ClCG06G009700 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG06G009700
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr06: 18729570 .. 18730300 (+)
RNA-Seq ExpressionClCG06G009700
SyntenyClCG06G009700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGTTGGCTGAGCAACCTGAGGATGCAGTTGCTTCAGTTGTTACGGAATTTTACTATGGCATCGAGGAAGGCAAGGATGTCTCAATTGTTAGAGGGGTTAGAGTCCCCTTTTTTTCTTCTGTATTAATGACATCTATCACGTGGCTAACATAGCTGATGATGATTTTCTGAGGTTTTTGTTGTAGCCATTTGATGAAATGCACATTGCTAAGGTCTTTTGTGGGCTAGGGATTGACTGGATCCACACAAATGGTGTGGCGATGCATCTTAGGGGGATAGATATAACTATCTCCAACCAGGTCTGGCATGCTGTCATTTGCGCCATGTTGATGCTTGTCACCCGTCTTCCTGAGGTGACCAAAGATAGAGTGCAGCTACTCTATTGTCTTAGCACAGACCGATCTGTTAACATTGGTAAGGTCATTTGCGACTCTATATAATGTAGCAAATATTGCGCCACCACTGGAGGCTTTGAGCATCTATGCTTAATCACGGAGCTTTGCCAACAGTTGGGTGTTGAGATAGGGAGGCAAGAAGAGAAGGTAAGTTCCAAAGGTGCTATTGTAGGACTACCATCTTCGCCTTTAGAGGTCATGGAGAGGAGGAGTGTGGTGAAGAAGAACACCATGGGGTGGAAGCTCATGGCGATAATTGACAGGATCATCACAAGGTGGAGATTAAAGAAGAGTCGTTGGGTGAGTGTGCTTTTAGGATGGCTACGGAGGCCTTGA

mRNA sequence

GCGTTGGCTGAGCAACCTGAGGATGCAGTTGCTTCAGTTGTTACGGAATTTTACTATGGCATCGAGGAAGGCAAGGATGTCTCAATTGTTAGAGGGCCATTTGATGAAATGCACATTGCTAAGGTCTTTTGTGGGCTAGGGATTGACTGGATCCACACAAATGGTGTGGCGATGCATCTTAGGGGGATAGATATAACTATCTCCAACCAGGTCTGGCATGCTGTCATTTGCGCCATGTTGATGCTTGTCACCCGTCTTCCTGAGGTGACCAAAGATAGAGTGCAGCTACTCTATTGTCTTAGCACAGACCGATCTGTTAACATTGGTAAGTTGGGTGTTGAGATAGGGAGGCAAGAAGAGAAGGTAAGTTCCAAAGGTGCTATTGTAGGACTACCATCTTCGCCTTTAGAGGTCATGGAGAGGAGGAGTGTGGTGAAGAAGAACACCATGGGGTGGAAGCTCATGGCGATAATTGACAGGATCATCACAAGGTGGAGATTAAAGAAGAGTCGTTGGGTGAGTGTGCTTTTAGGATGGCTACGGAGGCCTTGA

Coding sequence (CDS)

GCGTTGGCTGAGCAACCTGAGGATGCAGTTGCTTCAGTTGTTACGGAATTTTACTATGGCATCGAGGAAGGCAAGGATGTCTCAATTGTTAGAGGGCCATTTGATGAAATGCACATTGCTAAGGTCTTTTGTGGGCTAGGGATTGACTGGATCCACACAAATGGTGTGGCGATGCATCTTAGGGGGATAGATATAACTATCTCCAACCAGGTCTGGCATGCTGTCATTTGCGCCATGTTGATGCTTGTCACCCGTCTTCCTGAGGTGACCAAAGATAGAGTGCAGCTACTCTATTGTCTTAGCACAGACCGATCTGTTAACATTGGTAAGTTGGGTGTTGAGATAGGGAGGCAAGAAGAGAAGGTAAGTTCCAAAGGTGCTATTGTAGGACTACCATCTTCGCCTTTAGAGGTCATGGAGAGGAGGAGTGTGGTGAAGAAGAACACCATGGGGTGGAAGCTCATGGCGATAATTGACAGGATCATCACAAGGTGGAGATTAAAGAAGAGTCGTTGGGTGAGTGTGCTTTTAGGATGGCTACGGAGGCCTTGA

Protein sequence

ALAEQPEDAVASVVTEFYYGIEEGKDVSIVRGPFDEMHIAKVFCGLGIDWIHTNGVAMHLRGIDITISNQVWHAVICAMLMLVTRLPEVTKDRVQLLYCLSTDRSVNIGKLGVEIGRQEEKVSSKGAIVGLPSSPLEVMERRSVVKKNTMGWKLMAIIDRIITRWRLKKSRWVSVLLGWLRRP
Homology
[Close]
BLAST of ClCG06G009700 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-12
Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 0 

Query: 4   EQPEDAVASVVTEFYYGIEEGKDVSIVRG---PFD------------------------- 63
           +QPE AV S+V EFY  + EG   S VRG    FD                         
Sbjct: 72  KQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEH 131

Query: 64  -EMH-IAKVFCGLGIDWIHTNGVAMHLRGIDITISNQVWHAVICAMLMLVTRLPEVTKDR 112
            ++H I +  C  G +WI   G  +  +  ++T+SNQVWH  ICA L+ V     VTK+R
Sbjct: 132 VDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKER 191

[Close]
BLAST of ClCG06G009700 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-12
Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 0 

Query: 4   EQPEDAVASVVTEFYYGIEEGKDVSIVRG---PFD------------------------- 63
           +QPE AV S+V EFY  + EG   S VRG    FD                         
Sbjct: 10  KQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEH 69

Query: 64  -EMH-IAKVFCGLGIDWIHTNGVAMHLRGIDITISNQVWHAVICAMLMLVTRLPEVTKDR 112
            ++H I +  C  G +WI   G  +  +  ++T+SNQVWH  ICA L+ V     VTK+R
Sbjct: 70  VDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKER 129

[Close]
BLAST of ClCG06G009700 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 9.8e-12
Identity = 49/138 (35.51%), Postives = 69/138 (50.00%), Query Frame = 0 

Query: 4   EQPEDAVASVVTEFYYGIEEGKDVSIVRG---PFD------------------------- 63
           +QPE AV S+V EFY  + EG   S VRG    FD                         
Sbjct: 72  KQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEH 131

Query: 64  -EMH-IAKVFCGLGIDWIHTNGVAMHLRGIDITISNQVWHAVICAMLMLVTRLPEVTKDR 112
            ++H I +  C  G +W+   G  +  +  ++T+SNQVWH  ICA L+ V     VTK+R
Sbjct: 132 VDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKER 191

[Close]
BLAST of ClCG06G009700 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-12
Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 0 

Query: 4   EQPEDAVASVVTEFYYGIEEGKDVSIVRG---PFD------------------------- 63
           +QPE AV S+V EFY  + EG   S VRG    FD                         
Sbjct: 72  KQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEH 131

Query: 64  -EMH-IAKVFCGLGIDWIHTNGVAMHLRGIDITISNQVWHAVICAMLMLVTRLPEVTKDR 112
            ++H I +  C  G +WI   G  +  +  ++T+SNQVWH  ICA L+ V     VTK+R
Sbjct: 132 VDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKER 191

[Close]
BLAST of ClCG06G009700 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-12
Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 0 

Query: 4   EQPEDAVASVVTEFYYGIEEGKDVSIVRG---PFD------------------------- 63
           +QPE AV S+V EFY  + EG   S VRG    FD                         
Sbjct: 10  KQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEH 69

Query: 64  -EMH-IAKVFCGLGIDWIHTNGVAMHLRGIDITISNQVWHAVICAMLMLVTRLPEVTKDR 112
            ++H I +  C  G +WI   G  +  +  ++T+SNQVWH  ICA L+ V     VTK+R
Sbjct: 70  VDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKER 129

[Close]
BLAST of ClCG06G009700 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-12
Identity = 49/138 (35.51%), Postives = 69/138 (50.00%), Query Frame = 0 

Query: 4   EQPEDAVASVVTEFYYGIEEGKDVSIVRG---PFD------------------------- 63
           +QPE AV S+V EFY  + EG   S VRG    FD                         
Sbjct: 72  KQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEH 131

Query: 64  -EMH-IAKVFCGLGIDWIHTNGVAMHLRGIDITISNQVWHAVICAMLMLVTRLPEVTKDR 112
            ++H I +  C  G +W+   G  +  +  ++T+SNQVWH  ICA L+ V     VTK+R
Sbjct: 132 VDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKER 191

The following BLAST results are available for this feature:
BLAST of ClCG06G009700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0033353.15.7e-1236.23putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... [more]
XP_008458668.15.7e-1236.23PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo][more]
KGN46897.19.8e-1235.51hypothetical protein Csa_020731 [Cucumis sativus][more]
BLAST of ClCG06G009700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG06G009700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BBY32.8e-1236.23Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw... [more]
A0A1S3C7Y02.8e-1236.23uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=... [more]
A0A0A0KER14.7e-1235.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1[more]
BLAST of ClCG06G009700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G009700.1ClCG06G009700.1mRNA