ClCG06G014565 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAAAAACTCATCAAACCAAAGACAATCACAAGACCAACTCTTCTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCTTTCAAACGCCATCTTGACTCTGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTATCCTCCGATGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCGATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGATTTGA ATGGAAAAAAAAACTCATCAAACCAAAGACAATCACAAGACCAACTCTTCTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCTTTCAAACGCCATCTTGACTCTGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTATCCTCCGATGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCGATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGATTTGA ATGGAAAAAAAAACTCATCAAACCAAAGACAATCACAAGACCAACTCTTCTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCTTTCAAACGCCATCTTGACTCTGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTATCCTCCGATGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCGATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGATTTGA MEKKTHQTKDNHKTNSSLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNASIFRAQDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNSLGISCVI Homology
BLAST of ClCG06G014565 vs. NCBI nr
Match: XP_011654341.1 (uncharacterized protein LOC105435347 [Cucumis sativus] >KGN53393.1 hypothetical protein Csa_014478 [Cucumis sativus]) HSP 1 Score: 272.3 bits (695), Expect = 2.8e-69 Identity = 144/176 (81.82%), Postives = 151/176 (85.80%), Query Frame = 0
BLAST of ClCG06G014565 vs. NCBI nr
Match: XP_008451959.1 (PREDICTED: uncharacterized protein LOC103493107 [Cucumis melo] >KAA0044891.1 putative inactive serine/threonine-protein kinase slob1 isoform X1 [Cucumis melo var. makuwa] >TYK16580.1 putative inactive serine/threonine-protein kinase slob1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 263.8 bits (673), Expect = 1.0e-66 Identity = 142/176 (80.68%), Postives = 148/176 (84.09%), Query Frame = 0
BLAST of ClCG06G014565 vs. NCBI nr
Match: XP_022942039.1 (uncharacterized protein LOC111447227 [Cucurbita moschata]) HSP 1 Score: 233.0 bits (593), Expect = 1.9e-57 Identity = 131/170 (77.06%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of ClCG06G014565 vs. NCBI nr
Match: KAG7031166.1 (hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 233.0 bits (593), Expect = 1.9e-57 Identity = 131/170 (77.06%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of ClCG06G014565 vs. NCBI nr
Match: KAG6600527.1 (hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 232.3 bits (591), Expect = 3.2e-57 Identity = 130/170 (76.47%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of ClCG06G014565 vs. ExPASy TrEMBL
Match: A0A0A0KV10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051450 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69 Identity = 144/176 (81.82%), Postives = 151/176 (85.80%), Query Frame = 0
BLAST of ClCG06G014565 vs. ExPASy TrEMBL
Match: A0A5D3CYZ1 (Putative inactive serine/threonine-protein kinase slob1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004020 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.9e-67 Identity = 142/176 (80.68%), Postives = 148/176 (84.09%), Query Frame = 0
BLAST of ClCG06G014565 vs. ExPASy TrEMBL
Match: A0A1S3BTI3 (uncharacterized protein LOC103493107 OS=Cucumis melo OX=3656 GN=LOC103493107 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.9e-67 Identity = 142/176 (80.68%), Postives = 148/176 (84.09%), Query Frame = 0
BLAST of ClCG06G014565 vs. ExPASy TrEMBL
Match: A0A6J1FQ62 (uncharacterized protein LOC111447227 OS=Cucurbita moschata OX=3662 GN=LOC111447227 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 9.2e-58 Identity = 131/170 (77.06%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of ClCG06G014565 vs. ExPASy TrEMBL
Match: A0A6J1JF52 (uncharacterized protein LOC111486340 OS=Cucurbita maxima OX=3661 GN=LOC111486340 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.5e-55 Identity = 128/170 (75.29%), Postives = 132/170 (77.65%), Query Frame = 0
BLAST of ClCG06G014565 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). ) HSP 1 Score: 117.9 bits (294), Expect = 8.3e-27 Identity = 86/195 (44.10%), Postives = 116/195 (59.49%), Query Frame = 0
BLAST of ClCG06G014565 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). ) HSP 1 Score: 117.9 bits (294), Expect = 8.3e-27 Identity = 86/195 (44.10%), Postives = 116/195 (59.49%), Query Frame = 0
BLAST of ClCG06G014565 vs. TAIR 10
Match: AT1G64340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 71/160 (44.38%), Postives = 91/160 (56.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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