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ClCG06G014810 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTTCCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGGTCTCTCCTCTTCCTCTCTCTGTTTCTGTTGGCTGTCTTTTTGTTTTAAGAACATTTACTGGTGGAAATCTTTCTGGGTTTTGAGTTTCTGCTTTTCTGGGAGAATTTTATGCTCCTTTTTGAGTTTACAATCGTGGGTCTAATTGGTAGTGGAGGATAATAGACTCGAGAGTATGATTCGAATGTTAATTCAACAAGGATTGATGGAGAATATGTTTTTATTTTCTACCCATTTTTTGTTTTTCCTCAATTTTGAGCTCGCGAACTGTTATCCGGTTGTTGTTTTTTGTTGCTGGAGGGGAGGGGCCCTCTTTGAGCTTGTGTTGTGGATATCCACGTCTTTCTCAAATTTGTTAAGAGAGAAAAGGAAAAGGAACTCTTGATTTACACGTAAAGAGAGTTTAAATTGGCTTTTCTTCTGTGCTGATCTTTCTTTCCACTTGGCTGAAAATTTTGAGTTGCCTGAAAGGTGTTTGTTTGTTTGTCTGTTTGTTTTAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTACCAAGACATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGGTTCGTTAATCCCAATTTAATCTTCTTTTTGCTAGAATCTAGAACTTTCTTCTTTCAATTATGTAGATTTGAACTTGAATCTCGTTGAATTAACTTCTGATATGTGAATATGCTTGCTTGCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTTGATATGATCCTCACCAAGGTTCTTAATTACCATCTCTCTCGCTCACTAAGCTCTTTGTTGTTTATCTTGATTGATTACTTATTTCCCTTGTGTATGAGATTGATGAGCTACCACTACCAACAATCTTATAAATGTGGGTTATACTTATGTTTATATTATAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTTCCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTTGATATGATCCTCACCAAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG ATGAATAGTGAACTCAAACTCTCCTGCAACTCCTCTTTCTCCATTTCTCTTCAAATCCTTCTCTCTCTAAACCACGGAAGCTTGACTTCTCTGCTTCTCTCCACTTGTTTCCTTCTCTCTTTCTCTCCTTTTTCCTCCTTCAAACCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGATCTTTAGAGTTGTAAGGAGGAATATCAGAGAGAATGAACAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCATCAGCCACTCCAAGACAGGAAATTCAAGAGCAGGAGCTGAGTTTCTTGATATGATCCTCACCAAGGAAAGTTATGGCGAAAATTTTAGCCACCAATTAGCAACATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGCAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGCACCCGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG MNSELKLSCNSSFSISLQILLSLNHGSLTSLLLSTCFLLSFSPFSSFKPSFLRRSSPFQIFRVVRRNIRENEQPRRLVLQTPPDNDPIRAYRWPISHSKTGNSRAGAEFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNIYQLCEGPPSPSTRKGGCTRTKFGHRPAAVRIEGFDCLNHDARNCSISAVA Homology
BLAST of ClCG06G014810 vs. NCBI nr
Match: XP_038878157.1 (uncharacterized protein LOC120070307 [Benincasa hispida]) HSP 1 Score: 281.2 bits (718), Expect = 7.3e-72 Identity = 130/136 (95.59%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of ClCG06G014810 vs. NCBI nr
Match: XP_008453392.1 (PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo] >KAA0058074.1 uncharacterized protein E6C27_scaffold274G003810 [Cucumis melo var. makuwa] >TYK28426.1 uncharacterized protein E5676_scaffold629G00560 [Cucumis melo var. makuwa]) HSP 1 Score: 266.5 bits (680), Expect = 1.9e-67 Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0
BLAST of ClCG06G014810 vs. NCBI nr
Match: XP_004138242.1 (uncharacterized protein LOC101219468 [Cucumis sativus] >KGN63819.1 hypothetical protein Csa_013662 [Cucumis sativus]) HSP 1 Score: 265.0 bits (676), Expect = 5.4e-67 Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0
BLAST of ClCG06G014810 vs. NCBI nr
Match: KAG7023234.1 (hypothetical protein SDJN02_14259 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 257.7 bits (657), Expect = 8.7e-65 Identity = 119/136 (87.50%), Postives = 125/136 (91.91%), Query Frame = 0
BLAST of ClCG06G014810 vs. NCBI nr
Match: XP_023516751.1 (uncharacterized protein LOC111780556 [Cucurbita pepo subsp. pepo] >KAG6589547.1 hypothetical protein SDJN03_14970, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 257.7 bits (657), Expect = 8.7e-65 Identity = 119/136 (87.50%), Postives = 125/136 (91.91%), Query Frame = 0
BLAST of ClCG06G014810 vs. ExPASy TrEMBL
Match: A0A5A7USD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00560 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 9.1e-68 Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0
BLAST of ClCG06G014810 vs. ExPASy TrEMBL
Match: A0A1S3BVK5 (uncharacterized protein LOC103494124 OS=Cucumis melo OX=3656 GN=LOC103494124 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 9.1e-68 Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0
BLAST of ClCG06G014810 vs. ExPASy TrEMBL
Match: A0A0A0LS24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023070 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.6e-67 Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0
BLAST of ClCG06G014810 vs. ExPASy TrEMBL
Match: A0A6J1C2G9 (uncharacterized protein LOC111006835 OS=Momordica charantia OX=3673 GN=LOC111006835 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 7.2e-65 Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 0
BLAST of ClCG06G014810 vs. ExPASy TrEMBL
Match: A0A6J1JA55 (uncharacterized protein LOC111484938 OS=Cucurbita maxima OX=3661 GN=LOC111484938 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 2.1e-64 Identity = 117/136 (86.03%), Postives = 125/136 (91.91%), Query Frame = 0
BLAST of ClCG06G014810 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21 Identity = 62/130 (47.69%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of ClCG06G014810 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20 Identity = 67/150 (44.67%), Postives = 90/150 (60.00%), Query Frame = 0
BLAST of ClCG06G014810 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18 Identity = 79/223 (35.43%), Postives = 112/223 (50.22%), Query Frame = 0
BLAST of ClCG06G014810 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13 Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 0
BLAST of ClCG06G014810 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13 Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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