ClCG06G010950 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGGTTGCAGAGGTCCGCCGTGTCGTTCCGGCGACAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTTCAGCGGTGAATTGAAACCGACAAAGCGCCGCCATGAAGAACACGACGTGGTTTTTCTTTCCGGAGAGTTAAGACCTCGAAACGTCGGATCGGGCGGCCCCACCTTCGAACGAACCCGATCTTCCGCCGCCTACCGGATGGAGGCAATATCCCCGTCGCCGTCGCCGAGCACGGGGGATTCTTCTTCACCGAAGTTCGCCGGCTGTGGGTTCTGCGGCGTGTTTGGTCGCCCCATCGGCGGGCCTCGCCAACAGAAATCCAACAAGCGTCGATCGGAGTAA ATGGCTGGGTTGCAGAGGTCCGCCGTGTCGTTCCGGCGACAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTTCAGCGGTGAATTGAAACCGACAAAGCGCCGCCATGAAGAACACGACGTGGTTTTTCTTTCCGGAGAGTTAAGACCTCGAAACGTCGGATCGGGCGGCCCCACCTTCGAACGAACCCGATCTTCCGCCGCCTACCGGATGGAGGCAATATCCCCGTCGCCGTCGCCGAGCACGGGGGATTCTTCTTCACCGAAGTTCGCCGGCTGTGGGTTCTGCGGCGTGTTTGGTCGCCCCATCGGCGGGCCTCGCCAACAGAAATCCAACAAGCGTCGATCGGAGTAA ATGGCTGGGTTGCAGAGGTCCGCCGTGTCGTTCCGGCGACAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTTCAGCGGTGAATTGAAACCGACAAAGCGCCGCCATGAAGAACACGACGTGGTTTTTCTTTCCGGAGAGTTAAGACCTCGAAACGTCGGATCGGGCGGCCCCACCTTCGAACGAACCCGATCTTCCGCCGCCTACCGGATGGAGGCAATATCCCCGTCGCCGTCGCCGAGCACGGGGGATTCTTCTTCACCGAAGTTCGCCGGCTGTGGGTTCTGCGGCGTGTTTGGTCGCCCCATCGGCGGGCCTCGCCAACAGAAATCCAACAAGCGTCGATCGGAGTAA MAGLQRSAVSFRRQGSSGLVWDDRFFSGELKPTKRRHEEHDVVFLSGELRPRNVGSGGPTFERTRSSAAYRMEAISPSPSPSTGDSSSPKFAGCGFCGVFGRPIGGPRQQKSNKRRSE Homology
BLAST of ClCG06G010950 vs. NCBI nr
Match: XP_008465027.1 (PREDICTED: uncharacterized protein At1g15400 [Cucumis melo] >KAA0046761.1 uncharacterized protein E6C27_scaffold216G00440 [Cucumis melo var. makuwa] >TYK29686.1 uncharacterized protein E5676_scaffold64G00370 [Cucumis melo var. makuwa]) HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46 Identity = 101/120 (84.17%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of ClCG06G010950 vs. NCBI nr
Match: XP_004151607.1 (uncharacterized protein At1g15400 [Cucumis sativus] >KGN65310.1 hypothetical protein Csa_020108 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 3.1e-43 Identity = 102/124 (82.26%), Postives = 108/124 (87.10%), Query Frame = 0
BLAST of ClCG06G010950 vs. NCBI nr
Match: XP_022965353.1 (uncharacterized protein At1g15400-like [Cucurbita maxima]) HSP 1 Score: 172.9 bits (437), Expect = 1.6e-39 Identity = 92/118 (77.97%), Postives = 98/118 (83.05%), Query Frame = 0
BLAST of ClCG06G010950 vs. NCBI nr
Match: XP_022987911.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 172.9 bits (437), Expect = 1.6e-39 Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0
BLAST of ClCG06G010950 vs. NCBI nr
Match: XP_022960593.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita moschata] >KAG6589861.1 hypothetical protein SDJN03_15284, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.6 bits (436), Expect = 2.1e-39 Identity = 91/116 (78.45%), Postives = 98/116 (84.48%), Query Frame = 0
BLAST of ClCG06G010950 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 2.8e-10 Identity = 52/140 (37.14%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of ClCG06G010950 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.2e-07 Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = 0
BLAST of ClCG06G010950 vs. ExPASy TrEMBL
Match: A0A5A7TZI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00370 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46 Identity = 101/120 (84.17%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of ClCG06G010950 vs. ExPASy TrEMBL
Match: A0A1S3CMU7 (uncharacterized protein At1g15400 OS=Cucumis melo OX=3656 GN=LOC103502744 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46 Identity = 101/120 (84.17%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of ClCG06G010950 vs. ExPASy TrEMBL
Match: A0A0A0LTQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G308810 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43 Identity = 102/124 (82.26%), Postives = 108/124 (87.10%), Query Frame = 0
BLAST of ClCG06G010950 vs. ExPASy TrEMBL
Match: A0A6J1HNM7 (uncharacterized protein At1g15400-like OS=Cucurbita maxima OX=3661 GN=LOC111465235 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 7.7e-40 Identity = 92/118 (77.97%), Postives = 98/118 (83.05%), Query Frame = 0
BLAST of ClCG06G010950 vs. ExPASy TrEMBL
Match: A0A6J1JFP4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111485313 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 7.7e-40 Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0
BLAST of ClCG06G010950 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11 Identity = 52/140 (37.14%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of ClCG06G010950 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11 Identity = 52/140 (37.14%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of ClCG06G010950 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11 Identity = 52/140 (37.14%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of ClCG06G010950 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 7.5e-11 Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 0
BLAST of ClCG06G010950 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08 Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|