ClCG06G011890 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G011890
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	SAM domain-containing protein
Location	CG_Chr06: 24996360 .. 24997151 (+)
RNA-Seq Expression	ClCG06G011890
Synteny	ClCG06G011890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTCCTTTTTGCCCGAAATGCCCTCAAACCCGACGACATTCCTCGTTTCAACCATCATTTCCTTCAAAAAATCGGAATCTCCATCGCCAAACACAGACTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACCCACCCACAACAAATCCCTCCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCCGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCGGAGAAGATCCTTTTACGGGAAGACGCGGCGGTGATTTCGCCTGAGCCGCCGACCGTGGAGGAGGAGGAGCTTAAGCAGGTTAAGGAGGTCCCCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGCTGTCGGGGCCGTTGGACGGGAGAATGCACGAGAAGTTCGTGATGAGCAGTAAAAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGGGAGGCCGCCGCCTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTTTGGATGGGAGATTATCGGATTGGGCCTTGAGTAAAAGCCCAAAGGTGAATGGGCCGCCGCAGGGGAGAATGATGAGGCTGATTCCGCCGAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACCAGATGGAAGCCCAAGAATTTGTTGTCGTTGTAATAGGGAAAGAATGGAAACGGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTGA

mRNA sequence

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTCCTTTTTGCCCGAAATGCCCTCAAACCCGACGACATTCCTCGTTTCAACCATCATTTCCTTCAAAAAATCGGAATCTCCATCGCCAAACACAGACTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACCCACCCACAACAAATCCCTCCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCCGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCGGAGAAGATCCTTTTACGGGAAGACGCGGCGGTGATTTCGCCTGAGCCGCCGACCGTGGAGGAGGAGGAGCTTAAGCAGGTTAAGGAGGTCCCCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGCTGTCGGGGCCGTTGGACGGGAGAATGCACGAGAAGTTCGTGATGAGCAGTAAAAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGGGAGGCCGCCGCCTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTTTGGATGGGAGATTATCGGATTGGGCCTTGAGTAAAAGCCCAAAGGTGAATGGGCCGCCGCAGGGGAGAATGATGAGGCTGATTCCGCCGAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACCAGATGGAAGCCCAAGAATTTGTTGTCGTTGTAATAGGGAAAGAATGGAAACGGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTGA

Coding sequence (CDS)

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTCCTTTTTGCCCGAAATGCCCTCAAACCCGACGACATTCCTCGTTTCAACCATCATTTCCTTCAAAAAATCGGAATCTCCATCGCCAAACACAGACTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACCCACCCACAACAAATCCCTCCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCCGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCGGAGAAGATCCTTTTACGGGAAGACGCGGCGGTGATTTCGCCTGAGCCGCCGACCGTGGAGGAGGAGGAGCTTAAGCAGGTTAAGGAGGTCCCCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGCTGTCGGGGCCGTTGGACGGGAGAATGCACGAGAAGTTCGTGATGAGCAGTAAAAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGGGAGGCCGCCGCCTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTTTGGATGGGAGATTATCGGATTGGGCCTTGAGTAAAAGCCCAAAGGTGAATGGGCCGCCGCAGGGGAGAATGATGAGGCTGATTCCGCCGAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACCAGATGGAAGCCCAAGAATTTGTTGTCGTTGTAATAGGGAAAGAATGGAAACGGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTGA

Protein sequence

MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLAKSHSHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEEEELKQVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPRSPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRCNRERMETDDDYHSLWVSLFYDMKPT

Homology

[Close]

BLAST of ClCG06G011890 vs. NCBI nr
Match: XP_038879652.1 (uncharacterized protein LOC120071438 [Benincasa hispida])

HSP 1 Score: 471.9 bits (1213), Expect = 3.7e-129
Identity = 236/264 (89.39%), Postives = 247/264 (93.56%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSHSH-QPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEE 120
           KSH+H QPT N  LLSAFTKTK CLRNCLRKLILPTARP+K + RED AVISPEPPT++E
Sbjct: 61  KSHTHQQPTLNNPLLSAFTKTKICLRNCLRKLILPTARPDKGVFREDTAVISPEPPTLDE 120

Query: 121 EELKQVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPRS 180
            ++K+V  V  PP+RRSKHVSLSGPLDGR HEKFVMSSKSLKLSGPLDRK R PPMFPRS
Sbjct: 121 VKVKEV--VKPPPKRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKER-PPMFPRS 180

Query: 181 PRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRCN 240
           PRTSGPLDGR+SDWALSKSPKVNGPPQGRMM+LIPPSRSPRVSGPLDG DGSPRICCRCN
Sbjct: 181 PRTSGPLDGRVSDWALSKSPKVNGPPQGRMMKLIPPSRSPRVSGPLDGRDGSPRICCRCN 240

Query: 241 RERMETDDDYHSLWVSLFYDMKPT 264
           RERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 RERMETDDDYHSLWVSLFYDMKPT 261

[Close]

BLAST of ClCG06G011890 vs. NCBI nr
Match: KAG6589808.1 (hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431.0 bits (1107), Expect = 7.3e-117
Identity = 214/265 (80.75%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L+P+DIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEEE 120
           K +  + T  K LLSAF KTKNCLRNCLRKLI   A+ EK + REDAAV+SPEP T  E+
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 ELK--QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPR 180
             +  +VKEV KPP+RRSKHVSLSGPLDGR HEK + +SKSLKLSGPLDRK R  PMFPR
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER--PMFPR 180

Query: 181 SPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRC 240
           SPR+SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVSGPLDG DGSPRICCRC
Sbjct: 181 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 240

Query: 241 NRERMETDDDYHSLWVSLFYDMKPT 264
           NRERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of ClCG06G011890 vs. NCBI nr
Match: KAG7023481.1 (hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430.6 bits (1106), Expect = 9.5e-117
Identity = 213/265 (80.38%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L+P+DIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEEE 120
           K +  + T  K LLSAF KTKNCLRNCLRKLI   A+ EK + REDAAV+SPEP T  E+
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 ELK--QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPR 180
             +  +VKEV KPP+RRSKHVSLSGPLDGR HEK + +SKSLKLSGPLDRK R  PMFPR
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER--PMFPR 180

Query: 181 SPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRC 240
           SPR+SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVSGPLDG DGSPR+CCRC
Sbjct: 181 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRC 240

Query: 241 NRERMETDDDYHSLWVSLFYDMKPT 264
           NRERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of ClCG06G011890 vs. NCBI nr
Match: XP_022960905.1 (uncharacterized protein LOC111461567 [Cucurbita moschata])

HSP 1 Score: 430.3 bits (1105), Expect = 1.2e-116
Identity = 214/265 (80.75%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L+P+DIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EK + REDAAV+SPEP T  E+
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 ELK--QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPR 180
             +  +VKEV KPP+RRSKHVSLSGPLDGR HEK + +SKSLKLSGPLDRK R  PMFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER--PMFPR 199

Query: 181 SPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRC 240
           SPR+SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVSGPLDG DGSPRICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 259

Query: 241 NRERMETDDDYHSLWVSLFYDMKPT 264
           NRERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of ClCG06G011890 vs. NCBI nr
Match: XP_023516525.1 (uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.5 bits (1103), Expect = 2.1e-116
Identity = 214/265 (80.75%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L+P+DIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EK + REDAAVISPEP T  E+
Sbjct: 80  KCDREEATQKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 139

Query: 121 ELK--QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPR 180
             +  +VKEV KPP+RRSKHVSLSGPLDGR HEK + +SKSLKLSGPLDRK R  PMFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER--PMFPR 199

Query: 181 SPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRC 240
           SPR+SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVSGPLDG DGSP+ICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPKICCRC 259

Query: 241 NRERMETDDDYHSLWVSLFYDMKPT 264
           NRERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of ClCG06G011890 vs. ExPASy TrEMBL
Match: A0A6J1HAF4 (uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC111461567 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.0e-117
Identity = 214/265 (80.75%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L+P+DIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EK + REDAAV+SPEP T  E+
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 ELK--QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPR 180
             +  +VKEV KPP+RRSKHVSLSGPLDGR HEK + +SKSLKLSGPLDRK R  PMFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER--PMFPR 199

Query: 181 SPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRC 240
           SPR+SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVSGPLDG DGSPRICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 259

Query: 241 NRERMETDDDYHSLWVSLFYDMKPT 264
           NRERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of ClCG06G011890 vs. ExPASy TrEMBL
Match: A0A5A7U992 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00390 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.6e-116
Identity = 223/275 (81.09%), Postives = 235/275 (85.45%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNALKP+DIPRFNHHFLQKIGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEE 120
           KSH +HQP  N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 EELK-QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRP------ 180
           +E K +VKEV KPPRRRSKHVSLSGPLD R HEKFVMSSKSLKLSGPLDRK RP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PPMFPRSPRTSGPLDGRLSDWALS-KSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGP 240
              PPMFPRSPRTSGPLDGR+SDW LS KSPKVNGPPQGRMMRLIPPSRSPRVSGPLDG 
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPRICCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           DGSPRICCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of ClCG06G011890 vs. ExPASy TrEMBL
Match: A0A1S3B951 (uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.6e-116
Identity = 223/275 (81.09%), Postives = 235/275 (85.45%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNALKP+DIPRFNHHFLQKIGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEE 120
           KSH +HQP  N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 EELK-QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRP------ 180
           +E K +VKEV KPPRRRSKHVSLSGPLD R HEKFVMSSKSLKLSGPLDRK RP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PPMFPRSPRTSGPLDGRLSDWALS-KSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGP 240
              PPMFPRSPRTSGPLDGR+SDW LS KSPKVNGPPQGRMMRLIPPSRSPRVSGPLDG 
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPRICCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           DGSPRICCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of ClCG06G011890 vs. ExPASy TrEMBL
Match: A0A5D3CF00 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00280 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 8.6e-116
Identity = 223/275 (81.09%), Postives = 235/275 (85.45%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNALKP+DIPRFNHHFLQKIGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEE 120
           KSH +HQP  N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSHAPDK-------PIISPEPPPSSL 120

Query: 121 EELK-QVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRP------ 180
           +E K +VKEV KPPRRRSKHVSLSGPLD R HEKFVMSSKSLKLSGPLDRK RP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PPMFPRSPRTSGPLDGRLSDWALS-KSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGP 240
              PPMFPRSPRTSGPLDGR+SDW LS KSPKVNGPPQGRMMRLIPPSRSPRVSGPLDG 
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPRICCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           DGSPRICCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of ClCG06G011890 vs. ExPASy TrEMBL
Match: A0A6J1JJY8 (uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.2e-114
Identity = 212/265 (80.00%), Postives = 228/265 (86.04%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN LKP+DIPRFNH FLQ+IG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLKPEDIPRFNHDFLQRIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQPTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKILLREDAAVISPEPPTVEEE 120
           K    + T  K LLSA  KTKNCLRNCLRKLI   A+ EK + REDAAVISPEP T  E+
Sbjct: 61  KCDREEATQKKLLLSALAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 120

Query: 121 --ELKQVKEVPKPPRRRSKHVSLSGPLDGRMHEKFVMSSKSLKLSGPLDRKGRPPPMFPR 180
               ++VKEV KPP+RRSKHVSLSGPLDGR HEK + +SKSLKLSGPLDRK R  PM PR
Sbjct: 121 LSRKQEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER--PMVPR 180

Query: 181 SPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGPDGSPRICCRC 240
           SPR SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVS PLDG DGSPRICCRC
Sbjct: 181 SPRLSGPLDGRVSDWASSRSPKMNGPPQGRMMRLIPPSRSPRVSEPLDGRDGSPRICCRC 240

Query: 241 NRERMETDDDYHSLWVSLFYDMKPT 264
           NRERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of ClCG06G011890 vs. TAIR 10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-30
Identity = 101/283 (35.69%), Postives = 150/283 (53.00%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
           MDWFSWLS+T LDP  +YEYGL+FA+  L+ +DI  FNH+FL+++G+++ KHR+EILKL+
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61  K-------SHSHQPTHNKSLLSAFTKTKNCLRNCLRKLIL--PTARPEKILLRED----- 120
           K       S++H+P   K L+S   K    + N L K +    TA  E +  ++      
Sbjct: 61  KRETQALSSYNHRPVSAK-LISVVIKATKSVGNRLNKWLSLGGTAVVEPLKEKQSPPPAY 120

Query: 121 --AAVISPEPPTVEEEELKQVKEVPKPPRRRSKHVSLSGPLD---GRMHEKFVMSSKSLK 180
              A ++     V  E  K V +V + P  + K +  SGPLD   G   +  ++S++S+ 
Sbjct: 121 RTGAFLTGNNNKVNAE--KAVVQVERLPVIKRKRIVKSGPLDRNHGIQEKMTLVSNRSMN 180

Query: 181 LSGPLDRKGRPPPMFP-RSPRTSGPLDGRLSDWALSKSPKVNGPPQGRMMRLIPPSRSPR 240
           LSGPLDR  +   +   RSP  SG LDG L++                  RL       R
Sbjct: 181 LSGPLDRSVQERLILAYRSPIVSGQLDGNLNE------------------RL-------R 240

Query: 241 VSGPLDGPDGSPRICCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           +SGPL G   SP +    N+     DDD  + W ++F+++KPT
Sbjct: 241 LSGPLKGRPPSPSVYVEYNKR----DDD--TRWDAMFHNLKPT 249

[Close]

BLAST of ClCG06G011890 vs. TAIR 10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-18
Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 1  MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60
          MDWFSWLSRT L+    YEYGL F+ N L+ +DI  FNH FLQ +GISIAKHRLEILKLA
Sbjct: 1  MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61 -KSHSHQPTHNKSL---LSAFTKTKNCLRNCLRKLI 93
           +     P   +S+   L A  KT  C    +R  I
Sbjct: 61 RRDRKPSPLTARSIFRVLIAIKKTGKCFSEHVRAWI 96

[Close]

BLAST of ClCG06G011890 vs. TAIR 10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.8e-18
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 3  WFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLAK- 62
          WFSWLSRT L+P   +EYGL F++N L+ +DI  F+H FLQ +GISIAKHRLEILKLA+ 
Sbjct: 5  WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63 -SHSHQPTHNKSL---LSAFTKTKNCLRNCLRKLI 93
             +  P  ++S+   ++A  KT+ CL + +R  I
Sbjct: 65 DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWI 99

The following BLAST results are available for this feature:

BLAST of ClCG06G011890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879652.1	3.7e-129	89.39	uncharacterized protein LOC120071438 [Benincasa hispida]	[more]
KAG6589808.1	7.3e-117	80.75	hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023481.1	9.5e-117	80.38	hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022960905.1	1.2e-116	80.75	uncharacterized protein LOC111461567 [Cucurbita moschata]	[more]
XP_023516525.1	2.1e-116	80.75	uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG06G011890 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G011890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAF4	6.0e-117	80.75	uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]
A0A5A7U992	6.6e-116	81.09	Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3B951	6.6e-116	81.09	uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=...	[more]
A0A5D3CF00	8.6e-116	81.09	Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1JJY8	1.2e-114	80.00	uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262...	[more]

BLAST of ClCG06G011890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G12462.1	7.2e-30	35.69	BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-con...	[more]
AT1G80520.1	2.8e-18	53.13	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G15760.1	4.8e-18	50.53	Sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 1..68 e-value: 7.3E-10 score: 40.3
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 12..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..155
None	No IPR available	PANTHER	PTHR33915:SF3	STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN	coord: 1..263
None	No IPR available	PANTHER	PTHR33915	OSJNBA0033G05.11 PROTEIN	coord: 1..263
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 2..61 e-value: 1.75339E-8 score: 48.0045

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G011890.1	ClCG06G011890.1	mRNA