGAGGTGGGTTCATTCCTATGTGAAGTGTAACGATAGAGGAAAGACTATTGCTGTTTTCAATTCATTGATCGACATGTACGCCAAGTGTGGAGCGGTTGAAGACGCCCGCGAGATGTTTAACACAATAAGTGGCAAGAACATAGTAACATGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCGCTGACACTATTCTCAAACATGTTAGCGGAGAAGGTCGAGACTCCTGATGGTGTGACTTTCTTGGGAGTATTGTGTGCTTGTAACCATGGAGGAAAAGTGGAGGAAGGGAGAAAGTATTTTGATCTAATGACCAAACACTTCAATATCCAACCCACACTAAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTGATAAGGAGCATGCCAATGGAGTGCAATGCTGTTATATGGAGAACATTACTCGCAACCTGTCGGATGCATGGAAACGTTAAACTCGGGGAGAGAGTAAGGAGCCATGTTTTGGAGATAGAGCCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTATGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGAAAATCAATGCAACGGAAAGGAGTGCAGAAACCAGAGCCTGGTAATAGTTTTTTGGAAATTAATCCATTGTAA

Coding sequence (CDS)

ATGATCGTTGTTAACAGCAGAAAATCGAACGTGGCACTCTCTCTGTGCTCCCAAGTTAAGATTAAATTTCCAAATTTTCAATTGCTCATCCCCAAGTTCATTTGGAGTTCAGATCGAAAAACAGCCACTGATACAATACCCAATGGTAGTTATTTTGCCAAGGAACAAAGATTTTTGTCTCTTTTCAAGCAATGTTCCACTGTGAAAGACTTGAATCAAGTCCATGCCCGTATTATCCAGTTGGGTTTCGATCAGAATCTCTTCGTTATTGGCAAACTCATTGAGTTTTGTGCGGTTTGGGACCATGGCGACATGAATTACGCTGTTGTTGTTTTTAACAGAATCGAAAACCCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAATTAGTAAACTGCCGAAGGCGTTTGAGTTATACAAGAGAATGCTAGAGAAGGGAATAGCAGCAAACAATTTTACTTTTTCTTTCTTGCTGAAGATTTCTGGGCAATTGGGTTCAATTATGTTGGGAAAGCAGTTACATGTTAATATTCTGAAACTTGGCCTTGATTCCCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAATACGTCAAAATAGCACGCAACCTGTTTGATGAAATGCCCAAACCAGATTTGGTGGCTTGGAATACTGTAATTGACTGTCATGTCTCTTGTGGGATGTACAACGAAGCACTGGGCTTGTTTCTTCAAATGTTGCAGAGTGGCGTAGAGCCTGATGAAGCCACACTGGTTGTGACGGTCTCAGCATGTTCTGCACTGGGTGCACTGGACTTTGGGAGGTGGGTTCATTCCTATGTGAAGTGTAACGATAGAGGAAAGACTATTGCTGTTTTCAATTCATTGATCGACATGTACGCCAAGTGTGGAGCGGTTGAAGACGCCCGCGAGATGTTTAACACAATAAGTGGCAAGAACATAGTAACATGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCGCTGACACTATTCTCAAACATGTTAGCGGAGAAGGTCGAGACTCCTGATGGTGTGACTTTCTTGGGAGTATTGTGTGCTTGTAACCATGGAGGAAAAGTGGAGGAAGGGAGAAAGTATTTTGATCTAATGACCAAACACTTCAATATCCAACCCACACTAAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTGATAAGGAGCATGCCAATGGAGTGCAATGCTGTTATATGGAGAACATTACTCGCAACCTGTCGGATGCATGGAAACGTTAAACTCGGGGAGAGAGTAAGGAGCCATGTTTTGGAGATAGAGCCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTATGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGAAAATCAATGCAACGGAAAGGAGTGCAGAAACCAGAGCCTGGTAATAGTTTTTTGGAAATTAATCCATTGTAA

Protein sequence

MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLSLFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDGFLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEALGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVTFLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMIKTRKSMQRKGVQKPEPGNSFLEINPL
Homology
BLAST of ClCG06G016090 vs. NCBI nr
Match: XP_038880037.1 (pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida])

HSP 1 Score: 960.7 bits (2482), Expect = 5.1e-276
Identity = 468/506 (92.49%), Postives = 488/506 (96.44%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MIV+ SRK+N+ALSL SQVK KFP+FQLL+PKF+WSSDRKTATDTIPNGSYFAKEQRFLS
Sbjct: 1   MIVITSRKANLALSLFSQVKFKFPHFQLLVPKFVWSSDRKTATDTIPNGSYFAKEQRFLS 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           L KQCSTVKDLNQ+HARIIQLGFDQNLFVIGKLIEFCAV ++GDMNYAVVVFN IENPDG
Sbjct: 61  LSKQCSTVKDLNQLHARIIQLGFDQNLFVIGKLIEFCAVSNYGDMNYAVVVFNGIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRISKL KAFE YKRMLEKGIAA+NFTFSFLLKISGQ GSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISKLLKAFEFYKRMLEKGIAADNFTFSFLLKISGQSGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILK+GLDSHVYVRNTLIHMYGRLK VKIARNLFDEMPKPDLVAWN VIDCHVSCGMY+EA
Sbjct: 181 ILKVGLDSHVYVRNTLIHMYGRLKDVKIARNLFDEMPKPDLVAWNAVIDCHVSCGMYSEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHS+VK ND+GKTIAV NSLIDM
Sbjct: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKRNDKGKTIAVLNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVEDAREMFN +S KN+VTWNTMIMGLATHGDAEDALTLFSNMLA+KVETPDGVT
Sbjct: 301 YAKCGAVEDAREMFNAMSDKNVVTWNTMIMGLATHGDAEDALTLFSNMLAKKVETPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FLGVLCACNHGGKVEEGR+YF LMTKHFNIQPT+KHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGREYFHLMTKHFNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA CRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINPL 507
           KTRKSMQRKGVQKPEPGNS+LEIN L
Sbjct: 481 KTRKSMQRKGVQKPEPGNSYLEINQL 506

BLAST of ClCG06G016090 vs. NCBI nr
Match: XP_022987183.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima] >XP_022987184.1 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 951.4 bits (2458), Expect = 3.1e-273
Identity = 461/505 (91.29%), Postives = 480/505 (95.05%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MIV+N  KSN+ALSLCS+V+IKFP+FQLL+PK+IWSSD KT TDTIPNGSYF+KEQRFLS
Sbjct: 1   MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCS VKDLNQ+HAR IQ GFDQNLFV+GKLIEFCAV  HGDMNYAV VFNRIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRIS LPKAFE YKRMLEKGIAA+NFTFSFLLKISGQLGSIML KQLH N
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLK VK+ARNLFDEMPKP LVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHS+VK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVEDAREMFN  SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAEK+ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FLGVLCACNHGGKVEEGR+YFDLMTKH +IQPT+KHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA CRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINP 506
           K RKSMQRKGVQKPEPGNSFLEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

BLAST of ClCG06G016090 vs. NCBI nr
Match: XP_023516362.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 951.0 bits (2457), Expect = 4.0e-273
Identity = 461/505 (91.29%), Postives = 480/505 (95.05%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MIV+N  KSN+A SLCS+V+IKFP+FQLL+PKFIWSSDRKT T+ IPNGSYF+KEQRFLS
Sbjct: 1   MIVLNGGKSNLARSLCSRVEIKFPHFQLLLPKFIWSSDRKTPTEAIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCS VKDLNQVHAR I+ GFDQNLFV+GKLIEFCAV  HGDMNYAV VFNRIENPDG
Sbjct: 61  LFKQCSAVKDLNQVHARTIRSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRIS LPKAFE YKRMLEKGIAA+NFTFSFLLKISGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYG LK VK+ARNLFDEMPKP LVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGSLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHS+VK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVE+AREMFN  SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAEK+ TPDGVT
Sbjct: 301 YAKCGAVEEAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FLGVLCACNHGGKVEEGR+YFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA CRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINP 506
           K RKSMQRKGVQKPEPGNSFLEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

BLAST of ClCG06G016090 vs. NCBI nr
Match: KAG6589516.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 950.7 bits (2456), Expect = 5.2e-273
Identity = 462/505 (91.49%), Postives = 479/505 (94.85%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MIV+N  KSN+A SL S+V+IKFP+FQLL+PKFIWSSDRKT TD IPNG YF+KEQRFLS
Sbjct: 1   MIVLNGGKSNLARSLFSRVQIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCS VKDLNQ+HARIIQ GFDQNLFV+GKLIEFCAV  HGDMNYAV VFNRIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRIS LPKAFE YKRMLEKGIAA+NFTFSFLLKI GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLK VK+ARNLFDEMPKP LVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHS+VK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVEDAREMFN  SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAEK+ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FLGVLCACNHGGKVEEGR+YFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA CRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINP 506
           K RKSMQRKGVQKPEPGNSFLEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

BLAST of ClCG06G016090 vs. NCBI nr
Match: KAG7023204.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 950.7 bits (2456), Expect = 5.2e-273
Identity = 462/505 (91.49%), Postives = 479/505 (94.85%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MIV+N  KSN+A SL S+V+IKFP+FQLL+PKFIWSSDRKT TD IPNG YF+KEQRFLS
Sbjct: 1   MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCS VKDLNQ+HARIIQ GFDQNLFV+GKLIEFCAV  HGDMNYAV VFNRIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRIS LPKAFE YKRMLEKGIAA+NFTFSFLLKI GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLK VK+ARNLFDEMPKP LVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHS+VK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVEDAREMFN  SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAEK+ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FLGVLCACNHGGKVEEGR+YFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA CRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINP 506
           K RKSMQRKGVQKPEPGNSFLEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

BLAST of ClCG06G016090 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 371.3 bits (952), Expect = 1.7e-101
Identity = 193/466 (41.42%), Postives = 295/466 (63.30%), Query Frame = 0

Query: 56  QRFLSLFKQCSTVKDLNQVHARIIQLGFDQ---NLFVIGKLIEFCAVWDHGDMNYAVVVF 115
           QR  SL + CS +  L Q+HA  ++  + +    LF+ GK+++  +     D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSS--SFSDVNYAFRVF 108

Query: 116 NRIENPDGFLWNTMIRGFGR-ISKLPKAFELYKRMLEKGIAA-NNFTFSFLLKISGQLGS 175
           + IEN   F+WNT+IR     +S+  +AF LY++MLE+G ++ +  TF F+LK    +  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 176 IMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDC 235
              GKQ+H  I+K G    VYV N LIH+YG    + +AR +FDEMP+  LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 236 HVSCGMYNEALGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYV--KCN-DR 295
            V  G Y+ AL LF +M Q   EPD  T+   +SAC+ LG+L  G W H+++  KC+ D 
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 296 GKTIAVFNSLIDMYAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSN 355
              + V NSLI+MY KCG++  A ++F  +  +++ +WN MI+G ATHG AE+A+  F  
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 356 MLAEKVET-PDGVTFLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGR 415
           M+ ++    P+ VTF+G+L ACNH G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 416 AGFVEEAYQLIRSMPMECNAVIWRTLL-ATCRMHGNVKLGERVRSHVLEIEPDHSSD--- 475
           AG++ EA  ++ SMPM+ +AVIWR+LL A C+   +V+L E +  +++  + D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 476 ----YVLLANMYASSGQWNEMIKTRKSMQRKGVQKPEPGNSFLEIN 505
               YVLL+ +YAS+ +WN++   RK M   G++K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

BLAST of ClCG06G016090 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 361.3 bits (926), Expect = 1.8e-98
Identity = 183/442 (41.40%), Postives = 282/442 (63.80%), Query Frame = 0

Query: 66  STVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVW--DHGDMNYAVVVFNRIENP-DGFL 125
           S++  L Q+HA  I+ G   +   +GK + F  V       M+YA  VF++IE P + F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 126 WNTMIRGFGRISKLPKAFELYKRMLEKG-IAANNFTFSFLLKISGQLGSIMLGKQLHVNI 185
           WNT+IRG+  I     AF LY+ M   G +  +  T+ FL+K    +  + LG+ +H  +
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 186 LKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEAL 245
           ++ G  S +YV+N+L+H+Y     V  A  +FD+MP+ DLVAWN+VI+     G   EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 246 GLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDMY 305
            L+ +M   G++PD  T+V  +SAC+ +GAL  G+ VH Y+      + +   N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 306 AKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVTF 365
           A+CG VE+A+ +F+ +  KN V+W ++I+GLA +G  ++A+ LF  M + +   P  +TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 366 LGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSMP 425
           +G+L AC+H G V+EG +YF  M + + I+P ++H+G MVD+L RAG V++AY+ I+SMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 426 MECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMIK 485
           M+ N VIWRTLL  C +HG+  L E  R  +L++EP+HS DYVLL+NMYAS  +W+++ K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 486 TRKSMQRKGVQKPEPGNSFLEI 504
            RK M R GV+K  PG+S +E+
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468

BLAST of ClCG06G016090 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 355.1 bits (910), Expect = 1.3e-96
Identity = 183/451 (40.58%), Postives = 277/451 (61.42%), Query Frame = 0

Query: 56  QRFLSLFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVW-DHGDMNYAVVVFNR 115
           Q  + L  +C+++++L Q+ A  I+   +   FV  KLI FC        M+YA  +F  
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 89

Query: 116 IENPDGFLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLG 175
           +  PD  ++N+M RG+ R +   + F L+  +LE GI  +N+TF  LLK      ++  G
Sbjct: 90  MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 149

Query: 176 KQLHVNILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSC 235
           +QLH   +KLGLD +VYV  TLI+MY   + V  AR +FD + +P +V +N +I  +   
Sbjct: 150 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 209

Query: 236 GMYNEALGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVF 295
              NEAL LF +M    ++P+E TL+  +S+C+ LG+LD G+W+H Y K +   K + V 
Sbjct: 210 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 269

Query: 296 NSLIDMYAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVE 355
            +LIDM+AKCG+++DA  +F  +  K+   W+ MI+  A HG AE ++ +F  M +E V+
Sbjct: 270 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 329

Query: 356 TPDGVTFLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAY 415
            PD +TFLG+L AC+H G+VEEGRKYF  M   F I P++KHYGSMVD+L RAG +E+AY
Sbjct: 330 -PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 389

Query: 416 QLIRSMPMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSG 475
           + I  +P+    ++WR LLA C  H N+ L E+V   + E++  H  DYV+L+N+YA + 
Sbjct: 390 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 449

Query: 476 QWNEMIKTRKSMQ-RKGVQKPEPGNSFLEIN 505
           +W  +   RK M+ RK V+   PG S +E+N
Sbjct: 450 KWEYVDSLRKVMKDRKAVK--VPGCSSIEVN 476

BLAST of ClCG06G016090 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 4.1e-95
Identity = 170/482 (35.27%), Postives = 287/482 (59.54%), Query Frame = 0

Query: 55  EQRFLSLFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNR 114
           E  F+   ++  +  +  +++A II  G  Q+ F++ K+++FC   +  DM+YA  +FN+
Sbjct: 10  ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69

Query: 115 IENPDGFLWNTMIRGFGRISKLPKAFELYKRMLEKGI-AANNFTFSFLLKISGQLGSIML 174
           + NP+ FL+N++IR +   S       +YK++L K     + FTF F+ K    LGS  L
Sbjct: 70  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129

Query: 175 GKQLHVNILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNT------- 234
           GKQ+H ++ K G   HV   N LI MY +   +  A  +FDEM + D+++WN+       
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189

Query: 235 ------------------------VIDCHVSCGMYNEALGLFLQMLQSGVEPDEATLVVT 294
                                   +I  +   G Y EA+  F +M  +G+EPDE +L+  
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249

Query: 295 VSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNTISGKNI 354
           + +C+ LG+L+ G+W+H Y +     K   V N+LI+MY+KCG +  A ++F  + GK++
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309

Query: 355 VTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVTFLGVLCACNHGGKVEEGRKYFD 414
           ++W+TMI G A HG+A  A+  F+ M   KV+ P+G+TFLG+L AC+H G  +EG +YFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369

Query: 415 LMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLATCRMHGNV 474
           +M + + I+P ++HYG ++D+L RAG +E A ++ ++MPM+ ++ IW +LL++CR  GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429

Query: 475 KLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMIKTRKSMQRKGVQKPEPGNSFLE 505
            +      H++E+EP+   +YVLLAN+YA  G+W ++ + RK ++ + ++K  PG S +E
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487

BLAST of ClCG06G016090 vs. ExPASy Swiss-Prot
Match: Q9C6T2 (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.0e-94
Identity = 181/487 (37.17%), Postives = 293/487 (60.16%), Query Frame = 0

Query: 21  IKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLSLFKQCSTVKDLNQVHARIIQ 80
           IK P  Q L+      + R   T      ++  KEQ  L L K+C  + +  QVHAR I+
Sbjct: 2   IKAPILQSLL------ASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIK 61

Query: 81  LG-FDQNLFVIGKLIEFCA--VWDHGDMNYAVVVFNRIENPDGFLWNTMIRGFGRISKLP 140
           L  F  + F    ++  CA   W++  MNYA  +F  I++P  F +NTMIRG+  +    
Sbjct: 62  LSLFYSSSFSASSVLAKCAHSGWEN-SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFE 121

Query: 141 KAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLI 200
           +A   Y  M+++G   +NFT+  LLK   +L SI  GKQ+H  + KLGL++ V+V+N+LI
Sbjct: 122 EALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLI 181

Query: 201 HMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEALGLFLQML-QSGVEPDE 260
           +MYGR   ++++  +F+++      +W++++      GM++E L LF  M  ++ ++ +E
Sbjct: 182 NMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEE 241

Query: 261 ATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNT 320
           + +V  + AC+  GAL+ G  +H ++  N     I V  SL+DMY KCG ++ A  +F  
Sbjct: 242 SGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK 301

Query: 321 ISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVTFLGVLCACNHGGKVEE 380
           +  +N +T++ MI GLA HG+ E AL +FS M+ E +E PD V ++ VL AC+H G V+E
Sbjct: 302 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE-PDHVVYVSVLNACSHSGLVKE 361

Query: 381 GRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLATC 440
           GR+ F  M K   ++PT +HYG +VD+LGRAG +EEA + I+S+P+E N VIWRT L+ C
Sbjct: 362 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 421

Query: 441 RMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMIKTRKSMQRKGVQKPEP 500
           R+  N++LG+     +L++   +  DY+L++N+Y+    W+++ +TR  +  KG+ K  P
Sbjct: 422 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGL-KQTP 479

Query: 501 GNSFLEI 504
           G S +E+
Sbjct: 482 GFSIVEL 479

BLAST of ClCG06G016090 vs. ExPASy TrEMBL
Match: A0A6J1JI60 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484809 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 1.5e-273
Identity = 461/505 (91.29%), Postives = 480/505 (95.05%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MIV+N  KSN+ALSLCS+V+IKFP+FQLL+PK+IWSSD KT TDTIPNGSYF+KEQRFLS
Sbjct: 1   MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCS VKDLNQ+HAR IQ GFDQNLFV+GKLIEFCAV  HGDMNYAV VFNRIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRIS LPKAFE YKRMLEKGIAA+NFTFSFLLKISGQLGSIML KQLH N
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLK VK+ARNLFDEMPKP LVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHS+VK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVEDAREMFN  SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAEK+ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FLGVLCACNHGGKVEEGR+YFDLMTKH +IQPT+KHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA CRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINP 506
           K RKSMQRKGVQKPEPGNSFLEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

BLAST of ClCG06G016090 vs. ExPASy TrEMBL
Match: A0A6J1E6Y6 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111429989 PE=4 SV=1)

HSP 1 Score: 945.7 bits (2443), Expect = 8.2e-272
Identity = 460/505 (91.09%), Postives = 477/505 (94.46%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MIV+N  KSN+A SL S+V+IKFP+FQLL+PKFIWSSDRKT TD IPNG YF+KEQRFLS
Sbjct: 1   MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCS VKDLNQ+HARIIQ GFDQNLFV+GKLIEFCAV  HGDMNYAV VFNRIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRIS LPKAFE YKRMLEKGIAA+NFTFSFLLKI GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYG LK VK+ARNLFDEMPKP LVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGGLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHS+VK ND GKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDSGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVEDAREMFN  SGKNIVTWNTMIMGLATHGD EDALTLFSNMLAEK+ TPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FLGVLCACNHGGKVEEGR+YFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA CRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINP 506
           K RKSMQRKGVQKPEPGNSFLEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

BLAST of ClCG06G016090 vs. ExPASy TrEMBL
Match: A0A5A7UQ05 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002560 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 2.8e-264
Identity = 444/506 (87.75%), Postives = 471/506 (93.08%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MI++N RK N+ALSLCS  KIKF  FQL++P+FIW+S  KTATDTIPNG YFAKEQ  + 
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCST+K LNQ+HARII+LGFDQNLFVIGKLI+FCAV DHGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRI KL  AFE YKRMLEKGI A+NFTFSFLLKI+GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLK V IARNLFDE+PK DLVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRW+HS+V  NDRGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAV+ AREMFN +SGKN+VTWNTMIMGLATHGDAEDALTLFSNML EKVETPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FL VLCACNHGGKVEEGR+YFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA C+MHGNVKLGERV SHVLEIEPDHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINPL 507
           KTRKSMQ+KGV+KPEPGNS+LEINPL
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINPL 506

BLAST of ClCG06G016090 vs. ExPASy TrEMBL
Match: A0A1S3BWU9 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494002 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 2.8e-264
Identity = 444/506 (87.75%), Postives = 471/506 (93.08%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MI++N RK N+ALSLCS  KIKF  FQL++P+FIW+S  KTATDTIPNG YFAKEQ  + 
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCST+K LNQ+HARII+LGFDQNLFVIGKLI+FCAV DHGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGRI KL  AFE YKRMLEKGI A+NFTFSFLLKI+GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLK V IARNLFDE+PK DLVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRW+HS+V  NDRGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAV+ AREMFN +SGKN+VTWNTMIMGLATHGDAEDALTLFSNML EKVETPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FL VLCACNHGGKVEEGR+YFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA C+MHGNVKLGERV SHVLEIEPDHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINPL 507
           KTRKSMQ+KGV+KPEPGNS+LEINPL
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINPL 506

BLAST of ClCG06G016090 vs. ExPASy TrEMBL
Match: A0A0A0LUI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009850 PE=4 SV=1)

HSP 1 Score: 919.5 bits (2375), Expect = 6.3e-264
Identity = 445/506 (87.94%), Postives = 473/506 (93.48%), Query Frame = 0

Query: 1   MIVVNSRKSNVALSLCSQVKIKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLS 60
           MI++N RK N+ALSLCS VKI F NFQLL+P+FIWSS  KTATDTIPNG YFAKEQ+F+ 
Sbjct: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60

Query: 61  LFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNRIENPDG 120
           LFKQCST+KDLNQ+HA II+LGFDQNLFVIGKLI+FCAV DHGDMNYAVVVF+RIEN DG
Sbjct: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120

Query: 121 FLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVN 180
           FLWNTMIRGFGR  KL  AFE YKRMLEKGIAA+NFTFSFLLK++GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180

Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEA 240
           ILKLGLDSHVYVRNTLIHMYGRLK V IARNLFDE+PK DLVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHS+V  NDRGKTIAVFNSLIDM
Sbjct: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVT 360
           YAKCGAVE AREMFN +SGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAE+VETPDGVT
Sbjct: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSM 420
           FL VLCACN+GGKVEEGR+YFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLA C+MHGNV+LGERV SHVLEI  DHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMQRKGVQKPEPGNSFLEINPL 507
           KTRKSM RKGV+KPEPGNS+LEINPL
Sbjct: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 506

BLAST of ClCG06G016090 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 371.3 bits (952), Expect = 1.2e-102
Identity = 193/466 (41.42%), Postives = 295/466 (63.30%), Query Frame = 0

Query: 56  QRFLSLFKQCSTVKDLNQVHARIIQLGFDQ---NLFVIGKLIEFCAVWDHGDMNYAVVVF 115
           QR  SL + CS +  L Q+HA  ++  + +    LF+ GK+++  +     D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSS--SFSDVNYAFRVF 108

Query: 116 NRIENPDGFLWNTMIRGFGR-ISKLPKAFELYKRMLEKGIAA-NNFTFSFLLKISGQLGS 175
           + IEN   F+WNT+IR     +S+  +AF LY++MLE+G ++ +  TF F+LK    +  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 176 IMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDC 235
              GKQ+H  I+K G    VYV N LIH+YG    + +AR +FDEMP+  LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 236 HVSCGMYNEALGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYV--KCN-DR 295
            V  G Y+ AL LF +M Q   EPD  T+   +SAC+ LG+L  G W H+++  KC+ D 
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 296 GKTIAVFNSLIDMYAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSN 355
              + V NSLI+MY KCG++  A ++F  +  +++ +WN MI+G ATHG AE+A+  F  
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 356 MLAEKVET-PDGVTFLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGR 415
           M+ ++    P+ VTF+G+L ACNH G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 416 AGFVEEAYQLIRSMPMECNAVIWRTLL-ATCRMHGNVKLGERVRSHVLEIEPDHSSD--- 475
           AG++ EA  ++ SMPM+ +AVIWR+LL A C+   +V+L E +  +++  + D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 476 ----YVLLANMYASSGQWNEMIKTRKSMQRKGVQKPEPGNSFLEIN 505
               YVLL+ +YAS+ +WN++   RK M   G++K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

BLAST of ClCG06G016090 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-99
Identity = 183/442 (41.40%), Postives = 282/442 (63.80%), Query Frame = 0

Query: 66  STVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVW--DHGDMNYAVVVFNRIENP-DGFL 125
           S++  L Q+HA  I+ G   +   +GK + F  V       M+YA  VF++IE P + F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 126 WNTMIRGFGRISKLPKAFELYKRMLEKG-IAANNFTFSFLLKISGQLGSIMLGKQLHVNI 185
           WNT+IRG+  I     AF LY+ M   G +  +  T+ FL+K    +  + LG+ +H  +
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 186 LKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEAL 245
           ++ G  S +YV+N+L+H+Y     V  A  +FD+MP+ DLVAWN+VI+     G   EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 246 GLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDMY 305
            L+ +M   G++PD  T+V  +SAC+ +GAL  G+ VH Y+      + +   N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 306 AKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVTF 365
           A+CG VE+A+ +F+ +  KN V+W ++I+GLA +G  ++A+ LF  M + +   P  +TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 366 LGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSMP 425
           +G+L AC+H G V+EG +YF  M + + I+P ++H+G MVD+L RAG V++AY+ I+SMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 426 MECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMIK 485
           M+ N VIWRTLL  C +HG+  L E  R  +L++EP+HS DYVLL+NMYAS  +W+++ K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 486 TRKSMQRKGVQKPEPGNSFLEI 504
            RK M R GV+K  PG+S +E+
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468

BLAST of ClCG06G016090 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 355.1 bits (910), Expect = 9.1e-98
Identity = 183/451 (40.58%), Postives = 277/451 (61.42%), Query Frame = 0

Query: 56  QRFLSLFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVW-DHGDMNYAVVVFNR 115
           Q  + L  +C+++++L Q+ A  I+   +   FV  KLI FC        M+YA  +F  
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 89

Query: 116 IENPDGFLWNTMIRGFGRISKLPKAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLG 175
           +  PD  ++N+M RG+ R +   + F L+  +LE GI  +N+TF  LLK      ++  G
Sbjct: 90  MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 149

Query: 176 KQLHVNILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSC 235
           +QLH   +KLGLD +VYV  TLI+MY   + V  AR +FD + +P +V +N +I  +   
Sbjct: 150 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 209

Query: 236 GMYNEALGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVF 295
              NEAL LF +M    ++P+E TL+  +S+C+ LG+LD G+W+H Y K +   K + V 
Sbjct: 210 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 269

Query: 296 NSLIDMYAKCGAVEDAREMFNTISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVE 355
            +LIDM+AKCG+++DA  +F  +  K+   W+ MI+  A HG AE ++ +F  M +E V+
Sbjct: 270 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 329

Query: 356 TPDGVTFLGVLCACNHGGKVEEGRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAY 415
            PD +TFLG+L AC+H G+VEEGRKYF  M   F I P++KHYGSMVD+L RAG +E+AY
Sbjct: 330 -PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 389

Query: 416 QLIRSMPMECNAVIWRTLLATCRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSG 475
           + I  +P+    ++WR LLA C  H N+ L E+V   + E++  H  DYV+L+N+YA + 
Sbjct: 390 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 449

Query: 476 QWNEMIKTRKSMQ-RKGVQKPEPGNSFLEIN 505
           +W  +   RK M+ RK V+   PG S +E+N
Sbjct: 450 KWEYVDSLRKVMKDRKAVK--VPGCSSIEVN 476

BLAST of ClCG06G016090 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 350.1 bits (897), Expect = 2.9e-96
Identity = 170/482 (35.27%), Postives = 287/482 (59.54%), Query Frame = 0

Query: 55  EQRFLSLFKQCSTVKDLNQVHARIIQLGFDQNLFVIGKLIEFCAVWDHGDMNYAVVVFNR 114
           E  F+   ++  +  +  +++A II  G  Q+ F++ K+++FC   +  DM+YA  +FN+
Sbjct: 10  ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69

Query: 115 IENPDGFLWNTMIRGFGRISKLPKAFELYKRMLEKGI-AANNFTFSFLLKISGQLGSIML 174
           + NP+ FL+N++IR +   S       +YK++L K     + FTF F+ K    LGS  L
Sbjct: 70  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129

Query: 175 GKQLHVNILKLGLDSHVYVRNTLIHMYGRLKYVKIARNLFDEMPKPDLVAWNT------- 234
           GKQ+H ++ K G   HV   N LI MY +   +  A  +FDEM + D+++WN+       
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189

Query: 235 ------------------------VIDCHVSCGMYNEALGLFLQMLQSGVEPDEATLVVT 294
                                   +I  +   G Y EA+  F +M  +G+EPDE +L+  
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249

Query: 295 VSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNTISGKNI 354
           + +C+ LG+L+ G+W+H Y +     K   V N+LI+MY+KCG +  A ++F  + GK++
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309

Query: 355 VTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVTFLGVLCACNHGGKVEEGRKYFD 414
           ++W+TMI G A HG+A  A+  F+ M   KV+ P+G+TFLG+L AC+H G  +EG +YFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369

Query: 415 LMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLATCRMHGNV 474
           +M + + I+P ++HYG ++D+L RAG +E A ++ ++MPM+ ++ IW +LL++CR  GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429

Query: 475 KLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMIKTRKSMQRKGVQKPEPGNSFLE 505
            +      H++E+EP+   +YVLLAN+YA  G+W ++ + RK ++ + ++K  PG S +E
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487

BLAST of ClCG06G016090 vs. TAIR 10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-95
Identity = 181/487 (37.17%), Postives = 293/487 (60.16%), Query Frame = 0

Query: 21  IKFPNFQLLIPKFIWSSDRKTATDTIPNGSYFAKEQRFLSLFKQCSTVKDLNQVHARIIQ 80
           IK P  Q L+      + R   T      ++  KEQ  L L K+C  + +  QVHAR I+
Sbjct: 2   IKAPILQSLL------ASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIK 61

Query: 81  LG-FDQNLFVIGKLIEFCA--VWDHGDMNYAVVVFNRIENPDGFLWNTMIRGFGRISKLP 140
           L  F  + F    ++  CA   W++  MNYA  +F  I++P  F +NTMIRG+  +    
Sbjct: 62  LSLFYSSSFSASSVLAKCAHSGWEN-SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFE 121

Query: 141 KAFELYKRMLEKGIAANNFTFSFLLKISGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLI 200
           +A   Y  M+++G   +NFT+  LLK   +L SI  GKQ+H  + KLGL++ V+V+N+LI
Sbjct: 122 EALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLI 181

Query: 201 HMYGRLKYVKIARNLFDEMPKPDLVAWNTVIDCHVSCGMYNEALGLFLQML-QSGVEPDE 260
           +MYGR   ++++  +F+++      +W++++      GM++E L LF  M  ++ ++ +E
Sbjct: 182 NMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEE 241

Query: 261 ATLVVTVSACSALGALDFGRWVHSYVKCNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNT 320
           + +V  + AC+  GAL+ G  +H ++  N     I V  SL+DMY KCG ++ A  +F  
Sbjct: 242 SGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK 301

Query: 321 ISGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAEKVETPDGVTFLGVLCACNHGGKVEE 380
           +  +N +T++ MI GLA HG+ E AL +FS M+ E +E PD V ++ VL AC+H G V+E
Sbjct: 302 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE-PDHVVYVSVLNACSHSGLVKE 361

Query: 381 GRKYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLATC 440
           GR+ F  M K   ++PT +HYG +VD+LGRAG +EEA + I+S+P+E N VIWRT L+ C
Sbjct: 362 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 421

Query: 441 RMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMIKTRKSMQRKGVQKPEP 500
           R+  N++LG+     +L++   +  DY+L++N+Y+    W+++ +TR  +  KG+ K  P
Sbjct: 422 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGL-KQTP 479

Query: 501 GNSFLEI 504
           G S +E+
Sbjct: 482 GFSIVEL 479

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880037.15.1e-27692.49pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida][more]
XP_022987183.13.1e-27391.29pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_023516362.14.0e-27391.29pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
KAG6589516.15.2e-27391.49Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... [more]
KAG7023204.15.2e-27391.49Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... [more]
Match NameE-valueIdentityDescription
Q0WQW51.7e-10141.42Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A8MQA31.8e-9841.40Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q8LK931.3e-9640.58Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... [more]
Q9SIL54.1e-9535.27Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
Q9C6T22.0e-9437.17Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1JI601.5e-27391.29pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A6J1E6Y68.2e-27291.09pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A5A7UQ052.8e-26487.75Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BWU92.8e-26487.75pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A0A0LUI86.3e-26487.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G59720.11.2e-10241.42Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21065.11.3e-9941.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G02980.19.1e-9840.58Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20540.12.9e-9635.27mitochondrial editing factor 21 [more]
AT1G31920.11.4e-9537.17Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 397..421
e-value: 0.004
score: 17.3
coord: 194..217
e-value: 0.0091
score: 16.2
coord: 463..491
e-value: 0.18
score: 12.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 219..266
e-value: 1.7E-10
score: 40.9
coord: 118..163
e-value: 3.4E-10
score: 40.0
coord: 320..368
e-value: 3.4E-9
score: 36.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 122..154
e-value: 3.3E-7
score: 28.1
coord: 222..256
e-value: 6.4E-9
score: 33.5
coord: 293..321
e-value: 0.003
score: 15.6
coord: 359..393
e-value: 0.0032
score: 15.5
coord: 323..357
e-value: 2.3E-6
score: 25.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 119..153
score: 11.575191
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 12.309597
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 10.764054
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 354..498
e-value: 1.7E-22
score: 82.2
coord: 270..353
e-value: 2.1E-16
score: 62.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 171..269
e-value: 7.9E-22
score: 79.5
coord: 52..170
e-value: 1.6E-14
score: 55.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 289..467
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 46..504
NoneNo IPR availablePANTHERPTHR47926:SF177PPR CONTAINING PLANT-LIKE PROTEINcoord: 46..504

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G016090.1ClCG06G016090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding