ClCG06G011730 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G011730
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-type domain-containing protein
Location	CG_Chr06: 24794143 .. 24796858 (-)
RNA-Seq Expression	ClCG06G011730
Synteny	ClCG06G011730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAATTGTTCCTCTCTTCTAGTGATTTCCTTGAACCGTAAATCCTCAGCATCTGCGATATATCAAATCCACTGGGTTTGTGTTTCTGCTCCAAAAAGGCCCAAAACCGTTCATTCAATTCAATTCAATTCAATTCAAAGATGATCATCATCGCCTAAATTTAACCTCCAAATTATATTAATCCTCACTCTCCTCGCTTTATTAACAATCTTAATCACTATGGGAAAGCGCAAGCGAGGTTCTGATCAGACCCACCACGATCCTCCTCGTCATCTCTCCGGTATGCCGTTTCTTTCTCTGATCATCATCATGCCCTGTTTCTGTTTGTTAAAATGCCTGAAAGGGATGATTCCTTTGCGTCCGTACAGAGTTTTTCTTGTTTTTCTTGTTTTTTCTTATGTGGGATATCGTTCTAGACGATGGATCTTCTTTGTTTGAGCTTTGAAATTTATGGGGTGTCATTGGAGGATATGGGTTTTGTAGAGTAAAATACTTTTTTAGAAGTTCAATTGGGTCTATGAGAATTCTCTGTTGGGGGAAATAATTAAAGAATGAATGCTAGTTTTTCTTTGCCTTTTTTAAGTATTTCAATTCTACTAGAAGATATTGGAGGTTGGTATGGGTCTTTTTAAGGATGCATTCTGTTTCAGAGATGTAGTTTGTTGACCAATCTCAGTCAATTGGCTTACTTCAATACCTCTGGAAATTAGCTGTAGGTTGGATGCATTTGTATTCTCTTTCTTTTGATTATATGAAGATCGAGATGTGTTATTCTAGATATCAAGGTGGAGTTGAGTTAATTTTACGCCTTAGAACTGATGATTAAGTTTAACTCTACACTGTGATAGAATTCTGATTTTCCTAGAACATGTTTCGTACTTATTTTGCAGGTGTAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGTTTGTACTCTTTTGTTGTTTAAGTGAGTAGGAAAAAGAATACTTTAATCCTTTCCCTTGGTAGAGACAGTATTTAAGTTAAATTAAAATTTTGGTCCCTATGATAACTAGAAAGTTAGAATTTAGTCCTGGTTTTAAAAGTCAGTGTTTATGGTTTGAAAAGGCCTCATAAATAGTTCAATGGTTTGATAACCTCTCACAATGATAGGACTATTTATGAGAGGTTTATCAAACCATAGGGACTAAACTCTAATTATAAACTATATGTACCAAATTTATAATTTAACCAAGCATTTAAGTTCCATTTAGTGGACCACAATCTATTAAACTTGGGTTGCATTGAACGAGCAGGATCGGAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAATATTGTCGCCGAGGTTCAACCAGCCAAGCAAATGCATCTACATCCCACGAAAACCGAGTTAAAACCGTACTTGAAGAACGACCTGCTTTTAAACTTGCTGCTCAGTGCAACTCAGAGTTTTCAGACCATATAGGTACCCTTCTTGAAGTTCCTAAACACGGTCGTTTATGTTTTCTCTGGGAGTAATGAGAGTACTTCTCACGATGGCATGTTAAATACTTGTATGATCTTTAAATGTTGTATTTGAAAATTCGTGCTTTTAAGCATTTAGAAAGTCATTCTAGACGGGCCATTCATGTTCTATGTGATGTAAATATATTGAATATCAGTGGCCTCTTTTTCTGTCTCATTTATTTGCAGTTTTGGTGGTTTTAGTACTTGAATTCTGGATAAAGAACAGCCAGTTTTGTGGCATGAAACACTTATTTTAAAAGGGAAGTGTCCTAATAATGTATCATAGACCTGAACTAAGTTGGAATTATCATCAAGATAAATCCTAACGATCATCGACTAAATGAAGATGAAGTATATAACTATATTAGTCTCTCATCCCACGCCGTTCGATGCTCTCGCTCTATTGGGGGAAGATAATTGCTTCTTCTGAATTGATAATGTTGTTCTTCTATATTAACTTGAATTTTGTCTTGATTTTAGAGAGCATTGAGAGCACCTTTTGGGGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGGATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGAAACACGCTTTCTTCCAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAATGTGGAAGATAGAAGTGACCCACCTTGTCCATTGTGCATGGAACCGCTTCCCAAAGCCGACGATTCAAAAGGAGAAGAACAGGAATGAGTTGATTTGTACATAATGTTATCACATAGCACCAACATAGGAAATAGGCTTGGTTCTGACTTGAATGGGCAGCTTATAAGGTGGAGTTTTTGCATCCTCGACTATTTTTCCATGAACTAATCAATCACTGTGTTTTTTTCTGGATGGCTGTGATTTAGAAACAGAAAATAGTTGCTTTAAATCACAACCGTTCAGAAAATAGTGATTACGAGTCGAAAGGTAACGAGGATTTGCCCTCCATAGATTTCTTTTTGTGTAGAGCTAAATTGACATGTCCAAGTCCTCTGTTTCCTTCTGGATTACTTTTATCTTGTAGTAGGATTGGAGGATTTTAGTTGAGACATTGTACTTCTTTACAGCAATGTCTAAAACAGTATATTTTAGAAAGAATTGATGTTGG

mRNA sequence

ATCAATTGTTCCTCTCTTCTAGTGATTTCCTTGAACCGTAAATCCTCAGCATCTGCGATATATCAAATCCACTGGGTTTGTGTTTCTGCTCCAAAAAGGCCCAAAACCGTTCATTCAATTCAATTCAATTCAATTCAAAGATGATCATCATCGCCTAAATTTAACCTCCAAATTATATTAATCCTCACTCTCCTCGCTTTATTAACAATCTTAATCACTATGGGAAAGCGCAAGCGAGGTTCTGATCAGACCCACCACGATCCTCCTCGTCATCTCTCCGGTGTAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAATATTGTCGCCGAGGTTCAACCAGCCAAGCAAATGCATCTACATCCCACGAAAACCGAGTTAAAACCGTACTTGAAGAACGACCTGCTTTTAAACTTGCTGCTCAGTGCAACTCAGAGTTTTCAGACCATATAGAGAGCATTGAGAGCACCTTTTGGGGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGGATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGAAACACGCTTTCTTCCAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAATGTGGAAGATAGAAGTGACCCACCTTGTCCATTGTGCATGGAACCGCTTCCCAAAGCCGACGATTCAAAAGGAGAAGAACAGGAATGAGTTGATTTGTACATAATGTTATCACATAGCACCAACATAGGAAATAGGCTTGGTTCTGACTTGAATGGGCAGCTTATAAGGTGGAGTTTTTGCATCCTCGACTATTTTTCCATGAACTAATCAATCACTGTGTTTTTTTCTGGATGGCTGTGATTTAGAAACAGAAAATAGTTGCTTTAAATCACAACCGTTCAGAAAATAGTGATTACGAGTCGAAAGGTAACGAGGATTTGCCCTCCATAGATTTCTTTTTGTGTAGAGCTAAATTGACATGTCCAAGTCCTCTGTTTCCTTCTGGATTACTTTTATCTTGTAGTAGGATTGGAGGATTTTAGTTGAGACATTGTACTTCTTTACAGCAATGTCTAAAACAGTATATTTTAGAAAGAATTGATGTTGG

Coding sequence (CDS)

ATGGGAAAGCGCAAGCGAGGTTCTGATCAGACCCACCACGATCCTCCTCGTCATCTCTCCGGTGTAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAATATTGTCGCCGAGGTTCAACCAGCCAAGCAAATGCATCTACATCCCACGAAAACCGAGTTAAAACCGTACTTGAAGAACGACCTGCTTTTAAACTTGCTGCTCAGTGCAACTCAGAGTTTTCAGACCATATAGAGAGCATTGAGAGCACCTTTTGGGGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGGATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGAAACACGCTTTCTTCCAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAATGTGGAAGATAGAAGTGACCCACCTTGTCCATTGTGCATGGAACCGCTTCCCAAAGCCGACGATTCAAAAGGAGAAGAACAGGAATGA

Protein sequence

MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPLPKADDSKGEEQE

Homology

[Close]

BLAST of ClCG06G011730 vs. NCBI nr
Match: XP_038878632.1 (uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida])

HSP 1 Score: 389.0 bits (998), Expect = 2.5e-104
Identity = 188/204 (92.16%), Postives = 190/204 (93.14%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPP HLSG+VPFSNQMDVRSEEDRS ARPVFMKRSRHQYSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQMDVRSEEDRSPARPVFMKRSRHQYSHQYCRRG 60

Query: 61  STSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKD 120
           STS ANAS S ENRVKTVLEERPAFK AA CNSEF DHIESIE TFWGPERIRYNS GKD
Sbjct: 61  STSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           A SSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR
Sbjct: 121 AFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180

Query: 181 SDPPCPLCMEPLPKADDSKGEEQE 205
           SDPPCPLCMEP P+ DDSKG EQE
Sbjct: 181 SDPPCPLCMEPPPEVDDSKGGEQE 204

[Close]

BLAST of ClCG06G011730 vs. NCBI nr
Match: XP_038878631.1 (uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida])

HSP 1 Score: 384.4 bits (986), Expect = 6.0e-103
Identity = 188/205 (91.71%), Postives = 190/205 (92.68%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEE-DRSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKRGSDQTHHDPP HLSG+VPFSNQMDVRSEE DRS ARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQMDVRSEEQDRSPARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGK 120
           GSTS ANAS S ENRVKTVLEERPAFK AA CNSEF DHIESIE TFWGPERIRYNS GK
Sbjct: 61  GSTSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFGK 120

Query: 121 DAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180
           DA SSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED
Sbjct: 121 DAFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180

Query: 181 RSDPPCPLCMEPLPKADDSKGEEQE 205
           RSDPPCPLCMEP P+ DDSKG EQE
Sbjct: 181 RSDPPCPLCMEPPPEVDDSKGGEQE 205

[Close]

BLAST of ClCG06G011730 vs. NCBI nr
Match: XP_008443927.1 (PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA0050085.1 uncharacterized protein E6C27_scaffold675G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 370.5 bits (950), Expect = 9.0e-99
Identity = 182/204 (89.22%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPP HLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKD 120
           STSQANASTS ENRV+TVLEERPAFK AA CNSEF D IESIESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPLPKADDSKGEEQE 205
           SDPPCPLC +  P+ DDSKG EQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of ClCG06G011730 vs. NCBI nr
Match: TYK06338.1 (uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-98
Identity = 181/204 (88.73%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPP HLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKD 120
           STSQANASTS ENRV+TVLEERPAFK AA CNSEF D IESIESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH +RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPLPKADDSKGEEQE 205
           SDPPCPLC +  P+ DDSKG EQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of ClCG06G011730 vs. NCBI nr
Match: XP_022134599.1 (uncharacterized protein LOC111006826 [Momordica charantia])

HSP 1 Score: 361.3 bits (926), Expect = 5.5e-96
Identity = 177/201 (88.06%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MGKRKR-GSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPP HLSGVVPFSNQMDV SEED+SLARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGK 120
           GSTSQANASTS ENRV+TVLEERPAFK AA CNSEF +HIESIE+TFWGPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180
           DAISSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCMEPLPKADDSKG 201
           RSDPPCPLC EP  K DDSKG
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKG 201

[Close]

BLAST of ClCG06G011730 vs. ExPASy TrEMBL
Match: A0A5A7U906 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00690 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.4e-99
Identity = 182/204 (89.22%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPP HLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKD 120
           STSQANASTS ENRV+TVLEERPAFK AA CNSEF D IESIESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPLPKADDSKGEEQE 205
           SDPPCPLC +  P+ DDSKG EQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of ClCG06G011730 vs. ExPASy TrEMBL
Match: A0A1S3B956 (uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.4e-99
Identity = 182/204 (89.22%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPP HLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKD 120
           STSQANASTS ENRV+TVLEERPAFK AA CNSEF D IESIESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPLPKADDSKGEEQE 205
           SDPPCPLC +  P+ DDSKG EQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of ClCG06G011730 vs. ExPASy TrEMBL
Match: A0A5D3C5B4 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00020 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 181/204 (88.73%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPP HLSG+VPFSNQ DVRSEED SLARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKD 120
           STSQANASTS ENRV+TVLEERPAFK AA CNSEF D IESIESTF GPERIRYNSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH +RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPLPKADDSKGEEQE 205
           SDPPCPLC +  P+ DDSKG EQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of ClCG06G011730 vs. ExPASy TrEMBL
Match: A0A6J1BZ68 (uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006826 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96
Identity = 177/201 (88.06%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MGKRKR-GSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPP HLSGVVPFSNQMDV SEED+SLARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGK 120
           GSTSQANASTS ENRV+TVLEERPAFK AA CNSEF +HIESIE+TFWGPERIRY+SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180
           DAISSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCMEPLPKADDSKG 201
           RSDPPCPLC EP  K DDSKG
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKG 201

[Close]

BLAST of ClCG06G011730 vs. ExPASy TrEMBL
Match: A0A6J1HAS2 (uncharacterized protein LOC111461650 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461650 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95
Identity = 172/202 (85.15%), Postives = 183/202 (90.59%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPRHLSGVVPFSNQMDVRSEEDRSLARPVFMKRSRHQYSHQYCRRG 60
           MGKRK GSDQTHHD P HLSG+VPFSNQMDVRSEEDRSLARP+FMKRSRHQYSHQYCRRG
Sbjct: 7   MGKRKPGSDQTHHDRPHHLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRG 66

Query: 61  STSQANASTSHENRVKTVLEERPAFKLAAQCNSEFSDHIESIESTFWGPERIRYNSLGKD 120
           STS+ANASTS ENRV+T+LE+RPAFK AA CNSEF DHIES ESTF  PERIRYNSLGKD
Sbjct: 67  STSEANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKD 126

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
            ISSHG ++VCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHA+CLEN SNVEDR
Sbjct: 127 TISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPIAAVLVCGHVYHADCLENGSNVEDR 186

Query: 181 SDPPCPLCMEPLPKADDSKGEE 203
           SDP CPLCMEP  K DDS  +E
Sbjct: 187 SDPGCPLCMEPPAKVDDSTEQE 208

[Close]

BLAST of ClCG06G011730 vs. TAIR 10
Match: AT1G75400.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-12
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 128 RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPL 187
           + VCG C KL+  +     +++++ ELP+AAVL CGHVYHAECLE  +   ++ DP CP+
Sbjct: 278 QQVCGACSKLLTER-----SSIATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPI 333

Query: 188 C 189
           C
Sbjct: 338 C 333

[Close]

BLAST of ClCG06G011730 vs. TAIR 10
Match: AT1G19680.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 108 GPERIRYNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYH 167
           G  R+   S  + + S    +  CG C KL+  +     + ++  +LP+ AVL CGHVYH
Sbjct: 250 GRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTER-----SPVARFDLPIPAVLACGHVYH 309

Query: 168 AECLENRSNVEDRSDPPCPLCME 191
           A CLE  +N  ++ DP CP+C E
Sbjct: 310 AACLETMTNETEKYDPTCPICTE 327

[Close]

BLAST of ClCG06G011730 vs. TAIR 10
Match: AT4G39140.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 117 LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAE 176
           L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSNVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

[Close]

BLAST of ClCG06G011730 vs. TAIR 10
Match: AT4G39140.2 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 117 LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAE 176
           L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSNVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

[Close]

BLAST of ClCG06G011730 vs. TAIR 10
Match: AT4G39140.3 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 117 LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAE 176
           L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSNVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

The following BLAST results are available for this feature:

BLAST of ClCG06G011730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878632.1	2.5e-104	92.16	uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]	[more]
XP_038878631.1	6.0e-103	91.71	uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]	[more]
XP_008443927.1	9.0e-99	89.22	PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA00...	[more]
TYK06338.1	2.6e-98	88.73	uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa]	[more]
XP_022134599.1	5.5e-96	88.06	uncharacterized protein LOC111006826 [Momordica charantia]	[more]

BLAST of ClCG06G011730 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G011730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U906	4.4e-99	89.22	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3B956	4.4e-99	89.22	uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C5B4	1.3e-98	88.73	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1BZ68	2.6e-96	88.06	uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1HAS2	3.8e-95	85.15	uncharacterized protein LOC111461650 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of ClCG06G011730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75400.1	2.3e-12	47.54	RING/U-box superfamily protein	[more]
AT1G19680.1	2.0e-11	37.35	RING/U-box superfamily protein	[more]
AT4G39140.1	2.6e-11	41.77	RING/U-box superfamily protein	[more]
AT4G39140.2	2.6e-11	41.77	RING/U-box superfamily protein	[more]
AT4G39140.3	2.6e-11	41.77	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 131..188 e-value: 1.8E-4 score: 30.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 131..188 score: 10.261575
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 114..202 e-value: 1.9E-8 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..72
None	No IPR available	PANTHER	PTHR31150:SF6	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 37..197
None	No IPR available	PANTHER	PTHR31150	EXPRESSED PROTEIN	coord: 37..197
None	No IPR available	CDD	cd16448	RING-H2	coord: 131..189 e-value: 1.41168E-4 score: 36.2759
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 130..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G011730.1	ClCG06G011730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding