![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
ClCG06G014350 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGACGTTGGGTTACGATGACAATGGCGGAGAATTTTGCTTCTCTGAGGCCTTTAATGGCGGTCGCAAGCTTCGACCTCTCGTCCCTCGCCCTTTGCCTTCCTTTCATGCCAATGGCGCTAACTTCTCTTCTCAATATTACCATCTTGGTATGCATTCTCTTTTAATCTTGTATATTGAGAATATAATATCTTAATATATGTTAATTAAGCTATGTTTGTAGGGTTGATATTTAAATATATTTATAATTTTTTATTAAGTCAGTAAAGTCTAAAACATCCTAAGTGGAGAAAGAATTTATATAATAGTATTTGGGGCAATCATTAGAATAGATAGGTTTAATCTTGCAATGATTAGTAAAAAGAAAAAGATATCAATGATTATTAGTGTAGATAGATTGTGACCAAATATTAGTAGGGTTTGAAGGGTCATTGGAATTTAAGCTATTGAGGTCGGTGGTAATTTTAATTTAATTAATTATTAATTATTATTATTTTATTGAGTTATTGTAGGTAATCATTTGAATGAGGATAACAAGAGAGGGTTGTTGAATAATGGAAAGAGTTGGTCGGGTCCAACACCAGTAGTAGTGAGCTCATCAAGATGGAATCCAACGGCGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGAGGGACACGAACGCCGTCCGCCGACCAAATCCAACACATCACCGCCCAGCTCCGCCGCTACGGCAAAATAGAAGGCAAAAACGTTTTCTATTGGTTTCAAAATCACAAGGCTAGAGAGCGCCAAAAACGACGCCGTCAAACTGCCGCTGAACAAACCAAATATTCTGGTAAACAAATTTAACGCCACACCCAAAAACATAAATAAATAAATAAATAAATAAAAATTCTTACCCTTTTCGTTTCTATATTTTATAGAAATCACTTTAGTCAATTTTTTGAACTGAATCGTTCAAAATAAATTTTGATGTTATAAAAATTGGATTTAAAAGTATAAAATTAAAAATTAAATTAAATTTAAGTGATTTAAAGTGTATTTTCTTTTTCTTTTTCATTTTTACTATAAATGTTTTATTATATTTAACTAATTTTAATTAAAAAAAATTAATTTTAAGAGATTAAAATTAAAATTTATAGAACATACGGAAACAAAAGTTAGAAAATTGAAATTACAAACACTAAAATTTAACAAATTTTAAAGGATAAGAATCAAAATGATATTTTTAACGTTTTCTTTTTTAAAAAAAAATTATTTTGTCTCTTTATTTTATTTTTCTTCTTATTCTAATTGTCGTTTAAAAAAAAAAAAAAGAAAAAGAAAAAAGAGGTTGAATTCTTTTTGTCTTGGATTACATGAACACAGAGGCAGAAAAAGGGTACGAAATTGAAGAGACAAAGACGAAGTGTAGGTGGGGAAGGGCAACACCTCCATCCTCTATAATCTCCTCTACTCTACTTTCAAAGGTCTCTTTCTTTCTCTCTCTCTCTCCCCTTTCTCTCTCCTATTTTACATTCAAAACACCCATTTTCAAATCAAAATCAAATTAACCCATTTTCTATTTTTTAAAACCCACATCAAAATTTTTAACTTTTAGCGGAAAAAAAAAAGTTAAATTCTAGTAAAATTATCTTAAATGGCAAAATCGCTGAAAATATTTACAACTAATAGCGAAATACACTGTCTATCTGCGATAGATCGCGTTAGACTATTATTTGTGTCTATCGTGACACAGATAATAGTCTAGATCGGAATAAAATTTTGCTATATTTGTAAATATTTTCGTTCCTTTTGCTATATTTAAAAAGATCCATAAATTCTATTTTAAACTCTTTAACAAAAGTTTCATTTTAATTCTTACATTTTGAAATGGAAAGAAAAGAAAGATAGGATTAAGATCATAGTTACTATTTATTTTCGTGATTAAAAGATAATTGTTCTCATCATTAACGACATAATTTGAAGGAAAACTTTTGTATACAATCATGGTTAGCATGGCTCACTTGTAGTCTTCGATATTAATGTCTATTAATTAATTTAAAATAATTTTGAAGTAAAAATTTAAAATTAATTTTCATAATGAGTGAAACTTAATTAATTATAATTATTTTAATAGACTTTAACACTAAAAATAGAAAATGAGTATTTAGAACAATTTTGAAGTTAAAAGTTGAAAATATTGAAATATAAGTACCAAATTGATACAAGACTCAAATTATAAGAATAAAATTGTAACATTTTGACATCGAGATACTAAAATGAAACTAAACTCAAAACTCAAAAGACTAAAACGATAACATTTTAAAATCTAAGCGTCAAATAAAAATTAAACTCAAAATTTATGGACAAAAAATTAATTTTTCCTTTATTAAATTTAGAAAACAATGAATCTATAGTGACCACCTACTTAGGAATTAATATCCTATGAGTTTCTTTGAAGCTCGAATATTGTATGGTCAAACTAGTTGTCTTACGAAATTAGTTTAAGTGAACCTAAGTTGGTGAAGATAATTAGTGATAGATATTAAAAAGAAAAAGACAAATTAGAAAACAAAAAGTTAGTTTAATTTTGGTGTGTGGGAGAATGGAAAATGGATTTGTTGGGAAATGAAAAAGGAGGTCCCAAAAGCTGGTGCATTTCTTGCCTTAGTGTAAGGGATGAGAAATGTTTGGGGTTTGTGCTGTCTTACACTTACCCTATTTTACTCACAAATGACAATATATCCTTCTCATTTTTTATGTTCCATACAAATAAATAAATAAAGTTTTACAAACTTTTCTGACATTCACATCTCCAATCCTATTTTCCATTTCTAAACAGTTTAAAATTGATTTTAAAATTGTTATAATCAATTTCCATTTTGTCTTGTACAAAATTACTCTTACACATGCATTTGTTCGTGTCTTCAATATAAAACCATACATTTAAATGATTTTGAATTGTTAAATACAAGTTTAATAAACATGCTTTAAATTTCAAATAAATGTTTTTACGATATGTGTTTTCCTTGCATGTTGGTTAGTAGGATATCTAACTGTCTCATGTGGTGTATTTTTCTTGCTATATTTCTATTCGTTTAATAGATAAGTGGATTTCACTAATATTTTTTAGTCACTGCAAATGCACCATTTAGAAAGTCACGCGAATATTCTACTGACTAACAAAAGTGTAGGCAAGTTTCTTCCTCTTTAGATGGGATATAATCCATCCACTTAAACTTTTGAGTTGATTATTAATTAACTTATTTCTTTTTCAATTAATGTAGGTTTTCACTTATAGACACTCATAACATTATATTATATTTGCAAATATTTTGGCTCATTTTCTTATATTGTATTAGGTTGAGTTTTTGATATATTAAACCTAAATTATATAATGTTTTTTTTTTTTGTTTTTTTTTTTTATCTTTAAGTTAAGGGATTATAGTTTTTGAAATGTCTTGAAAACTAGTTCGAAAACCATATAAAGTATTTTAATTTAATAAAATATAACAAAGAATGACACATTATATTAAAGAATGATATCAAAACATTTATATATTAACTGATTGATAGACAAATGAAAGCAGAATCTTGTCCCATGCAGGAATGGGCAGAAACACAGAGAAAAACAAAAGTAGTTGAATTGGAAGAAGAAGAAGAAGAAGAAACAAGAAGAGAGTCAGTGGAAAGAGAAGAGACATGGAATTACAATAATATATTGAATTGTCAACTCATAAACCCTACAAGGAAGACCCAACATCTAAACAGTACCATCGAATCCAGCAATGGAGACCGACGACACAATGTCGTTGACAACAACAATGACGACGAGGAATCTAAAATGATGACACTTCAGTTGTTTCCACTCCGTAGCACAAAGTTTTACAAATACGACAGCGAGAGAGAGGGACGACGAGATGACCAACCCGAGATCACGTCGGATTCAGACATGATCAAAAGCTCCTCCTTGTCTCCAAATTGTAGTTTCCAGTTCTTTGAGTTTCTTCCACTCAAAAACTAA ATGTGGACGTTGGGTTACGATGACAATGGCGGAGAATTTTGCTTCTCTGAGGCCTTTAATGGCGGTCGCAAGCTTCGACCTCTCGTCCCTCGCCCTTTGCCTTCCTTTCATGCCAATGGCGCTAACTTCTCTTCTCAATATTACCATCTTGGTAATCATTTGAATGAGGATAACAAGAGAGGGTTGTTGAATAATGGAAAGAGTTGGTCGGGTCCAACACCAGTAGTAGTGAGCTCATCAAGATGGAATCCAACGGCGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGAGGGACACGAACGCCGTCCGCCGACCAAATCCAACACATCACCGCCCAGCTCCGCCGCTACGGCAAAATAGAAGGCAAAAACGTTTTCTATTGGTTTCAAAATCACAAGGCTAGAGAGCGCCAAAAACGACGCCGTCAAACTGCCGCTGAACAAACCAAATATTCTGAGGCAGAAAAAGGGTACGAAATTGAAGAGACAAAGACGAAGTGTAGGTGGGGAAGGGCAACACCTCCATCCTCTATAATCTCCTCTACTCTACTTTCAAAGGAATGGGCAGAAACACAGAGAAAAACAAAAGTAGTTGAATTGGAAGAAGAAGAAGAAGAAGAAACAAGAAGAGAGTCAGTGGAAAGAGAAGAGACATGGAATTACAATAATATATTGAATTGTCAACTCATAAACCCTACAAGGAAGACCCAACATCTAAACAGTACCATCGAATCCAGCAATGGAGACCGACGACACAATGTCGTTGACAACAACAATGACGACGAGGAATCTAAAATGATGACACTTCAGTTGTTTCCACTCCGTAGCACAAAGTTTTACAAATACGACAGCGAGAGAGAGGGACGACGAGATGACCAACCCGAGATCACGTCGGATTCAGACATGATCAAAAGCTCCTCCTTGTCTCCAAATTGTAGTTTCCAGTTCTTTGAGTTTCTTCCACTCAAAAACTAA ATGTGGACGTTGGGTTACGATGACAATGGCGGAGAATTTTGCTTCTCTGAGGCCTTTAATGGCGGTCGCAAGCTTCGACCTCTCGTCCCTCGCCCTTTGCCTTCCTTTCATGCCAATGGCGCTAACTTCTCTTCTCAATATTACCATCTTGGTAATCATTTGAATGAGGATAACAAGAGAGGGTTGTTGAATAATGGAAAGAGTTGGTCGGGTCCAACACCAGTAGTAGTGAGCTCATCAAGATGGAATCCAACGGCGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGAGGGACACGAACGCCGTCCGCCGACCAAATCCAACACATCACCGCCCAGCTCCGCCGCTACGGCAAAATAGAAGGCAAAAACGTTTTCTATTGGTTTCAAAATCACAAGGCTAGAGAGCGCCAAAAACGACGCCGTCAAACTGCCGCTGAACAAACCAAATATTCTGAGGCAGAAAAAGGGTACGAAATTGAAGAGACAAAGACGAAGTGTAGGTGGGGAAGGGCAACACCTCCATCCTCTATAATCTCCTCTACTCTACTTTCAAAGGAATGGGCAGAAACACAGAGAAAAACAAAAGTAGTTGAATTGGAAGAAGAAGAAGAAGAAGAAACAAGAAGAGAGTCAGTGGAAAGAGAAGAGACATGGAATTACAATAATATATTGAATTGTCAACTCATAAACCCTACAAGGAAGACCCAACATCTAAACAGTACCATCGAATCCAGCAATGGAGACCGACGACACAATGTCGTTGACAACAACAATGACGACGAGGAATCTAAAATGATGACACTTCAGTTGTTTCCACTCCGTAGCACAAAGTTTTACAAATACGACAGCGAGAGAGAGGGACGACGAGATGACCAACCCGAGATCACGTCGGATTCAGACATGATCAAAAGCTCCTCCTTGTCTCCAAATTGTAGTTTCCAGTTCTTTGAGTTTCTTCCACTCAAAAACTAA MWTLGYDDNGGEFCFSEAFNGGRKLRPLVPRPLPSFHANGANFSSQYYHLGNHLNEDNKRGLLNNGKSWSGPTPVVVSSSRWNPTAEQLRILEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQTAAEQTKYSEAEKGYEIEETKTKCRWGRATPPSSIISSTLLSKEWAETQRKTKVVELEEEEEEETRRESVEREETWNYNNILNCQLINPTRKTQHLNSTIESSNGDRRHNVVDNNNDDEESKMMTLQLFPLRSTKFYKYDSEREGRRDDQPEITSDSDMIKSSSLSPNCSFQFFEFLPLKN Homology
BLAST of ClCG06G014350 vs. NCBI nr
Match: XP_038878764.1 (WUSCHEL-related homeobox 1 [Benincasa hispida]) HSP 1 Score: 532.7 bits (1371), Expect = 2.2e-147 Identity = 281/330 (85.15%), Postives = 295/330 (89.39%), Query Frame = 0
BLAST of ClCG06G014350 vs. NCBI nr
Match: XP_011649155.1 (WUSCHEL-related homeobox 1 [Cucumis sativus] >KGN63872.1 hypothetical protein Csa_013527 [Cucumis sativus]) HSP 1 Score: 460.7 bits (1184), Expect = 1.1e-125 Identity = 262/343 (76.38%), Postives = 284/343 (82.80%), Query Frame = 0
BLAST of ClCG06G014350 vs. NCBI nr
Match: KAG6587685.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 408.7 bits (1049), Expect = 4.8e-110 Identity = 224/327 (68.50%), Postives = 257/327 (78.59%), Query Frame = 0
BLAST of ClCG06G014350 vs. NCBI nr
Match: XP_023531667.1 (WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-108 Identity = 221/327 (67.58%), Postives = 254/327 (77.68%), Query Frame = 0
BLAST of ClCG06G014350 vs. NCBI nr
Match: XP_022933520.1 (WUSCHEL-related homeobox 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 399.8 bits (1026), Expect = 2.2e-107 Identity = 220/327 (67.28%), Postives = 254/327 (77.68%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 159.1 bits (401), Expect = 8.6e-38 Identity = 146/385 (37.92%), Postives = 188/385 (48.83%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy Swiss-Prot
Match: Q9SB92 (Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 3.5e-23 Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.0e-22 Identity = 63/132 (47.73%), Postives = 83/132 (62.88%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy Swiss-Prot
Match: Q6X7K1 (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.6e-22 Identity = 49/70 (70.00%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy Swiss-Prot
Match: Q6YBV1 (Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.3e-21 Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy TrEMBL
Match: A0A0A0LSV4 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025040 PE=3 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 5.1e-126 Identity = 262/343 (76.38%), Postives = 284/343 (82.80%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy TrEMBL
Match: A0A6J1F538 (WUSCHEL-related homeobox 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440922 PE=3 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 1.1e-107 Identity = 220/327 (67.28%), Postives = 254/327 (77.68%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy TrEMBL
Match: A0A6J1KU86 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497245 PE=3 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 2.0e-106 Identity = 224/330 (67.88%), Postives = 256/330 (77.58%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy TrEMBL
Match: A0A6J1EZA1 (WUSCHEL-related homeobox 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440922 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 2.0e-98 Identity = 209/327 (63.91%), Postives = 240/327 (73.39%), Query Frame = 0
BLAST of ClCG06G014350 vs. ExPASy TrEMBL
Match: A0A6J1BZR8 (WUSCHEL-related homeobox 1 OS=Momordica charantia OX=3673 GN=LOC111006971 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 8.8e-86 Identity = 200/334 (59.88%), Postives = 225/334 (67.37%), Query Frame = 0
BLAST of ClCG06G014350 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 ) HSP 1 Score: 159.1 bits (401), Expect = 6.1e-39 Identity = 146/385 (37.92%), Postives = 188/385 (48.83%), Query Frame = 0
BLAST of ClCG06G014350 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-24 Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of ClCG06G014350 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 ) HSP 1 Score: 107.5 bits (267), Expect = 2.1e-23 Identity = 63/132 (47.73%), Postives = 83/132 (62.88%), Query Frame = 0
BLAST of ClCG06G014350 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 ) HSP 1 Score: 106.3 bits (264), Expect = 4.7e-23 Identity = 49/70 (70.00%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of ClCG06G014350 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-21 Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|