ClCG06G013890 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G013890
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	homeobox-leucine zipper protein HOX18-like
Location	CG_Chr06: 27309972 .. 27312019 (+)
RNA-Seq Expression	ClCG06G013890
Synteny	ClCG06G013890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATCATCAAGATGAGGTATGCAATATCAGCTGGCTTAGCCTTGGTTTGGGATTTGGTGAATATGTCCCAAAAAAGATGCAAAAAATCAACAATAAGCAGCAGCAGCAGCAACAACAACAACTCTCTTTCACTCTCATTCCAAAAGAAGAATTGGGTATTAACAATAACGACGACGACGACGCCAACAACAACATCAATATGGAAATTGACGATGAAGCTAATTCAAGTGAAGAAGATGATCATCATTTGATGAAGAGAATTAGAAGCAATAATAATATTGTTAATTATGATCAAGATTCCTCCTTTGGAATTAGAAGATCATCATCAGATCATCATCATCATCAGTACACCAACAACAACAACAATATTATTACTACTAATCATAATTATAAGGGGATTAGTAGTAGTAGTGGATCAGAATTAAGGGAGAGAAAAAAGCTTAGGCTTTCCAAAGAACAATCCACTTTGCTGGAAGAAAGCTTCAAACTTCACACCACTTTGAATCCGGTAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCTTTTCAATACCCATTTAATCTTTTTTCCTTCTTTTCATTTTTATCAAATACCCATAAATTCTTTTATGAAAAAATTTAATCTTTTTTTTTTCTATTTTTTTTTCCTTTTGCATGGATTTGTAGGCTCAGAAACAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGTATTTTTACAATTCTTTTAACATTATATATCTTCCTATTTGTTTTTTTTTTCCCCTTAAACAAACGGTTTTTAGTTTTCTATTTTTGAAAATTATCCTTTTATTTATTTTATTGCCCTACTTCTTTTAGAATGTTTTTAAATACTGTTATGAATTTAAAGAAAAATAACAATTTATTGTAAAGAAATTGTGAGTTATCATAAAAAAAATGGCGAGAGAAGAACGCAATTTTCAAAAACTTAAGTTTTTTAATAACCGTTTTGTTTTTAATTTTCTATTTTTGAAATTTATGATTGTTTTATCCTAACTTCTTTAACATGAGTTTCATTTTTTTTTTTAAAGAAAATTCTTTAGTAAAATCTAAAAATTTCAAATTTTTAAAATTTTGCTTGATATTTTAAAAAGATTAGTGAAAAGTGGGAAAACAAAAGGTTTTAAATTAAGAGAGGAGATCTTAATTTTGATCTAGAATTGGTAAAATATTTGTCGTTTGATTAATTTGTTACTAAATATGAAAATTTGTTTTTTAACAATGGATGTATATAGAAAGTTAAAAAGTGAAAAATTGACTTGTGGAACAGGACGAAATTGAAACAAACAGAAGTAGATTGTGAGTTTTTGAAGAAATGTTGTGAAAGATTAAACGAAGAAAACCGAAGGTTGAAGAAAGAATTGCATGAATTAAGATCCCTTAAACTTGGAGCTTCACAATTGTACATTCAGCTGCCTAAGGCGGCCACACTCACAATTTGCCCTTCATGCGACAAAATTACAAGGACGGCCGCCGCCAACGCCGCCGCCGTCGACGCTAATTCTCCGCCACAATAA

mRNA sequence

ATGGCAGATCATCAAGATGAGGTATGCAATATCAGCTGGCTTAGCCTTGGTTTGGGATTTGGTGAATATGTCCCAAAAAAGATGCAAAAAATCAACAATAAGCAGCAGCAGCAGCAACAACAACAACTCTCTTTCACTCTCATTCCAAAAGAAGAATTGGGTATTAACAATAACGACGACGACGACGCCAACAACAACATCAATATGGAAATTGACGATGAAGCTAATTCAAGTGAAGAAGATGATCATCATTTGATGAAGAGAATTAGAAGCAATAATAATATTGTTAATTATGATCAAGATTCCTCCTTTGGAATTAGAAGATCATCATCAGATCATCATCATCATCAGTACACCAACAACAACAACAATATTATTACTACTAATCATAATTATAAGGGGATTAGTAGTAGTAGTGGATCAGAATTAAGGGAGAGAAAAAAGCTTAGGCTTTCCAAAGAACAATCCACTTTGCTGGAAGAAAGCTTCAAACTTCACACCACTTTGAATCCGGCTCAGAAACAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGACGAAATTGAAACAAACAGAAGTAGATTGTGAGTTTTTGAAGAAATGTTGTGAAAGATTAAACGAAGAAAACCGAAGGTTGAAGAAAGAATTGCATGAATTAAGATCCCTTAAACTTGGAGCTTCACAATTGTACATTCAGCTGCCTAAGGCGGCCACACTCACAATTTGCCCTTCATGCGACAAAATTACAAGGACGGCCGCCGCCAACGCCGCCGCCGTCGACGCTAATTCTCCGCCACAATAA

Coding sequence (CDS)

ATGGCAGATCATCAAGATGAGGTATGCAATATCAGCTGGCTTAGCCTTGGTTTGGGATTTGGTGAATATGTCCCAAAAAAGATGCAAAAAATCAACAATAAGCAGCAGCAGCAGCAACAACAACAACTCTCTTTCACTCTCATTCCAAAAGAAGAATTGGGTATTAACAATAACGACGACGACGACGCCAACAACAACATCAATATGGAAATTGACGATGAAGCTAATTCAAGTGAAGAAGATGATCATCATTTGATGAAGAGAATTAGAAGCAATAATAATATTGTTAATTATGATCAAGATTCCTCCTTTGGAATTAGAAGATCATCATCAGATCATCATCATCATCAGTACACCAACAACAACAACAATATTATTACTACTAATCATAATTATAAGGGGATTAGTAGTAGTAGTGGATCAGAATTAAGGGAGAGAAAAAAGCTTAGGCTTTCCAAAGAACAATCCACTTTGCTGGAAGAAAGCTTCAAACTTCACACCACTTTGAATCCGGCTCAGAAACAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGACGAAATTGAAACAAACAGAAGTAGATTGTGAGTTTTTGAAGAAATGTTGTGAAAGATTAAACGAAGAAAACCGAAGGTTGAAGAAAGAATTGCATGAATTAAGATCCCTTAAACTTGGAGCTTCACAATTGTACATTCAGCTGCCTAAGGCGGCCACACTCACAATTTGCCCTTCATGCGACAAAATTACAAGGACGGCCGCCGCCAACGCCGCCGCCGTCGACGCTAATTCTCCGCCACAATAA

Protein sequence

MADHQDEVCNISWLSLGLGFGEYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNNDDDDANNNINMEIDDEANSSEEDDHHLMKRIRSNNNIVNYDQDSSFGIRRSSSDHHHHQYTNNNNNIITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAAVDANSPPQ

Homology

[Close]

BLAST of ClCG06G013890 vs. NCBI nr
Match: XP_038879995.1 (homeobox-leucine zipper protein HOX17-like [Benincasa hispida])

HSP 1 Score: 437.2 bits (1123), Expect = 1.1e-118
Identity = 251/285 (88.07%), Postives = 260/285 (91.23%), Query Frame = 0


Query: 1   MADHQDEVCNISWLSLGLGFG--EYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNN 60
           M DHQDEVCNISWLSLGLGFG  +YVPKKMQKINN        QLSFTLIPKEELGINNN
Sbjct: 1   MGDHQDEVCNISWLSLGLGFGDDQYVPKKMQKINN-------NQLSFTLIPKEELGINNN 60

Query: 61  DDDDANNNINMEIDD-EANSSEED-DHHLMKRIRSNNNIVNYD-QDSSFGIR-RSSSDHH 120
           +    N+NINMEIDD EANSSEED  HHLMKR RSNNNIVNYD QDSSFGIR RSSSDHH
Sbjct: 61  N----NSNINMEIDDEEANSSEEDHHHHLMKRSRSNNNIVNYDHQDSSFGIRSRSSSDHH 120

Query: 121 HHQYTNNNNNIITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQK 180
           HHQ  ++NNNIITTNHN+KGISSS  SELRERKKLRLSKEQSTLLEESFKL+TTLNPAQK
Sbjct: 121 HHQ--SSNNNIITTNHNHKGISSSGASELRERKKLRLSKEQSTLLEESFKLNTTLNPAQK 180

Query: 181 QALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRS 240
           QALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHEL+S
Sbjct: 181 QALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELKS 240

Query: 241 LKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAAVDANSPPQ 280
           LKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAA+DANSPPQ
Sbjct: 241 LKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAALDANSPPQ 272

[Close]

BLAST of ClCG06G013890 vs. NCBI nr
Match: XP_008453538.1 (PREDICTED: homeobox-leucine zipper protein HOX18-like [Cucumis melo] >KAA0058190.1 homeobox-leucine zipper protein HOX18-like [Cucumis melo var. makuwa])

HSP 1 Score: 394.0 bits (1011), Expect = 1.0e-105
Identity = 236/285 (82.81%), Postives = 247/285 (86.67%), Query Frame = 0


Query: 4   HQDEVCNISWLSLGLGFG-EYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNNDDDD 63
           H+DE+CNISWLSLGLGFG +YVPKK+QK      Q QQQQ+SFTLIPKEEL I NN+   
Sbjct: 5   HEDEICNISWLSLGLGFGDQYVPKKIQK-----NQHQQQQVSFTLIPKEELEITNNN--- 64

Query: 64  ANNNINMEI-DDEANSSEE-DDHHLMKRIRSNNNIVNYD----QDSSFG-IRRSSSDHHH 123
                NMEI DDE NSSEE DDHHLMKRIRSNNNIVNYD    QDSSFG IRR SSD   
Sbjct: 65  -----NMEIDDDEVNSSEEDDDHHLMKRIRSNNNIVNYDHHHRQDSSFGSIRRLSSD--- 124

Query: 124 HQYTNNNNNIITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ 183
            QY NNN+ + +TNHNYKGI SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ
Sbjct: 125 -QYINNNDIVNSTNHNYKGI-SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ 184

Query: 184 ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSL 243
           ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEL+ELRSL
Sbjct: 185 ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELNELRSL 244

Query: 244 KLGASQLYIQLPKAATLTICPSCDKITRT-AAANAAAVDANSPPQ 280
           KLGASQLYIQLPKAATLTICPSCD+ITRT AA  AAAVDANSPPQ
Sbjct: 245 KLGASQLYIQLPKAATLTICPSCDQITRTPAAVTAAAVDANSPPQ 271

[Close]

BLAST of ClCG06G013890 vs. NCBI nr
Match: XP_004150745.1 (homeobox-leucine zipper protein HOX18 [Cucumis sativus] >KGN65506.1 hypothetical protein Csa_019735 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 4.0e-105
Identity = 235/283 (83.04%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 4   HQDEVCNISWLSLGLGFG-EYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNNDDDD 63
           H+DE+CNISWLSLGLGFG +YVPKK+QK      QQQQQQLSFTLIPKEEL I NN+   
Sbjct: 5   HEDEICNISWLSLGLGFGDQYVPKKIQK-----NQQQQQQLSFTLIPKEELEITNNN--- 64

Query: 64  ANNNINMEI-DDEANSSEE-DDHHLMKRIRSNNNIVNYD---QDSSFG-IRRSSSDHHHH 123
                NMEI DDEANSSEE DDHHLMKRIRS+NNIVNYD   QDSSFG IRR SSDH   
Sbjct: 65  -----NMEIDDDEANSSEEDDDHHLMKRIRSSNNIVNYDHHRQDSSFGSIRRLSSDH--- 124

Query: 124 QYTNNNNNIITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQA 183
            Y NN++ + TTNHNYKGI SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQA
Sbjct: 125 -YINNSDIVNTTNHNYKGI-SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQA 184

Query: 184 LAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLK 243
           LAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEL+ELRSLK
Sbjct: 185 LAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELNELRSLK 244

Query: 244 LGASQLYIQLPKAATLTICPSCDKITRTAAANAAAVDANSPPQ 280
           LGASQLYIQLPKAATLTICPSCDKITRT      AVDANSPPQ
Sbjct: 245 LGASQLYIQLPKAATLTICPSCDKITRT-----PAVDANSPPQ 264

[Close]

BLAST of ClCG06G013890 vs. NCBI nr
Match: KAG6587716.1 (Homeobox-leucine zipper protein HAT4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.1 bits (684), Expect = 8.6e-68
Identity = 171/277 (61.73%), Postives = 180/277 (64.98%), Query Frame = 0


Query: 5   QDEVCNIS-WLSLGLGFGEYVPKKMQKIN-NKQQQQQQQQLSFTLIPKEELGINNNDDDD 64
           QD++CNI   LSLG GFGEYVPKKMQKIN N    +    LSFTL+PK+EL IN++    
Sbjct: 4   QDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSFTDLSFTLVPKQELAINSS---- 63

Query: 65  ANNNINMEIDDEANSSEEDDHHLMKRIRSNNNIVNYDQDSSFGIRRSSSDHHHHQYTNNN 124
                                                                       
Sbjct: 64  ------------------------------------------------------------ 123

Query: 125 NNIITTNHNYKGISSSSGSEL-RERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQL 184
               TTN        S GSE  RERKKLRLSKEQ+TLLEESFKLHTTLNPAQKQALA QL
Sbjct: 124 ---TTTN--------SLGSERERERKKLRLSKEQATLLEESFKLHTTLNPAQKQALAHQL 183

Query: 185 NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQ 244
           NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRS+KLGASQ
Sbjct: 184 NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQ 204

Query: 245 LYIQLPKAATLTICPSCDKITRTAAANAAAVDANSPP 279
           LYIQLPKAATLTICPSCDKITRT AANAAA D NSPP
Sbjct: 244 LYIQLPKAATLTICPSCDKITRTPAANAAA-DPNSPP 204

[Close]

BLAST of ClCG06G013890 vs. NCBI nr
Match: XP_022931479.1 (homeobox-leucine zipper protein HAT3-like [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 2.5e-67
Identity = 170/277 (61.37%), Postives = 180/277 (64.98%), Query Frame = 0


Query: 5   QDEVCNIS-WLSLGLGFGEYVPKKMQKIN-NKQQQQQQQQLSFTLIPKEELGINNNDDDD 64
           QD++CNI   LSLG GFGEYVPKKMQKIN N    +    LSFTL+PK+EL IN++    
Sbjct: 4   QDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSCTDLSFTLVPKQELAINSS---- 63

Query: 65  ANNNINMEIDDEANSSEEDDHHLMKRIRSNNNIVNYDQDSSFGIRRSSSDHHHHQYTNNN 124
                                                                       
Sbjct: 64  ------------------------------------------------------------ 123

Query: 125 NNIITTNHNYKGISSSSGSEL-RERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQL 184
               TTN        S GSE  RERKKLRLSKEQ+TLLEESFKLHTTLNPAQKQALA QL
Sbjct: 124 ---TTTN--------SLGSERERERKKLRLSKEQATLLEESFKLHTTLNPAQKQALAHQL 183

Query: 185 NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQ 244
           NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRS+KLGASQ
Sbjct: 184 NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQ 204

Query: 245 LYIQLPKAATLTICPSCDKITRTAAANAAAVDANSPP 279
           LYIQLPKAATLTICPSCDKITRT AANAAA + NSPP
Sbjct: 244 LYIQLPKAATLTICPSCDKITRTPAANAAA-EPNSPP 204

[Close]

BLAST of ClCG06G013890 vs. ExPASy Swiss-Prot
Match: P46604 (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39
Identity = 85/116 (73.28%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 146 RKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTE 205
           RKKLRL+K+QS LLE++FKLH+TLNP QKQALA+QLNL+ RQVEVWFQNRRARTKLKQTE
Sbjct: 125 RKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTE 184

Query: 206 VDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPSCDKI 262
           VDCEFLKKCCE L +ENRRL+KEL +L++LKL +   Y+ +P AATLT+CPSC+++
Sbjct: 185 VDCEFLKKCCETLTDENRRLQKELQDLKALKL-SQPFYMHMP-AATLTMCPSCERL 238

[Close]

BLAST of ClCG06G013890 vs. ExPASy Swiss-Prot
Match: P46602 (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 8.7e-39
Identity = 87/143 (60.84%), Postives = 116/143 (81.12%), Query Frame = 0


Query: 138 SSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRA 197
           S   +   RKKLRLSKEQ+ +LEE+FK H+TLNP QK ALA+QLNL+TRQVEVWFQNRRA
Sbjct: 153 SGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRA 212

Query: 198 RTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPS 257
           RTKLKQTEVDCE+LK+CCE L +ENRRL+KE+ ELR+LKL +  LY+ +    TLT+CPS
Sbjct: 213 RTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKL-SPHLYMHMKPPTTLTMCPS 272

Query: 258 CDKITRTAAANAAA---VDANSP 278
           C+++  T+++++ A   ++++SP
Sbjct: 273 CERVAVTSSSSSVAPPVMNSSSP 294

[Close]

BLAST of ClCG06G013890 vs. ExPASy Swiss-Prot
Match: P92953 (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana OX=3702 GN=ATHB-4 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-38
Identity = 85/133 (63.91%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 146 RKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTE 205
           RKKLRLSK+Q+ +LEE+FK H+TLNP QK ALA+QLNL+ RQVEVWFQNRRARTKLKQTE
Sbjct: 162 RKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTE 221

Query: 206 VDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPSCDKITRTA 265
           VDCE+LK+CC+ L EENRRL+KE+ ELR+LKL +  LY+ +    TLT+CPSC++++ +A
Sbjct: 222 VDCEYLKRCCDNLTEENRRLQKEVSELRALKL-SPHLYMHMTPPTTLTMCPSCERVSSSA 281

Query: 266 AANAAAVDANSPP 279
           A   AA    + P
Sbjct: 282 ATVTAAPSTTTTP 293

[Close]

BLAST of ClCG06G013890 vs. ExPASy Swiss-Prot
Match: Q01I23 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=HOX17 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.3e-38
Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 123 NNIITTNHNYKGISSSSGSELRE--------RKKLRLSKEQSTLLEESFKLHTTLNPAQK 182
           + ++       G+    GS+  +        RKKLRLSK+QS +LE+SF+ H TLNP QK
Sbjct: 50  SEVVAAEEERAGLRGGGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQK 109

Query: 183 QALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRS 242
             LAQQL L+ RQVEVWFQNRRARTKLKQTEVDCEFLK+CCE L EENRRL+KE+ ELR+
Sbjct: 110 ATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRA 169

Query: 243 LKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAAVDAN 276
           LKL +  LY+ +    TLT+CPSC++++ T   ++AA  A+
Sbjct: 170 LKLVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSAAAAAD 210

[Close]

BLAST of ClCG06G013890 vs. ExPASy Swiss-Prot
Match: Q0JB92 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX17 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.3e-38
Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 123 NNIITTNHNYKGISSSSGSELRE--------RKKLRLSKEQSTLLEESFKLHTTLNPAQK 182
           + ++       G+    GS+  +        RKKLRLSK+QS +LE+SF+ H TLNP QK
Sbjct: 50  SEVVAAEEERAGLRGGGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQK 109

Query: 183 QALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRS 242
             LAQQL L+ RQVEVWFQNRRARTKLKQTEVDCEFLK+CCE L EENRRL+KE+ ELR+
Sbjct: 110 ATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRA 169

Query: 243 LKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAAVDAN 276
           LKL +  LY+ +    TLT+CPSC++++ T   ++AA  A+
Sbjct: 170 LKLVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSAAAAAD 210

[Close]

BLAST of ClCG06G013890 vs. ExPASy TrEMBL
Match: A0A5A7USQ4 (Homeobox-leucine zipper protein HOX18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005100 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 5.0e-106
Identity = 236/285 (82.81%), Postives = 247/285 (86.67%), Query Frame = 0


Query: 4   HQDEVCNISWLSLGLGFG-EYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNNDDDD 63
           H+DE+CNISWLSLGLGFG +YVPKK+QK      Q QQQQ+SFTLIPKEEL I NN+   
Sbjct: 5   HEDEICNISWLSLGLGFGDQYVPKKIQK-----NQHQQQQVSFTLIPKEELEITNNN--- 64

Query: 64  ANNNINMEI-DDEANSSEE-DDHHLMKRIRSNNNIVNYD----QDSSFG-IRRSSSDHHH 123
                NMEI DDE NSSEE DDHHLMKRIRSNNNIVNYD    QDSSFG IRR SSD   
Sbjct: 65  -----NMEIDDDEVNSSEEDDDHHLMKRIRSNNNIVNYDHHHRQDSSFGSIRRLSSD--- 124

Query: 124 HQYTNNNNNIITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ 183
            QY NNN+ + +TNHNYKGI SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ
Sbjct: 125 -QYINNNDIVNSTNHNYKGI-SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ 184

Query: 184 ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSL 243
           ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEL+ELRSL
Sbjct: 185 ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELNELRSL 244

Query: 244 KLGASQLYIQLPKAATLTICPSCDKITRT-AAANAAAVDANSPPQ 280
           KLGASQLYIQLPKAATLTICPSCD+ITRT AA  AAAVDANSPPQ
Sbjct: 245 KLGASQLYIQLPKAATLTICPSCDQITRTPAAVTAAAVDANSPPQ 271

[Close]

BLAST of ClCG06G013890 vs. ExPASy TrEMBL
Match: A0A1S3BWH2 (homeobox-leucine zipper protein HOX18-like OS=Cucumis melo OX=3656 GN=LOC103494220 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 5.0e-106
Identity = 236/285 (82.81%), Postives = 247/285 (86.67%), Query Frame = 0


Query: 4   HQDEVCNISWLSLGLGFG-EYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNNDDDD 63
           H+DE+CNISWLSLGLGFG +YVPKK+QK      Q QQQQ+SFTLIPKEEL I NN+   
Sbjct: 5   HEDEICNISWLSLGLGFGDQYVPKKIQK-----NQHQQQQVSFTLIPKEELEITNNN--- 64

Query: 64  ANNNINMEI-DDEANSSEE-DDHHLMKRIRSNNNIVNYD----QDSSFG-IRRSSSDHHH 123
                NMEI DDE NSSEE DDHHLMKRIRSNNNIVNYD    QDSSFG IRR SSD   
Sbjct: 65  -----NMEIDDDEVNSSEEDDDHHLMKRIRSNNNIVNYDHHHRQDSSFGSIRRLSSD--- 124

Query: 124 HQYTNNNNNIITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ 183
            QY NNN+ + +TNHNYKGI SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ
Sbjct: 125 -QYINNNDIVNSTNHNYKGI-SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQ 184

Query: 184 ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSL 243
           ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEL+ELRSL
Sbjct: 185 ALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELNELRSL 244

Query: 244 KLGASQLYIQLPKAATLTICPSCDKITRT-AAANAAAVDANSPPQ 280
           KLGASQLYIQLPKAATLTICPSCD+ITRT AA  AAAVDANSPPQ
Sbjct: 245 KLGASQLYIQLPKAATLTICPSCDQITRTPAAVTAAAVDANSPPQ 271

[Close]

BLAST of ClCG06G013890 vs. ExPASy TrEMBL
Match: A0A0A0M012 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G433050 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.9e-105
Identity = 235/283 (83.04%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 4   HQDEVCNISWLSLGLGFG-EYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNNDDDD 63
           H+DE+CNISWLSLGLGFG +YVPKK+QK      QQQQQQLSFTLIPKEEL I NN+   
Sbjct: 5   HEDEICNISWLSLGLGFGDQYVPKKIQK-----NQQQQQQLSFTLIPKEELEITNNN--- 64

Query: 64  ANNNINMEI-DDEANSSEE-DDHHLMKRIRSNNNIVNYD---QDSSFG-IRRSSSDHHHH 123
                NMEI DDEANSSEE DDHHLMKRIRS+NNIVNYD   QDSSFG IRR SSDH   
Sbjct: 65  -----NMEIDDDEANSSEEDDDHHLMKRIRSSNNIVNYDHHRQDSSFGSIRRLSSDH--- 124

Query: 124 QYTNNNNNIITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQA 183
            Y NN++ + TTNHNYKGI SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQA
Sbjct: 125 -YINNSDIVNTTNHNYKGI-SSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQA 184

Query: 184 LAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLK 243
           LAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEL+ELRSLK
Sbjct: 185 LAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELNELRSLK 244

Query: 244 LGASQLYIQLPKAATLTICPSCDKITRTAAANAAAVDANSPPQ 280
           LGASQLYIQLPKAATLTICPSCDKITRT      AVDANSPPQ
Sbjct: 245 LGASQLYIQLPKAATLTICPSCDKITRT-----PAVDANSPPQ 264

[Close]

BLAST of ClCG06G013890 vs. ExPASy TrEMBL
Match: A0A6J1EUD1 (homeobox-leucine zipper protein HAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111437643 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 170/277 (61.37%), Postives = 180/277 (64.98%), Query Frame = 0


Query: 5   QDEVCNIS-WLSLGLGFGEYVPKKMQKIN-NKQQQQQQQQLSFTLIPKEELGINNNDDDD 64
           QD++CNI   LSLG GFGEYVPKKMQKIN N    +    LSFTL+PK+EL IN++    
Sbjct: 4   QDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSCTDLSFTLVPKQELAINSS---- 63

Query: 65  ANNNINMEIDDEANSSEEDDHHLMKRIRSNNNIVNYDQDSSFGIRRSSSDHHHHQYTNNN 124
                                                                       
Sbjct: 64  ------------------------------------------------------------ 123

Query: 125 NNIITTNHNYKGISSSSGSEL-RERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQL 184
               TTN        S GSE  RERKKLRLSKEQ+TLLEESFKLHTTLNPAQKQALA QL
Sbjct: 124 ---TTTN--------SLGSERERERKKLRLSKEQATLLEESFKLHTTLNPAQKQALAHQL 183

Query: 185 NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQ 244
           NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRS+KLGASQ
Sbjct: 184 NLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQ 204

Query: 245 LYIQLPKAATLTICPSCDKITRTAAANAAAVDANSPP 279
           LYIQLPKAATLTICPSCDKITRT AANAAA + NSPP
Sbjct: 244 LYIQLPKAATLTICPSCDKITRTPAANAAA-EPNSPP 204

[Close]

BLAST of ClCG06G013890 vs. ExPASy TrEMBL
Match: A0A6J1BYS3 (homeobox-leucine zipper protein HAT22-like OS=Momordica charantia OX=3673 GN=LOC111006976 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 180/267 (67.42%), Postives = 191/267 (71.54%), Query Frame = 0


Query: 6   DEVCNISWLSLGLGFG-EYVPKKMQKINNKQQQQQQQQLSFTLIPKEELGINNNDDDDAN 65
           DE+CNI  L LGLGFG EYVPKK  KINN    +    LSFTLIPKEE            
Sbjct: 5   DEICNIR-LGLGLGFGEEYVPKK--KINN-HNPKFFSDLSFTLIPKEEA----------- 64

Query: 66  NNINMEIDDEANSSEEDDHHLMKRIRSNNNIVNYDQDSSFGIRRSSSDHHHHQYTNNNNN 125
             IN+EI  EA+SS   DH  +KRIRSNNN     QD    IR SSS             
Sbjct: 65  --INVEI--EASSS---DHDHLKRIRSNNN-----QDQ---IRDSSS------------- 124

Query: 126 IITTNHNYKGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLK 185
           I+        I+ SS     ERKKLRLSKEQS LLEESFKLHTTLNPAQKQALAQQLNLK
Sbjct: 125 IV--------INGSS-----ERKKLRLSKEQSNLLEESFKLHTTLNPAQKQALAQQLNLK 184

Query: 186 TRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYI 245
           TRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKE+ ELRSLK+GASQLYI
Sbjct: 185 TRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEVQELRSLKIGASQLYI 215

Query: 246 QLPKAATLTICPSCDKITRTAAANAAA 272
           QLPKAATLTICPSC+K+TR AAA AAA
Sbjct: 245 QLPKAATLTICPSCNKLTRNAAATAAA 215

[Close]

BLAST of ClCG06G013890 vs. TAIR 10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-40
Identity = 85/116 (73.28%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 146 RKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTE 205
           RKKLRL+K+QS LLE++FKLH+TLNP QKQALA+QLNL+ RQVEVWFQNRRARTKLKQTE
Sbjct: 125 RKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTE 184

Query: 206 VDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPSCDKI 262
           VDCEFLKKCCE L +ENRRL+KEL +L++LKL +   Y+ +P AATLT+CPSC+++
Sbjct: 185 VDCEFLKKCCETLTDENRRLQKELQDLKALKL-SQPFYMHMP-AATLTMCPSCERL 238

[Close]

BLAST of ClCG06G013890 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 162.2 bits (409), Expect = 6.2e-40
Identity = 87/143 (60.84%), Postives = 116/143 (81.12%), Query Frame = 0


Query: 138 SSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRA 197
           S   +   RKKLRLSKEQ+ +LEE+FK H+TLNP QK ALA+QLNL+TRQVEVWFQNRRA
Sbjct: 153 SGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRA 212

Query: 198 RTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPS 257
           RTKLKQTEVDCE+LK+CCE L +ENRRL+KE+ ELR+LKL +  LY+ +    TLT+CPS
Sbjct: 213 RTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKL-SPHLYMHMKPPTTLTMCPS 272

Query: 258 CDKITRTAAANAAA---VDANSP 278
           C+++  T+++++ A   ++++SP
Sbjct: 273 CERVAVTSSSSSVAPPVMNSSSP 294

[Close]

BLAST of ClCG06G013890 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 85/133 (63.91%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 146 RKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTE 205
           RKKLRLSK+Q+ +LEE+FK H+TLNP QK ALA+QLNL+ RQVEVWFQNRRARTKLKQTE
Sbjct: 162 RKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTE 221

Query: 206 VDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPSCDKITRTA 265
           VDCE+LK+CC+ L EENRRL+KE+ ELR+LKL +  LY+ +    TLT+CPSC++++ +A
Sbjct: 222 VDCEYLKRCCDNLTEENRRLQKEVSELRALKL-SPHLYMHMTPPTTLTMCPSCERVSSSA 281

Query: 266 AANAAAVDANSPP 279
           A   AA    + P
Sbjct: 282 ATVTAAPSTTTTP 293

[Close]

BLAST of ClCG06G013890 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 159.5 bits (402), Expect = 4.0e-39
Identity = 87/130 (66.92%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 146 RKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTE 205
           RKKLRLSK+QS  LE+SFK H+TLNP QK ALA+QLNL+ RQVEVWFQNRRARTKLKQTE
Sbjct: 189 RKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTE 248

Query: 206 VDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATLTICPSCDKITRTA 265
           VDCE+LK+CCE L EENRRL+KE+ ELR+LK  ++  Y+QLP A TLT+CPSC+++  +A
Sbjct: 249 VDCEYLKRCCESLTEENRRLQKEVKELRTLKT-STPFYMQLP-ATTLTMCPSCERVATSA 308

Query: 266 AANAAAVDAN 276
           A  + +   N
Sbjct: 309 AQPSTSAAHN 316

[Close]

BLAST of ClCG06G013890 vs. TAIR 10
Match: AT4G16780.1 (homeobox protein 2 )

HSP 1 Score: 158.3 bits (399), Expect = 9.0e-39
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 133 KGISSSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWF 192
           +GIS     +   RKKLRLSK+QS +LEE+FK H+TLNP QKQALA+QL L+ RQVEVWF
Sbjct: 116 RGISDDEDGD-NSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWF 175

Query: 193 QNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAATL 252
           QNRRARTKLKQTEVDCEFL++CCE L EENRRL+KE+ ELR+LKL + Q Y+ +    TL
Sbjct: 176 QNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKL-SPQFYMHMSPPTTL 235

Query: 253 TICPSCDKITRTAAANAAAVDAN 276
           T+CPSC+ ++       AA  A+
Sbjct: 236 TMCPSCEHVSVPPPQPQAATSAH 256

The following BLAST results are available for this feature:

BLAST of ClCG06G013890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879995.1	1.1e-118	88.07	homeobox-leucine zipper protein HOX17-like [Benincasa hispida]	[more]
XP_008453538.1	1.0e-105	82.81	PREDICTED: homeobox-leucine zipper protein HOX18-like [Cucumis melo] >KAA0058190...	[more]
XP_004150745.1	4.0e-105	83.04	homeobox-leucine zipper protein HOX18 [Cucumis sativus] >KGN65506.1 hypothetical...	[more]
KAG6587716.1	8.6e-68	61.73	Homeobox-leucine zipper protein HAT4, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022931479.1	2.5e-67	61.37	homeobox-leucine zipper protein HAT3-like [Cucurbita moschata]	[more]

BLAST of ClCG06G013890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46604	2.3e-39	73.28	Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 P...	[more]
P46602	8.7e-39	60.84	Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=...	[more]
P92953	1.5e-38	63.91	Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana OX=3702 GN=ATHB-4...	[more]
Q01I23	3.3e-38	54.66	Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q0JB92	3.3e-38	54.66	Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of ClCG06G013890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7USQ4	5.0e-106	82.81	Homeobox-leucine zipper protein HOX18-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BWH2	5.0e-106	82.81	homeobox-leucine zipper protein HOX18-like OS=Cucumis melo OX=3656 GN=LOC1034942...	[more]
A0A0A0M012	1.9e-105	83.04	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G433050 PE...	[more]
A0A6J1EUD1	1.2e-67	61.37	homeobox-leucine zipper protein HAT3-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1BYS3	1.0e-66	67.42	homeobox-leucine zipper protein HAT22-like OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of ClCG06G013890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37790.1	1.6e-40	73.28	Homeobox-leucine zipper protein family	[more]
AT3G60390.1	6.2e-40	60.84	homeobox-leucine zipper protein 3	[more]
AT2G44910.1	1.1e-39	63.91	homeobox-leucine zipper protein 4	[more]
AT5G06710.1	4.0e-39	66.92	homeobox from Arabidopsis thaliana	[more]
AT4G16780.1	9.0e-39	61.54	homeobox protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 201..235
None	No IPR available	GENE3D	1.10.10.60		coord: 137..207 e-value: 2.3E-18 score: 67.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..139
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 10..269
None	No IPR available	PANTHER	PTHR45714:SF26	HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN	coord: 10..269
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 202..245 e-value: 8.4E-19 score: 78.5
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 202..235 e-value: 2.1E-8 score: 34.2
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 144..206 e-value: 3.8E-15 score: 66.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 146..200 e-value: 1.0E-15 score: 57.3
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 142..202 score: 17.199833
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 146..203 e-value: 3.76025E-14 score: 63.8016
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 177..200
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 134..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G013890.1	ClCG06G013890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding