ClCG06G008335 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G008335
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	30S ribosomal protein S4, chloroplastic
Location	CG_Chr06: 11863571 .. 11864265 (-)
RNA-Seq Expression	ClCG06G008335
Synteny	ClCG06G008335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGTAACATTTTTGTTATGTGAGCTCGCTTAGCTCAGAGGTTAGAGAATAGCATTACAAACGCGATTTTAAAATTATGTAAAAATCAAATAAATAAAGAAACAACTTCTTACCCTTTTTTCAAAGGTCACTGATCTATCATGTCATAGGAACTTTCTTTTATGACTAAAGGAGAGGTTCTATTTCTGTAGAACAAATCAAGAAAGGAACTCTTACTTTTGTATATCATTTACATATACAATAGGATCCGGATATTGATCCAAGTCATCTAATTATTCTTTGTTTTGTAGTACAATACTTCACTAGATTTCTCTTCATTTATCATATTTACCATTTAGTTTAGTTTTGATTTAGGTTTATGAAATTTAAATAAAATAAGGAGTCGTTATGTGGTGTTACAGAGGGCCTCGTTTAAAAAAATACATTGTCTGGGGGGTTTACCGGGACTAACTAGTAAAAGGCCGAAAACCGGAAATGATCTTAAAAACCAATCGTGTTCTGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTATGTTTTCATTATGGTCTTACGGAACGACAATTACTTAAATACGTTTGTATCACCGGAAAAGCCAAAGGATCAATAGGTCAAGTTTTACTACGATTACTTGAAATACGTTTGGATAGCATCCTTTTCGATTGTATATGGCTTTGA

mRNA sequence

ATGCATAGGGCCTCGTTTAAAAAAATACATTGTCTGGGGGGTTTACCGGGACTAACTAGTAAAAGGCCGAAAACCGGAAATGATCTTAAAAACCAATCGTGTTCTGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTATGTTTTCATTATGGTCTTACGGAACGACAATTACTTAAATACGTTTGTATCACCGGAAAAGCCAAAGGATCAATAGGTCAAGTTTTACTACGATTACTTGAAATACGTTTGGATAGCATCCTTTTCGATTGTATATGGCTTTGA

Coding sequence (CDS)

ATGCATAGGGCCTCGTTTAAAAAAATACATTGTCTGGGGGGTTTACCGGGACTAACTAGTAAAAGGCCGAAAACCGGAAATGATCTTAAAAACCAATCGTGTTCTGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTATGTTTTCATTATGGTCTTACGGAACGACAATTACTTAAATACGTTTGTATCACCGGAAAAGCCAAAGGATCAATAGGTCAAGTTTTACTACGATTACTTGAAATACGTTTGGATAGCATCCTTTTCGATTGTATATGGCTTTGA

Protein sequence

MHRASFKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKYVCITGKAKGSIGQVLLRLLEIRLDSILFDCIWL

Homology

[Close]

BLAST of ClCG06G008335 vs. NCBI nr
Match: YP_247601.1 (ribosomal protein S4 [Cucumis sativus] >Q4VZH3.1 RecName: Full=30S ribosomal protein S4, chloroplastic [Cucumis sativus] >CAJ00760.1 ribosomal protein S4 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 2.1e-32
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 3  RASFKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQL 62
          R  FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQL
Sbjct: 6  RPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQL 65

Query: 63 LKYVCITGKAKGSIGQVLLRLLEIRLDSILF 94
          LKYV I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 66 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. NCBI nr
Match: RZC45333.1 (hypothetical protein C5167_038300 [Papaver somniferum])

HSP 1 Score: 147.9 bits (372), Expect = 4.6e-32
Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK GNDL+NQSCSGKKSQYRIRLEEKQKL FHYG+TERQLLKY
Sbjct: 9  FKKIRRLGDLPGLTSKRPKAGNDLRNQSCSGKKSQYRIRLEEKQKLRFHYGMTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. NCBI nr
Match: YP_009317388.1 (ribosomal protein S4 [Coccinia grandis] >AOX48752.1 ribosomal protein S4 [Coccinia grandis] >AOX48837.1 ribosomal protein S4 [Coccinia grandis])

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. NCBI nr
Match: AHM88823.1 (ribosomal protein S4 [Lagenaria siceraria])

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. NCBI nr
Match: QJR52958.1 (ribosomal protein S4 [Herpetospermum pedunculosum])

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy Swiss-Prot
Match: Q4VZH3 (30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.7e-35
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 3  RASFKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQL 62
          R  FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQL
Sbjct: 6  RPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQL 65

Query: 63 LKYVCITGKAKGSIGQVLLRLLEIRLDSILF 94
          LKYV I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 66 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy Swiss-Prot
Match: A4QKA7 (30S ribosomal protein S4, chloroplastic OS=Barbarea verna OX=50458 GN=rps4 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-33
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy Swiss-Prot
Match: A4QLA8 (30S ribosomal protein S4, chloroplastic OS=Lepidium virginicum OX=59292 GN=rps4 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-33
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy Swiss-Prot
Match: A4QLT5 (30S ribosomal protein S4, chloroplastic OS=Nasturtium officinale OX=65948 GN=rps4 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-33
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy Swiss-Prot
Match: A4QJB7 (30S ribosomal protein S4, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rps4 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.6e-33
Identity = 73/88 (82.95%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRP+ G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy TrEMBL
Match: A0A4Y7I8R6 (Uncharacterized protein ycf72 OS=Papaver somniferum OX=3469 GN=C5167_038300 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32
Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK GNDL+NQSCSGKKSQYRIRLEEKQKL FHYG+TERQLLKY
Sbjct: 9  FKKIRRLGDLPGLTSKRPKAGNDLRNQSCSGKKSQYRIRLEEKQKLRFHYGMTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy TrEMBL
Match: A0A218KG36 (30S ribosomal protein S4, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy TrEMBL
Match: A0A1X9Q1U9 (30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy TrEMBL
Match: A0A249RZ87 (30S ribosomal protein S4, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. ExPASy TrEMBL
Match: A0A1S4EU11 (30S ribosomal protein S4, chloroplastic OS=Cucumis melo OX=3656 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of ClCG06G008335 vs. TAIR 10
Match: ATCG00380.1 (chloroplast ribosomal protein S4 )

HSP 1 Score: 137.1 bits (344), Expect = 7.5e-33
Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS S KKSQYRIRLEEKQKL FHYGLTE QLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSVKKSQYRIRLEEKQKLRFHYGLTEHQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

The following BLAST results are available for this feature:

BLAST of ClCG06G008335 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_247601.1	2.1e-32	85.71	ribosomal protein S4 [Cucumis sativus] >Q4VZH3.1 RecName: Full=30S ribosomal pro...	[more]
RZC45333.1	4.6e-32	85.23	hypothetical protein C5167_038300 [Papaver somniferum]	[more]
YP_009317388.1	6.0e-32	87.50	ribosomal protein S4 [Coccinia grandis] >AOX48752.1 ribosomal protein S4 [Coccin...	[more]
AHM88823.1	6.0e-32	87.50	ribosomal protein S4 [Lagenaria siceraria]	[more]
QJR52958.1	6.0e-32	87.50	ribosomal protein S4 [Herpetospermum pedunculosum]	[more]

BLAST of ClCG06G008335 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH3	2.7e-35	85.71	30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 ...	[more]
A4QKA7	2.5e-33	84.09	30S ribosomal protein S4, chloroplastic OS=Barbarea verna OX=50458 GN=rps4 PE=3 ...	[more]
A4QLA8	2.5e-33	84.09	30S ribosomal protein S4, chloroplastic OS=Lepidium virginicum OX=59292 GN=rps4 ...	[more]
A4QLT5	2.5e-33	84.09	30S ribosomal protein S4, chloroplastic OS=Nasturtium officinale OX=65948 GN=rps...	[more]
A4QJB7	5.6e-33	82.95	30S ribosomal protein S4, chloroplastic OS=Aethionema cordifolium OX=434059 GN=r...	[more]

BLAST of ClCG06G008335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y7I8R6	2.2e-32	85.23	Uncharacterized protein ycf72 OS=Papaver somniferum OX=3469 GN=C5167_038300 PE=3...	[more]
A0A218KG36	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis sativus var. hardwickii OX=31...	[more]
A0A1X9Q1U9	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 ...	[more]
A0A249RZ87	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis melo var. cantalupensis OX=36...	[more]
A0A1S4EU11	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis melo OX=3656 GN=rps4 PE=3 SV=...	[more]

BLAST of ClCG06G008335 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00380.1	7.5e-33	81.82	chloroplast ribosomal protein S4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 19..85 e-value: 1.9E-6 score: 37.5
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 26..85 e-value: 2.8E-15 score: 57.0
None	No IPR available	GENE3D	1.10.1050.10	Ribosomal Protein S4 Delta 41; Chain A, domain 1	coord: 1..97 e-value: 7.8E-26 score: 92.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..33
None	No IPR available	PANTHER	PTHR11831:SF35	30S RIBOSOMAL PROTEIN S4, CHLOROPLASTIC	coord: 5..93
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 6..95
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 5..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G008335.1	ClCG06G008335.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome