ClCG06G015400 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCGATTCAACGTTCAGGTTCAGCCATGGATTTTTGGAACAAAGCTCGAAGTTTTGCCGAGGAAGCAGCGAAGCGCTCGCAGGAGCTCACTTTTGTAGCTGCAAGGCGTTCCCAAGAGCTCACGATTGGATCCTCTCGATTGTCTGACATCGTTTCCGAGACTGCTAAACGCTCCAAGGAATTCGCTACTGAGGCCTCGAAGCGAGCTGATCAAATCAAAGCGGAAGCTGTTAAGCGAGCCGATCTTATCAAGCACTTGGTCGAGGGGACTCCGCCGTCTGGCTCCCTCGAGAAGAACGCTTCCGACGAAGAGGCGCGGGAGGAGGATTTGCAGAGGTTTGGGATAAACGAAGAGCTGAGGGACTTCGTCAAAGGCATCACTATGAGTACATTTCGGGATTTTCCACTCGAAGGTAATTGTCTAATTGGTTCGTTTTCTTGAATTGTCTGTCTCCTTGACTGGTTGCTTGAAAGATTGAGGATCATAGAACTAGGAATCGCCCGGGGGGGTGGGGGGGATGATTGGAGGTAAAACAGGGGTAGCTCAAATTAATGTAGTCCGCGATTATCAAGCATTTACGCTCTACAAGTGAAGATTGTTAAGCTTAACTGAGTTGTCGAATATCGAAGGTTAAATCTCAATATAGGAAGCCATTGAATTTGAAGAACTACCTTAATTGGCACGAACCACCCCTATTTATTCATTTCCCGAAAAAAGAATCCTTAAGCTCTATGCATCCACGTACTTAAATCGAGTCTTTACAATATCGATCCTTGCGGTGTTCAGGAATATTTGTAATGTAATAAGTTGAAGTTTGTTTAACAGGTTTAATATGGAGCTTTATGGTCAGTACCATTGCAATTATTTGAAGATAATGGGGGAATGACTATTCCATTTGAACTGAGTAAGAAAACCAACCATTAATTAAGTGCATAGCCTTGTTTAAGCCAATATAAGTTGCCGGTTGAGTTTTACTCTAGTTTGGTTAGAAATTTGGTTAGTGGAAGTATGTGTGGAGCTGGAATTGATATTGTTTCTCCAGATTTTGGTTACATCAACCCCGTTAAAATCTCATGTTCATGAAATTATATGCACCAGAATAGAACTTTTGCAATGTCTAACTTTTAAAGCTGAGTATCCCATTGAGATGTTGTTATGACCTCTTCCGGATGTTGAACTGTTTCCCTCTTTTTTTCTAACTTTTTAACGGTGGTAAATATAATATGTTTATTTCTCTCAACCACCAGGCTCCAAGACCTTATTTCTAAAACTAGTTCATTTCCCTTTGTGTAGATGATTCACAAATGTCCAATGTCCCCACAGTCTCAAATATTAGTCAGGATCTAACTGAGTGGCAGGCGAAGCATGCAAGCCTTGTTCTTTCAACTGTCAAGGTACTATCGCTAATAGACCTGGCAACAGTGAAGATGAATGTAGCCTTCTCTATCAACTGATAGGAACATTAGTTGTGCAGTTCATTGATATTGTATATAAATCAAGAAATGTGCCCACATGCCATGCTACAATGTATATGCTTTTAACCTTCATTTTAATTTAATGTGGCAGGAAATTTCTAAGTTACGTTATGAATTATGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGCTGGTGAACAGACACATTGCACCGTAAGTTTAAGTCTTGAGTTTGAGCCTTGACTCTGGCCTTAAACTTTGAATTTTGGTTGCAAAAATCATCACAGCTTCTAGATTATTCGAAGGAACAAGTTAAAAACCATACTTGCTATTGGATTGAAGACTTAAAAACTTAGAATTTTGAGAAAAAAGTACTTCCTTTTCTAGATTGGATGCTGGGGTGGGTACATTTATTGTGTTAGGACTTAGGTTGTGTTTTAAACTTACCTGGACTAAGTGCAAAATGGGACTAAGTTCTCAGCTATTATGTTGATTACTGAGTAGTAAAGAAATTTTGTTATGCTTGCATGCGTTCTACTGAGGCTTTATTTCTTATTGAGCACATACCAAATGGTCATTGGAATAGCAGCTTCCATCTTTTTATTAGTCTCAAATCTGAATGTTTCATTATCCATCTTTTTATTTATTTTATTTTTTGTTTTTTGTTTTTTTTTTTTGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGAATTCTCTGTCTAGTGAATTTACCTGTAGTATTTTACTGATCCACTGTAGAAAAACCTTCTACATGAGTGTTTTTGAAATATTTCTTAGACAACTTATTTTAGTTTTGCCCGACCACTTTGCTTTACTGAATATTGTAATGAATAAGTTGATGATAAACAAACATGCAATTGTGTCCTAATCTTCATGGCTTCATTTTCTTAAAAAATGTCCATTAACCAAATGTCAAAATTTTCTTATTCTATATTCTCTTACTTCTTCAGCTATGAGAAAAAGTACATGGAGGATGTCATACTGAAATCAGATAAACAAGCTGAAGATGGAAAAATGGAACCTGTTAAAGCTGAAATAACATCTACATCTCAGGAGAAGAAAAATGTTCCAACCTCCTCATCAAGTGACCAAGACTTGGATGTTTTTCTTCTTGGGGATCTTGGAGACAGCGATGAAGGTCCAGGTATGGTGCCACAATTTGTTGATGTCTGCTTTGTACTAATGATTTCTATCAAAACATGCCTCTAAAAAATCTTTGAAGTTTAAACAAAAATTCATTTCTTTGACGTTATTGATTTTGGCTATTCAAGATTGTTAATGATATTGATTGCACTACAACACATGAACTGTGAAAAATTTTTGTTGTCAAGATGCTGTATTGGCAGTTGGCATATATCTTGTTAAATCCTACTGAAGCTTTTTAGAAGGCAGAACAAAAAATTGATCACATCATTATCTAAAAGGAAGACACTATAAAAATGTGATTATTTTGCTTGAAAACAAGTGATTTGATGGAGCGGCTATCATTTGTCACTTCCATAGCTTCAAACATTATTCGGTGCAGTTATTAGCAATGTGCGGAGCATATGCACAGTCCATTTATATAATTGCTGTTAATGTCATTTTGGCATTTGAGGTTGGTGCCGCTGATCTTCTTCCTGGTTTTTCAGATGATGGGGATGAGGGCTTTGATGATGATTTTGACAAAATGGTTGACAGTTCGGTAAGTAGAATTTATCATTTGCTTTACGTCCCCATTTCCATGTTTGACTAATCTGTTGTGCTTAGATCCTCATATTTTCATTGATGTCTCTTATGAATTTTATGTGGCTATGTTGCTGAGTTTTTGCGGTGAATTGGATTTAGGATCCCCTTCTAGAGATTTCAACCATTGTGCAAATTTTGAGAAATGTTTTCTGA TGCGATTCAACGTTCAGGTTCAGCCATGGATTTTTGGAACAAAGCTCGAAGTTTTGCCGAGGAAGCAGCGAAGCGCTCGCAGGAGCTCACTTTTGTAGCTGCAAGGCGTTCCCAAGAGCTCACGATTGGATCCTCTCGATTGTCTGACATCGTTTCCGAGACTGCTAAACGCTCCAAGGAATTCGCTACTGAGGCCTCGAAGCGAGCTGATCAAATCAAAGCGGAAGCTGTTAAGCGAGCCGATCTTATCAAGCACTTGGTCGAGGGGACTCCGCCGTCTGGCTCCCTCGAGAAGAACGCTTCCGACGAAGAGGCGCGGGAGGAGGATTTGCAGAGGTTTGGGATAAACGAAGAGCTGAGGGACTTCGTCAAAGGCATCACTATGAGTACATTTCGGGATTTTCCACTCGAAGATGATTCACAAATGTCCAATGTCCCCACAGTCTCAAATATTAGTCAGGATCTAACTGAGTGGCAGGCGAAGCATGCAAGCCTTGTTCTTTCAACTGTCAAGGAAATTTCTAAGTTACGTTATGAATTATGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGCTGGTGAACAGACACATTGCACCCTATGAGAAAAAGTACATGGAGGATGTCATACTGAAATCAGATAAACAAGCTGAAGATGGAAAAATGGAACCTGTTAAAGCTGAAATAACATCTACATCTCAGGAGAAGAAAAATGTTCCAACCTCCTCATCAAGTGACCAAGACTTGGATGTTTTTCTTCTTGGGGATCTTGGAGACAGCGATGAAGGTCCAGGTATGGTGCCACAATTTGTTGATGTCTGCTTTTTATTAGCAATGTGCGGAGCATATGCACAGTCCATTTATATAATTGCTGTTAATGTCATTTTGGCATTTGAGGTTGGTGCCGCTGATCTTCTTCCTGGTTTTTCAGATGATGGGGATGAGGGCTTTGATGATGATTTTGACAAAATGGTTGACAGTTCGGATCCCCTTCTAGAGATTTCAACCATTGTGCAAATTTTGAGAAATGTTTTCTGA ATGGATTTTTGGAACAAAGCTCGAAGTTTTGCCGAGGAAGCAGCGAAGCGCTCGCAGGAGCTCACTTTTGTAGCTGCAAGGCGTTCCCAAGAGCTCACGATTGGATCCTCTCGATTGTCTGACATCGTTTCCGAGACTGCTAAACGCTCCAAGGAATTCGCTACTGAGGCCTCGAAGCGAGCTGATCAAATCAAAGCGGAAGCTGTTAAGCGAGCCGATCTTATCAAGCACTTGGTCGAGGGGACTCCGCCGTCTGGCTCCCTCGAGAAGAACGCTTCCGACGAAGAGGCGCGGGAGGAGGATTTGCAGAGGTTTGGGATAAACGAAGAGCTGAGGGACTTCGTCAAAGGCATCACTATGAGTACATTTCGGGATTTTCCACTCGAAGATGATTCACAAATGTCCAATGTCCCCACAGTCTCAAATATTAGTCAGGATCTAACTGAGTGGCAGGCGAAGCATGCAAGCCTTGTTCTTTCAACTGTCAAGGAAATTTCTAAGTTACGTTATGAATTATGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGCTGGTGAACAGACACATTGCACCCTATGAGAAAAAGTACATGGAGGATGTCATACTGAAATCAGATAAACAAGCTGAAGATGGAAAAATGGAACCTGTTAAAGCTGAAATAACATCTACATCTCAGGAGAAGAAAAATGTTCCAACCTCCTCATCAAGTGACCAAGACTTGGATGTTTTTCTTCTTGGGGATCTTGGAGACAGCGATGAAGGTCCAGGTATGGTGCCACAATTTGTTGATGTCTGCTTTTTATTAGCAATGTGCGGAGCATATGCACAGTCCATTTATATAATTGCTGTTAATGTCATTTTGGCATTTGAGGTTGGTGCCGCTGATCTTCTTCCTGGTTTTTCAGATGATGGGGATGAGGGCTTTGATGATGATTTTGACAAAATGGTTGACAGTTCGGATCCCCTTCTAGAGATTTCAACCATTGTGCAAATTTTGAGAAATGTTTTCTGA MDFWNKARSFAEEAAKRSQELTFVAARRSQELTIGSSRLSDIVSETAKRSKEFATEASKRADQIKAEAVKRADLIKHLVEGTPPSGSLEKNASDEEAREEDLQRFGINEELRDFVKGITMSTFRDFPLEDDSQMSNVPTVSNISQDLTEWQAKHASLVLSTVKEISKLRYELCPRIMKERKFWRIYFLLVNRHIAPYEKKYMEDVILKSDKQAEDGKMEPVKAEITSTSQEKKNVPTSSSSDQDLDVFLLGDLGDSDEGPGMVPQFVDVCFLLAMCGAYAQSIYIIAVNVILAFEVGAADLLPGFSDDGDEGFDDDFDKMVDSSDPLLEISTIVQILRNVF Homology
BLAST of ClCG06G015400 vs. NCBI nr
Match: XP_038879849.1 (uncharacterized protein LOC120071581 isoform X2 [Benincasa hispida]) HSP 1 Score: 477.2 bits (1227), Expect = 1.1e-130 Identity = 264/325 (81.23%), Postives = 269/325 (82.77%), Query Frame = 0
BLAST of ClCG06G015400 vs. NCBI nr
Match: XP_038879848.1 (uncharacterized protein LOC120071581 isoform X1 [Benincasa hispida]) HSP 1 Score: 477.2 bits (1227), Expect = 1.1e-130 Identity = 264/325 (81.23%), Postives = 269/325 (82.77%), Query Frame = 0
BLAST of ClCG06G015400 vs. NCBI nr
Match: KAA0058019.1 (BSD domain-containing protein, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 471.1 bits (1211), Expect = 8.2e-129 Identity = 263/329 (79.94%), Postives = 269/329 (81.76%), Query Frame = 0
BLAST of ClCG06G015400 vs. NCBI nr
Match: XP_008453319.1 (PREDICTED: uncharacterized protein LOC103494072 [Cucumis melo]) HSP 1 Score: 470.3 bits (1209), Expect = 1.4e-128 Identity = 262/326 (80.37%), Postives = 267/326 (81.90%), Query Frame = 0
BLAST of ClCG06G015400 vs. NCBI nr
Match: TYJ98242.1 (BSD domain-containing protein, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 466.5 bits (1199), Expect = 2.0e-127 Identity = 260/325 (80.00%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of ClCG06G015400 vs. ExPASy TrEMBL
Match: A0A5A7UWY1 (BSD domain-containing protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003240 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 4.0e-129 Identity = 263/329 (79.94%), Postives = 269/329 (81.76%), Query Frame = 0
BLAST of ClCG06G015400 vs. ExPASy TrEMBL
Match: A0A1S3BVY4 (uncharacterized protein LOC103494072 OS=Cucumis melo OX=3656 GN=LOC103494072 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 6.8e-129 Identity = 262/326 (80.37%), Postives = 267/326 (81.90%), Query Frame = 0
BLAST of ClCG06G015400 vs. ExPASy TrEMBL
Match: A0A5D3BET4 (BSD domain-containing protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00140 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 9.8e-128 Identity = 260/325 (80.00%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of ClCG06G015400 vs. ExPASy TrEMBL
Match: A0A0A0LPE8 (BSD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015590 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 9.2e-126 Identity = 260/340 (76.47%), Postives = 265/340 (77.94%), Query Frame = 0
BLAST of ClCG06G015400 vs. ExPASy TrEMBL
Match: A0A6J1EJP3 (uncharacterized protein LOC111435105 OS=Cucurbita moschata OX=3662 GN=LOC111435105 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 3.3e-123 Identity = 258/351 (73.50%), Postives = 267/351 (76.07%), Query Frame = 0
BLAST of ClCG06G015400 vs. TAIR 10
Match: AT1G69030.1 (BSD domain-containing protein ) HSP 1 Score: 229.6 bits (584), Expect = 3.9e-60 Identity = 137/286 (47.90%), Postives = 195/286 (68.18%), Query Frame = 0
BLAST of ClCG06G015400 vs. TAIR 10
Match: AT1G26300.1 (BSD domain-containing protein ) HSP 1 Score: 222.6 bits (566), Expect = 4.7e-58 Identity = 134/282 (47.52%), Postives = 191/282 (67.73%), Query Frame = 0
BLAST of ClCG06G015400 vs. TAIR 10
Match: AT1G26300.2 (BSD domain-containing protein ) HSP 1 Score: 175.6 bits (444), Expect = 6.6e-44 Identity = 102/214 (47.66%), Postives = 149/214 (69.63%), Query Frame = 0
BLAST of ClCG06G015400 vs. TAIR 10
Match: AT3G24820.1 (BSD domain-containing protein ) HSP 1 Score: 97.4 bits (241), Expect = 2.3e-20 Identity = 63/169 (37.28%), Postives = 97/169 (57.40%), Query Frame = 0
BLAST of ClCG06G015400 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein ) HSP 1 Score: 56.6 bits (135), Expect = 4.5e-08 Identity = 47/153 (30.72%), Postives = 71/153 (46.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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