ClCG06G015480 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G015480
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Replication termination factor 2
Location	CG_Chr06: 28819162 .. 28820468 (-)
RNA-Seq Expression	ClCG06G015480
Synteny	ClCG06G015480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCCGAAAAATCAACACCGTCTTCAGATCTTCCTTCATTCTCCCGACCTTCCAATTCAATCCAAAATCGTAAACCTACCACAAACTCCGGCCCAAACCCTAGAGGATCTGAAATTCTCTCTTCTCCCTGAAACACTCAATTCACGGGTTGCGTCATCTTTCTACTTCACCCTCAATGGGAAACCCCTTCTTAATTCCACCACGATTCCCAGTTCTCTAATTCCCCCTCTCTCTACCTTAATCTTAAGAACCAGGGTCCTTGGGGGTGGTGGTGATGGCGGTGCGACAGGGGCCGAATCTCGTGACTGTTATCTTAATATGTACGCAGAGAAGAAACCCGATAAAGTCGACCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATGTCTTCAATAAGGAGTCGCTCGTGCAGGCTTTGCTAGAGAAGAAACTGCCAAAAGGATTCGGGCATATCAAAGGTTTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCTGGTACAGAATCGCGTGGGAATGCAATGTCAGAGCCGCGGTTTCAGTGTCCGATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTTTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTAAGGACAGAGATAAGTTTGTGATTAATGGGAGTGAGGAGGAGGTAGAAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAGGAGAAGAAGATGAAGAAAGTGAGGAATGGGGAAGTGGGTATGAAAGGAGATGTGAGTTTGGATATGGCAGCATCCCGCTTGTCTGGTAAAAAGCACGGCATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAACCTGAAAGACATGAGCGGCCAGATGGTGGAGTTCAGGTAAAGGTTGCAGCAAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAGACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTGATTGGTGTTAAGAACTGCTGAGATGGGTTAATGGTAATTCTTCTATTATCATTTCTAATTAATGTAAGATATTAGTTTACAGTCACCAACTGCTATTACTCTGTTAAGCTGTTTTACATTTTTAGTAATATTGATGAAAATCTTGTG

mRNA sequence

ATGCATCCGAAAAATCAACACCGTCTTCAGATCTTCCTTCATTCTCCCGACCTTCCAATTCAATCCAAAATCGTAAACCTACCACAAACTCCGGCCCAAACCCTAGAGGATCTGAAATTCTCTCTTCTCCCTGAAACACTCAATTCACGGGTTGCGTCATCTTTCTACTTCACCCTCAATGGGAAACCCCTTCTTAATTCCACCACGATTCCCAGTTCTCTAATTCCCCCTCTCTCTACCTTAATCTTAAGAACCAGGGTCCTTGGGGGTGGTGGTGATGGCGGTGCGACAGGGGCCGAATCTCGTGACTGTTATCTTAATATGTACGCAGAGAAGAAACCCGATAAAGTCGACCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATGTCTTCAATAAGGAGTCGCTCGTGCAGGCTTTGCTAGAGAAGAAACTGCCAAAAGGATTCGGGCATATCAAAGGTTTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCTGGTACAGAATCGCGTGGGAATGCAATGTCAGAGCCGCGGTTTCAGTGTCCGATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTTTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTAAGGACAGAGATAAGTTTGTGATTAATGGGAGTGAGGAGGAGGTAGAAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAGGAGAAGAAGATGAAGAAAGTGAGGAATGGGGAAGTGGGTATGAAAGGAGATGTGAGTTTGGATATGGCAGCATCCCGCTTGTCTGGTAAAAAGCACGGCATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAACCTGAAAGACATGAGCGGCCAGATGGTGGAGTTCAGGTAAAGGTTGCAGCAAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAGACATATTCTTGTAGATCTCTTCCACTCGTCACCAACTGCTATTACTCTGTTAAGCTGTTTTACATTTTTAGTAATATTGATGAAAATCTTGTG

Coding sequence (CDS)

ATGCATCCGAAAAATCAACACCGTCTTCAGATCTTCCTTCATTCTCCCGACCTTCCAATTCAATCCAAAATCGTAAACCTACCACAAACTCCGGCCCAAACCCTAGAGGATCTGAAATTCTCTCTTCTCCCTGAAACACTCAATTCACGGGTTGCGTCATCTTTCTACTTCACCCTCAATGGGAAACCCCTTCTTAATTCCACCACGATTCCCAGTTCTCTAATTCCCCCTCTCTCTACCTTAATCTTAAGAACCAGGGTCCTTGGGGGTGGTGGTGATGGCGGTGCGACAGGGGCCGAATCTCGTGACTGTTATCTTAATATGTACGCAGAGAAGAAACCCGATAAAGTCGACCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATGTCTTCAATAAGGAGTCGCTCGTGCAGGCTTTGCTAGAGAAGAAACTGCCAAAAGGATTCGGGCATATCAAAGGTTTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCTGGTACAGAATCGCGTGGGAATGCAATGTCAGAGCCGCGGTTTCAGTGTCCGATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTTTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTAAGGACAGAGATAAGTTTGTGATTAATGGGAGTGAGGAGGAGGTAGAAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAGGAGAAGAAGATGAAGAAAGTGAGGAATGGGGAAGTGGGTATGAAAGGAGATGTGAGTTTGGATATGGCAGCATCCCGCTTGTCTGGTAAAAAGCACGGCATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAACCTGAAAGACATGAGCGGCCAGATGGTGGAGTTCAGGTAAAGGTTGCAGCAAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAGACATATTCTTGTAGATCTCTTCCACTCGTCACCAACTGCTATTACTCTGTTAAGCTGTTTTACATTTTTAGTAATATTGATGAAAATCTTGTG

Protein sequence

MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLNGKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLVTNCYYSVKLFYIFSNIDENLV

Homology

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BLAST of ClCG06G015480 vs. NCBI nr
Match: XP_038879920.1 (replication termination factor 2 [Benincasa hispida])

HSP 1 Score: 704.5 bits (1817), Expect = 5.2e-199
Identity = 363/388 (93.56%), Postives = 373/388 (96.13%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKN+HRLQIFLHS DL IQS+IVNLPQ+PAQTLEDLKFSLLPETL SRVASSFYFTLN
Sbjct: 1   MHPKNEHRLQIFLHSLDLQIQSQIVNLPQSPAQTLEDLKFSLLPETLASRVASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL +STTIPSSL+PPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLPDSTTIPSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSVIPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSVIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSK--SKEKKMKKVRNGEVGMKGDVSLDMA 300
           CHAEF +RDKFVINGSEEEVEEMRERMEEEKSK  SKEKK KKVRN E G+ GD+S+D A
Sbjct: 241 CHAEFTNRDKFVINGSEEEVEEMRERMEEEKSKSRSKEKKTKKVRNEEGGINGDMSVDFA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
           ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLVTN 387
           VYASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 388

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BLAST of ClCG06G015480 vs. NCBI nr
Match: XP_008444038.1 (PREDICTED: protein RTF2 homolog [Cucumis melo] >KAA0035058.1 protein RTF2-like protein [Cucumis melo var. makuwa] >TYK03620.1 protein RTF2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 687.6 bits (1773), Expect = 6.6e-194
Identity = 356/388 (91.75%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHRLQIFLHSPDL IQSKIV+LPQT A+TLEDLKFSLL ETL SRVASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CH EF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDV++D+A
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE++ LEKVSAKPERHER DGG QVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLVTN 387
           VYASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

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BLAST of ClCG06G015480 vs. NCBI nr
Match: XP_011655923.1 (replication termination factor 2 [Cucumis sativus] >KGN65240.1 hypothetical protein Csa_019614 [Cucumis sativus])

HSP 1 Score: 682.6 bits (1760), Expect = 2.1e-192
Identity = 353/388 (90.98%), Postives = 365/388 (94.07%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHR QIFL SPDL I+SKIVNLPQTPA+TLEDLKFSLL E L SR+ASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CHAEF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDVS+D+A
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKH IEVK+LEKVSAKPER ER DGG QVK A SNGAVKRFKAADMVPANATKE
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLVTN 387
           VYASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

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BLAST of ClCG06G015480 vs. NCBI nr
Match: XP_022933589.1 (protein RTF2 homolog [Cucurbita moschata])

HSP 1 Score: 669.8 bits (1727), Expect = 1.4e-188
Identity = 342/386 (88.60%), Postives = 358/386 (92.75%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           M+PKNQHRLQ F+HSPDL IQSKIVNL QT AQ+L DLK SL+  T  SR+ASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+S TI SSL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLS++PGTESRGNA+SE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEF DRDKFVINGSEEEV  MRERMEEEK+KSKEKK KKVR GEVGM GDVS+D+A+S
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIE KAL KVSAKPE+HERPD GVQVKVAASNGAVKRFKAADM PANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLVTN 387
           ASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

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BLAST of ClCG06G015480 vs. NCBI nr
Match: XP_022135450.1 (protein RTF2 homolog [Momordica charantia])

HSP 1 Score: 669.5 bits (1726), Expect = 1.9e-188
Identity = 341/386 (88.34%), Postives = 361/386 (93.52%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQ RLQIF+HSPDL IQSKI+NL +T AQTLEDLKFSLLP+TL  R ASSFYFTLN
Sbjct: 1   MHPKNQQRLQIFVHSPDLQIQSKILNLARTSAQTLEDLKFSLLPQTLAPRSASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+ST + SSLI PLSTLILRTR+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTPVTSSLISPLSTLILRTRIHGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGH+KGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHVKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           +LS IPGTES  NA+S PRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 SLSAIPGTESGSNAISGPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEFKDRDK VINGSEEEV  +RERMEEEKSKSKEK++KKV+NGEVGM GDVS+D+A+S
Sbjct: 241 CHAEFKDRDKLVINGSEEEVAVLRERMEEEKSKSKEKRLKKVKNGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIEVKA EKVSAK ER+ERPDGG+QVKVAA+NGAVKRFKAADM P NATKEVY
Sbjct: 301 RLSGKKHGIEVKASEKVSAKLERNERPDGGIQVKVAANNGAVKRFKAADMAPPNATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLVTN 387
           ASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

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BLAST of ClCG06G015480 vs. ExPASy Swiss-Prot
Match: Q3T1J8 (Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-34
Identity = 101/293 (34.47%), Postives = 156/293 (53.24%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG++E+VE ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAKLEKK 198

Query: 292 MKKVRNGEVGMKGDVSLDMA--ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVA 351
            KK +  E   K  +S D A  +   +GK    +    EK S+   R    +G    KV 
Sbjct: 199 TKKPKTAESASKLGISQDSAGPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKVG 258

Query: 352 ASN-GAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLVTNCY 389
               GA+KR      +  +   E Y SIFTS   +   +  S   +   + C+
Sbjct: 259 KPPCGALKR-----SIADSEESETYKSIFTSHSSAKRSKEESAHWVTHTSYCF 306

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BLAST of ClCG06G015480 vs. ExPASy Swiss-Prot
Match: Q99K95 (Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.3e-32
Identity = 101/294 (34.35%), Postives = 155/294 (52.72%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG++E+VE +++RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAKLEKK 198

Query: 292 MKKVRNG-EVGMKGDVSLDMA--ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKV 351
            KK +   E   K   + D A  +   SGK    +    EK S    R    +G    KV
Sbjct: 199 TKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSASGKV 258

Query: 352 AASN-GAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLVTNCY 389
                GA+KR      +  +   E Y SIFTS   +   +  S   +   + C+
Sbjct: 259 GKPPCGALKR-----SIADSEESETYKSIFTSHSSAKRSKEESAHWVTHTSYCF 307

[Close]

BLAST of ClCG06G015480 vs. ExPASy Swiss-Prot
Match: Q5R9P9 (Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.8e-30
Identity = 97/295 (32.88%), Postives = 154/295 (52.20%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG++E+V+ ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAKLEKK 198

Query: 292 MKKVRNGEVGMKGDVSLDM--AASRLSGKKHGIEVKALEK---VSAKPERHERPDGGVQV 351
            KK +  E   K DVS +    +   +GK     + + EK   ++ K         G   
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTATNESSSGKAG 258

Query: 352 KVAASNGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLVTNCY 389
           K     GA KR      +  +   E Y S+FT+   +   +  S   +   + C+
Sbjct: 259 KPPC--GATKR-----SIADSEESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF 306

[Close]

BLAST of ClCG06G015480 vs. ExPASy Swiss-Prot
Match: Q4R594 (Replication termination factor 2 OS=Macaca fascicularis OX=9541 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.2e-30
Identity = 95/293 (32.42%), Postives = 152/293 (51.88%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG+ E+V+ ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARMEERRLRAKLEKK 198

Query: 292 MKKVRNGEVGMKGDVSLDM--AASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVA 351
            KK +  E   K DVS +    +   +GK     + + EK +    +    +     K  
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEETSLDSREKKNNLAPKSAATNESFSGKAG 258

Query: 352 AS-NGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLVTNCY 389
               GA KR      +  +   E Y S+FT+   +   +  S   +   + C+
Sbjct: 259 KPLCGATKR-----SIADSEESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF 306

[Close]

BLAST of ClCG06G015480 vs. ExPASy Swiss-Prot
Match: A5GFW7 (Replication termination factor 2 OS=Sus scrofa OX=9823 GN=RTF2 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.2e-30
Identity = 93/293 (31.74%), Postives = 151/293 (51.54%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE--------SRGNAMSEPRFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E         + + +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG++E+V  ++ RMEE + ++K  KK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVAMLQTRMEERRLRAKLGKK 198

Query: 292 MKKVRNGEVGMKGDVSLDM--AASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVA 351
            KK +  E   K D+S +    +   +GK     + + EK ++   R     G    K  
Sbjct: 199 TKKPKAAESVSKSDISEEAPGPSKMKAGKPEETSLDSREKKTSSAPRSAAAHGSSSGKAG 258

Query: 352 AS-NGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLVTNCY 389
               GA KR      +  +   E Y S+FT+   +   +  S   +   + C+
Sbjct: 259 KPVCGAPKR-----SIADSGESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF 306

[Close]

BLAST of ClCG06G015480 vs. ExPASy TrEMBL
Match: A0A5A7SWS4 (Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00470 PE=3 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.2e-194
Identity = 356/388 (91.75%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHRLQIFLHSPDL IQSKIV+LPQT A+TLEDLKFSLL ETL SRVASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CH EF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDV++D+A
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE++ LEKVSAKPERHER DGG QVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLVTN 387
           VYASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of ClCG06G015480 vs. ExPASy TrEMBL
Match: A0A1S3B9F3 (Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.2e-194
Identity = 356/388 (91.75%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHRLQIFLHSPDL IQSKIV+LPQT A+TLEDLKFSLL ETL SRVASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CH EF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDV++D+A
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE++ LEKVSAKPERHER DGG QVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLVTN 387
           VYASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of ClCG06G015480 vs. ExPASy TrEMBL
Match: A0A0A0LTI5 (Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.0e-192
Identity = 353/388 (90.98%), Postives = 365/388 (94.07%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHR QIFL SPDL I+SKIVNLPQTPA+TLEDLKFSLL E L SR+ASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CHAEF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDVS+D+A
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKH IEVK+LEKVSAKPER ER DGG QVK A SNGAVKRFKAADMVPANATKE
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLVTN 387
           VYASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of ClCG06G015480 vs. ExPASy TrEMBL
Match: A0A6J1F067 (Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 PE=3 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 6.9e-189
Identity = 342/386 (88.60%), Postives = 358/386 (92.75%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           M+PKNQHRLQ F+HSPDL IQSKIVNL QT AQ+L DLK SL+  T  SR+ASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+S TI SSL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLS++PGTESRGNA+SE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEF DRDKFVINGSEEEV  MRERMEEEK+KSKEKK KKVR GEVGM GDVS+D+A+S
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIE KAL KVSAKPE+HERPD GVQVKVAASNGAVKRFKAADM PANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLVTN 387
           ASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of ClCG06G015480 vs. ExPASy TrEMBL
Match: A0A6J1C136 (Replication termination factor 2 OS=Momordica charantia OX=3673 GN=LOC111007406 PE=3 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 9.0e-189
Identity = 341/386 (88.34%), Postives = 361/386 (93.52%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQ RLQIF+HSPDL IQSKI+NL +T AQTLEDLKFSLLP+TL  R ASSFYFTLN
Sbjct: 1   MHPKNQQRLQIFVHSPDLQIQSKILNLARTSAQTLEDLKFSLLPQTLAPRSASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+ST + SSLI PLSTLILRTR+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTPVTSSLISPLSTLILRTRIHGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGH+KGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHVKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           +LS IPGTES  NA+S PRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 SLSAIPGTESGSNAISGPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEFKDRDK VINGSEEEV  +RERMEEEKSKSKEK++KKV+NGEVGM GDVS+D+A+S
Sbjct: 241 CHAEFKDRDKLVINGSEEEVAVLRERMEEEKSKSKEKRLKKVKNGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIEVKA EKVSAK ER+ERPDGG+QVKVAA+NGAVKRFKAADM P NATKEVY
Sbjct: 301 RLSGKKHGIEVKASEKVSAKLERNERPDGGIQVKVAANNGAVKRFKAADMAPPNATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLVTN 387
           ASIFTSSRKSDFKETYSCRSLPL  N
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of ClCG06G015480 vs. TAIR 10
Match: AT5G58020.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). )

HSP 1 Score: 390.2 bits (1001), Expect = 2.0e-108
Identity = 228/386 (59.07%), Postives = 263/386 (68.13%), Query Frame = 0


Query: 8   RLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSF---YFTLNGKPL 67
           R QIF+ SPD     K+V L   PAQ+L  L  S +   L S    SF     TL+GK L
Sbjct: 4   RRQIFVKSPDC---QKVVALQLDPAQSL--LTLSGITSLLESSQRISFSACSITLDGKLL 63

Query: 68  LNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 127
             ST I  S +P +S L L  R+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL
Sbjct: 64  NGSTRIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 123

Query: 128 SKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSV 187
           SKWLNCALSNEPL EPCVID LGN+FNKE LV ALL K+LPK F +IKGLKDM+ I L+ 
Sbjct: 124 SKWLNCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTP 183

Query: 188 IPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAE 247
           + G++      +  +FQCP++GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCHA+
Sbjct: 184 VAGSDGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHAD 243

Query: 248 FKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKK--MKKVRNGEVGMKGDVSLDMAASRL 307
            KD DK VING+EEEV+ +RERMEEEK+K +EKK   KK +NG                 
Sbjct: 244 VKDSDKIVINGTEEEVDLLRERMEEEKAKLREKKGVSKKSKNG----------------- 303

Query: 308 SGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNG-AVKRFKAADMVPANATKEVYA 367
                      +    AK  + +  DG V       NG  VK+FKAAD VP NATKEVYA
Sbjct: 304 --------AAVVADTGAKVAKRQIEDGNVN-----GNGITVKKFKAADKVPVNATKEVYA 354

Query: 368 SIFTSS-RKSDFKETYSCRSLPLVTN 387
           S+FTSS +KSDF+ETYSCRSLPL  N
Sbjct: 364 SLFTSSKKKSDFRETYSCRSLPLGRN 354

The following BLAST results are available for this feature:

BLAST of ClCG06G015480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879920.1	5.2e-199	93.56	replication termination factor 2 [Benincasa hispida]	[more]
XP_008444038.1	6.6e-194	91.75	PREDICTED: protein RTF2 homolog [Cucumis melo] >KAA0035058.1 protein RTF2-like p...	[more]
XP_011655923.1	2.1e-192	90.98	replication termination factor 2 [Cucumis sativus] >KGN65240.1 hypothetical prot...	[more]
XP_022933589.1	1.4e-188	88.60	protein RTF2 homolog [Cucurbita moschata]	[more]
XP_022135450.1	1.9e-188	88.34	protein RTF2 homolog [Momordica charantia]	[more]

BLAST of ClCG06G015480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T1J8	4.2e-34	34.47	Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1	[more]
Q99K95	2.3e-32	34.35	Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1	[more]
Q5R9P9	4.8e-30	32.88	Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1	[more]
Q4R594	8.2e-30	32.42	Replication termination factor 2 OS=Macaca fascicularis OX=9541 GN=RTF2 PE=2 SV=...	[more]
A5GFW7	8.2e-30	31.74	Replication termination factor 2 OS=Sus scrofa OX=9823 GN=RTF2 PE=3 SV=1	[more]

BLAST of ClCG06G015480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWS4	3.2e-194	91.75	Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B9F3	3.2e-194	91.75	Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV...	[more]
A0A0A0LTI5	1.0e-192	90.98	Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3...	[more]
A0A6J1F067	6.9e-189	88.60	Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 P...	[more]
A0A6J1C136	9.0e-189	88.34	Replication termination factor 2 OS=Momordica charantia OX=3673 GN=LOC111007406 ...	[more]

BLAST of ClCG06G015480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58020.1	2.0e-108	59.07	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..284
None	No IPR available	PFAM	PF04641	Rtf2	coord: 90..370 e-value: 3.3E-74 score: 249.6
None	No IPR available	PANTHER	PTHR12775:SF1	BNACNNG39770D PROTEIN	coord: 7..297
None	No IPR available	PANTHER	PTHR12775:SF1	BNACNNG39770D PROTEIN	coord: 333..386
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 333..386
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 7..297
IPR027799	Replication termination factor 2, RING-finger	CDD	cd16653	RING-like_Rtf2	coord: 200..245 e-value: 4.41952E-26 score: 97.3115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G015480.1	ClCG06G015480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902979	mitotic DNA replication termination
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity