ClCG06G007960 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G007960
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Serine hydroxymethyltransferase
Location	CG_Chr06: 10348398 .. 10351273 (+)
RNA-Seq Expression	ClCG06G007960
Synteny	ClCG06G007960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTCTTCTTCTTCTCAAATTTTTCTCTGACGTCAGTCATGGATTCTGTCAATTCTTGGGGCAACACTCCTCTCAGCACAGTCGACCCTGAGATTTTCGATCTCATCGAGAAGGAGAAGCGTCGACAATGCCGCGGAATCGAGCTCATTGCTTCTGAGAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGCAGCGCCTTGACCAACAAGTACTCCGAGGGCATGCCGGGAAATCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTAGAGCTCTCGAGGCCTTCCATGTCGATCCGGCGAAATGGGGTGTTAATGTCCAGCCCTACTCTGGTTCGCCGGCGAATTTCGCCGCTTACACCGCCTTGCTTCAGCCACATGACCGGATTATGGGGCTGGATCTTCCTTCTGGTGGCCATTTGACGCATGGTTACTACACCTCCGGTGGAAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCACCACTGGATATATTGACTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATCATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCTCTTCTTCTCTGTGATATGGCGCACATTAGTGGACTCGTTGCTGCTCAGGTATATACATATAAACGAAACAAATCTATGAATCGTGTTCATATCTTTTGTCATTTTGTCTTCCAAATGTTGGCAATTAGATGTTTTCCATTTCTGGATATTGGATCTGCTAGTTTATGTTGAATTTTCTTTCTCTTCGATCTATGCGAATGATATGCTTGATTTGTTCATACTTCTCCTTCGTATCTGTGTTCGGTGTTCAGTGCATTGATTAGGAGTTGTTATAGAAATGTCACAGGGTTTTAGATCCATAATTGTTTGAGCATCTTACGTAACAGAATCTAGATTTTTTTAAACTTATTTAATGACTAATTTTGTATGCTACATAGCTTCTTTGTAATGGATTGTGTTCTTTGGATTGATTGAACCGCCATGTTTCTCATTGTGTCGGACAAATATTTTGCATTCTTTGTCTTTAAGATTCAGTTTTAAATGCTAGATTTAACATTGAAATGAAGATGTACTTAGAGGAAATGGATGCATTTCTGCATCTTGTAGAATTCAGTTTAATTGTAAAACAAATCCTGGATTCAATAATCCTTTTGTTTTGGACTTACATTACGATGTCGGTGACTTGTGTCAAAATTGATAAATCAGCTTGAATCTATCTTTAGTATTCTCTTATTTATTACCCGTGTCATAGTATTTAGGCAGAATATGGTCACTCATTGTTACTACCAAACTGAAGGCATATTCTTCCAAGACATTATGATTGTTTTTGATCTCTGGTTTCTTTCCTTGCAACTTAAGCGATTTGGGTCTTGCTGGTATTGTGAAATATTAATGTCCAATGATTGTTTGCAGGAAGCTGCAAACCCGTTCGAGTATTGTGATGTTGTGACGACCACAACTCACAAGAGTTTGAGGGGTCCAAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCACCTAAGAAGGGTCAGCCTGAGGATGCTGTTTATGACTTTGAAGACAAGATCAACTTCTCTGTCTTCCCAGCCCTTCAGGGTGGCCCTCACAACCACCAAATTGGTGCTTTGGCTGTTGCCTTGAAGCAGGCCATGTCGCCCGGGTTCAAGGCCTATGCAAAACAAGTTAAGGCCAATGCCGTGGCCCTCGGAAATTACCTAATGAACAAGGGCTACAAGCTGGTCACAGGAGGAACCGAGAACCACCTTGTTCTCTGGGATCTTCGTCCTTTGGGATTGACTGGTAATTTCATGGCGAATCAACTTATGAAAAACCAACACGATATATAAGTCTACCAGTTTCGCTCGGCATCTATCTTTTAAGTCATTGATTTCATATTCAGAAGCGGTCTTTCTAACAGTGTTGCGGTCATTTATTTTGCAGGCAACAAGGTTGAGAAGCTTTGCGACTTGTGCAACATCACAGTAAACAAAAACGCAGTGTTCGGTGACAGCAGTGCATTGGCTCCCGGAGGTGTTCGAATTGGTAAGTACCGTATATCATTGGAGGATGATTCCATCATTCATAGTCCTTCCTTAACTTGTTTTTCCTGCAATCAAACCAACGAGTAAAGATTTCAAAAGTGTGATTAACAAGACATCAAATTGTGATGATATAATTAGGTGCACCTGCCATGACTTCAAGAGGGTTGGTCGAGAAAGACTTCGAACAGATCGCAGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAACATCCAAAAGGAATATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGAGCTCAAGGCCGACGTCGAGAAATTTTCCGGCTCTTTCGACATGCCGGGTTTCCTCATGTCCGAGATGAAGTACAAGGACTAGAAAGAAAAGCTAAACAACACAAGATCGTCTGGAAAGCTAATAAAGTTTTGGGTGTTTGTTGAATCTTTATAATCTTTCACTTCTAAAGTTGAAAAAGTAAAAAGAAAAGGTTGCTGTTTGTTTGGTTTCCTTTTTTTTCTTTTTATTGTTAATTTTTTTTCTTTCCTTCTGTAAGATGTAGACTAGATTTTCATTCGCATAATATTCATTCTAAAGTGTCATGCTGAGCCAGAAGTTTCGCACTAATAATCACTATCCTTTGTTTTATTTTTATTTTTTAAAATTTTAATATATGTGTGGGCTTGATATGGTGGAAGTTAGCCCAATTTGCA

mRNA sequence

CTTCTTCTTCTTCTTCTTCTTCTCAAATTTTTCTCTGACGTCAGTCATGGATTCTGTCAATTCTTGGGGCAACACTCCTCTCAGCACAGTCGACCCTGAGATTTTCGATCTCATCGAGAAGGAGAAGCGTCGACAATGCCGCGGAATCGAGCTCATTGCTTCTGAGAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGCAGCGCCTTGACCAACAAGTACTCCGAGGGCATGCCGGGAAATCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTAGAGCTCTCGAGGCCTTCCATGTCGATCCGGCGAAATGGGGTGTTAATGTCCAGCCCTACTCTGGTTCGCCGGCGAATTTCGCCGCTTACACCGCCTTGCTTCAGCCACATGACCGGATTATGGGGCTGGATCTTCCTTCTGGTGGCCATTTGACGCATGGTTACTACACCTCCGGTGGAAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCACCACTGGATATATTGACTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATCATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCTCTTCTTCTCTGTGATATGGCGCACATTAGTGGACTCGTTGCTGCTCAGGAAGCTGCAAACCCGTTCGAGTATTGTGATGTTGTGACGACCACAACTCACAAGAGTTTGAGGGGTCCAAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCACCTAAGAAGGGTCAGCCTGAGGATGCTGTTTATGACTTTGAAGACAAGATCAACTTCTCTGTCTTCCCAGCCCTTCAGGGTGGCCCTCACAACCACCAAATTGGTGCTTTGGCTGTTGCCTTGAAGCAGGCCATGTCGCCCGGGTTCAAGGCCTATGCAAAACAAGTTAAGGCCAATGCCGTGGCCCTCGGAAATTACCTAATGAACAAGGGCTACAAGCTGGTCACAGGAGGAACCGAGAACCACCTTGTTCTCTGGGATCTTCGTCCTTTGGGATTGACTGGCAACAAGGTTGAGAAGCTTTGCGACTTGTGCAACATCACAGTAAACAAAAACGCAGTGTTCGGTGACAGCAGTGCATTGGCTCCCGGAGGTGTTCGAATTGGTAAGTACCGTATATCATTGGAGGATGATTCCATCATTCATAGTGCACCTGCCATGACTTCAAGAGGGTTGGTCGAGAAAGACTTCGAACAGATCGCAGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAACATCCAAAAGGAATATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGAGCTCAAGGCCGACGTCGAGAAATTTTCCGGCTCTTTCGACATGCCGGGTTTCCTCATGTCCGAGATGAAGTACAAGGACTAGAAAGAAAAGCTAAACAACACAAGATCGTCTGGAAAGCTAATAAAGTTTTGGGTGTTTGTTGAATCTTTATAATCTTTCACTTCTAAAGTTGAAAAAGTAAAAAGAAAAGGTTGCTGTTTGTTTGGTTTCCTTTTTTTTCTTTTTATTGTTAATTTTTTTTCTTTCCTTCTGTAAGATGTAGACTAGATTTTCATTCGCATAATATTCATTCTAAAGTGTCATGCTGAGCCAGAAGTTTCGCACTAATAATCACTATCCTTTGTTTTATTTTTATTTTTTAAAATTTTAATATATGTGTGGGCTTGATATGGTGGAAGTTAGCCCAATTTGCA

Coding sequence (CDS)

ATGGATTCTGTCAATTCTTGGGGCAACACTCCTCTCAGCACAGTCGACCCTGAGATTTTCGATCTCATCGAGAAGGAGAAGCGTCGACAATGCCGCGGAATCGAGCTCATTGCTTCTGAGAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGCAGCGCCTTGACCAACAAGTACTCCGAGGGCATGCCGGGAAATCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTAGAGCTCTCGAGGCCTTCCATGTCGATCCGGCGAAATGGGGTGTTAATGTCCAGCCCTACTCTGGTTCGCCGGCGAATTTCGCCGCTTACACCGCCTTGCTTCAGCCACATGACCGGATTATGGGGCTGGATCTTCCTTCTGGTGGCCATTTGACGCATGGTTACTACACCTCCGGTGGAAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCACCACTGGATATATTGACTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATCATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCTCTTCTTCTCTGTGATATGGCGCACATTAGTGGACTCGTTGCTGCTCAGGAAGCTGCAAACCCGTTCGAGTATTGTGATGTTGTGACGACCACAACTCACAAGAGTTTGAGGGGTCCAAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCACCTAAGAAGGGTCAGCCTGAGGATGCTGTTTATGACTTTGAAGACAAGATCAACTTCTCTGTCTTCCCAGCCCTTCAGGGTGGCCCTCACAACCACCAAATTGGTGCTTTGGCTGTTGCCTTGAAGCAGGCCATGTCGCCCGGGTTCAAGGCCTATGCAAAACAAGTTAAGGCCAATGCCGTGGCCCTCGGAAATTACCTAATGAACAAGGGCTACAAGCTGGTCACAGGAGGAACCGAGAACCACCTTGTTCTCTGGGATCTTCGTCCTTTGGGATTGACTGGCAACAAGGTTGAGAAGCTTTGCGACTTGTGCAACATCACAGTAAACAAAAACGCAGTGTTCGGTGACAGCAGTGCATTGGCTCCCGGAGGTGTTCGAATTGGTAAGTACCGTATATCATTGGAGGATGATTCCATCATTCATAGTGCACCTGCCATGACTTCAAGAGGGTTGGTCGAGAAAGACTTCGAACAGATCGCAGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAACATCCAAAAGGAATATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGAGCTCAAGGCCGACGTCGAGAAATTTTCCGGCTCTTTCGACATGCCGGGTTTCCTCATGTCCGAGATGAAGTACAAGGACTAG

Protein sequence

MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFEQIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSEMKYKD

Homology

[Close]

BLAST of ClCG06G007960 vs. NCBI nr
Match: XP_038875387.1 (serine hydroxymethyltransferase 4 [Benincasa hispida])

HSP 1 Score: 952.6 bits (2461), Expect = 1.3e-273
Identity = 464/485 (95.67%), Postives = 470/485 (96.91%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+SVN+WGNTPL+TVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MESVNAWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRAL+AFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG               PAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------TPAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLN+QKE+GKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNVQKEHGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. NCBI nr
Match: XP_008457222.1 (PREDICTED: serine hydroxymethyltransferase 4 [Cucumis melo] >KAA0033337.1 serine hydroxymethyltransferase 4 [Cucumis melo var. makuwa] >TYK21570.1 serine hydroxymethyltransferase 4 [Cucumis melo var. makuwa])

HSP 1 Score: 948.0 bits (2449), Expect = 3.3e-272
Identity = 463/485 (95.46%), Postives = 466/485 (96.08%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MD VN WGNTPL+TVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRAL+AF  DP KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFRCDPTKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. NCBI nr
Match: XP_004138967.1 (serine hydroxymethyltransferase 4 [Cucumis sativus] >KGN61489.1 hypothetical protein Csa_006275 [Cucumis sativus])

HSP 1 Score: 947.6 bits (2448), Expect = 4.2e-272
Identity = 461/485 (95.05%), Postives = 467/485 (96.29%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MD VN WGNTPL+TVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRAL+AFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLN+QKEYGKLLKDFNKGLVNNKEIE+LKADVEKFSGSFDMPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. NCBI nr
Match: XP_022138598.1 (serine hydroxymethyltransferase 4 [Momordica charantia])

HSP 1 Score: 944.1 bits (2439), Expect = 4.7e-271
Identity = 461/485 (95.05%), Postives = 464/485 (95.67%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+ VN+WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVNAWGNTPLKAVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALEAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHADPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNK+IE LKADVEKFSGSFDMPGF MSE
Sbjct: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKDIEGLKADVEKFSGSFDMPGFAMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. NCBI nr
Match: XP_022959093.1 (serine hydroxymethyltransferase 4-like [Cucurbita moschata] >KAG6574849.1 Serine hydroxymethyltransferase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 941.0 bits (2431), Expect = 4.0e-270
Identity = 459/485 (94.64%), Postives = 465/485 (95.88%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MD VN+WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE+AVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLN+QKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. ExPASy Swiss-Prot
Match: O23254 (Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=SHM4 PE=1 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 9.5e-259
Identity = 434/485 (89.48%), Postives = 455/485 (93.81%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+ V+SWGNT L +VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFIDEIENLCRSRALEAFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+ TTGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYARFRAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFK YAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QI EFL RAVT+TL+IQK YGKLLKDFNKGLVNNK++++LKADVEKFS S++MPGFLMSE
Sbjct: 421 QIGEFLSRAVTLTLDIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. ExPASy Swiss-Prot
Match: Q9SVM4 (Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=SHM5 PE=3 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 2.4e-233
Identity = 386/482 (80.08%), Postives = 429/482 (89.00%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+ V SWGNT L  VDPEI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFIDEIE+LCRSR+LEAFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TGYIDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDYARFRA+ADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M+P FK YAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG               PAMTSRGLVEKDFE
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIG--------------TPAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           +I EFLHRAVTITL+IQ++YGK++KDFNKGLVNNKEI+E+KADVE+F+  FDMPGF +SE
Sbjct: 421 KIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISE 468

Query: 481 MK 483
            +
Sbjct: 481 SR 468

[Close]

BLAST of ClCG06G007960 vs. ExPASy Swiss-Prot
Match: Q84WV0 (Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=SHM7 PE=2 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 5.4e-177
Identity = 295/481 (61.33%), Postives = 371/481 (77.13%), Query Frame = 0


Query: 3   SVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEG 62
           +V +WG+ P+   DP+I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEG
Sbjct: 129 AVRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEG 188

Query: 63  MPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHD 122
           MPG RYY GN++ID+IENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +
Sbjct: 189 MPGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGE 248

Query: 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDFRP 182
           RIMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TGYIDYDKLE+KALD+RP
Sbjct: 249 RIMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRP 308

Query: 183 KLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTT 242
           K++ICGGS+YPRDWD+AR R IADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TT
Sbjct: 309 KILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTT 368

Query: 243 HKSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIG 302
           HK LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I 
Sbjct: 369 HKGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIA 428

Query: 303 ALAVALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTG 362
           ALA+ALKQ  +P +KAY +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG
Sbjct: 429 ALAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTG 488

Query: 363 NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEK 422
              EK+C++C+IT+NK A+FGD+  ++PGGVRIG               PAMT+RG +E 
Sbjct: 489 KVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIG--------------TPAMTTRGCIES 548

Query: 423 DFEQIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFL 479
           DFE +A+FL +A  IT  +Q+E+GK  K+F K L  NK+I EL+  VE F+  ++MP  L
Sbjct: 549 DFETMADFLIKAAQITSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASL 595

[Close]

BLAST of ClCG06G007960 vs. ExPASy Swiss-Prot
Match: Q9LM59 (Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=SHM6 PE=2 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 5.0e-175
Identity = 296/480 (61.67%), Postives = 369/480 (76.88%), Query Frame = 0


Query: 4   VNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 63
           V +WGN  +   DPEI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TGYIDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR IADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA SP +K Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKD 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG              +PAMTSRG +E +
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIG--------------SPAMTSRGCLEPE 553

Query: 424 FEQIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLM 479
           FE +A+FL+RA  I    Q+E+GKL K+  K + + KEI +L+  VE F+  F MP F M
Sbjct: 554 FETMADFLYRAAQIASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of ClCG06G007960 vs. ExPASy Swiss-Prot
Match: Q54Z26 (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=shmt1 PE=1 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 5.2e-172
Identity = 301/468 (64.32%), Postives = 363/468 (77.56%), Query Frame = 0


Query: 8   GNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNR 67
           GNTPL  VD EIF+L+ +EK RQ +G+ELIASENFTS AV+EALGS  TNKY+EG PG+R
Sbjct: 6   GNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSR 65

Query: 68  YYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGL 127
           YYGG E +DE+E LC+ RAL+AF +D +KWGVNVQPYSGSPANFA YTALL+PHDRIMGL
Sbjct: 66  YYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGL 125

Query: 128 DLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDFRPKLIIC 187
           DLPSGGHLTHGY T   KKISA+SI+FES+PY++    G IDY +LEE AL F+PKLII 
Sbjct: 126 DLPSGGHLTHGYQTD-KKKISASSIFFESMPYQI-GADGLIDYQRLEENALLFKPKLIIS 185

Query: 188 GGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLR 247
           G SAYPR+WDY R RAIADK GA L+CDMAH SGLVAAQ   +PF+YCDVVT+TTHK+LR
Sbjct: 186 GASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLR 245

Query: 248 GPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAM 307
           GPR+G+IF+R+G +    G+ E   YD E KINF+VFP+LQGGPH + I  +AVALK+A 
Sbjct: 246 GPRSGIIFFRRGKRVDGNGK-EIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEAD 305

Query: 308 SPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLC 367
           S  FK YA QVK NA A+GN LMNKGYKLVT GT+NHL+LWDLRP  LTGNK EK  D+ 
Sbjct: 306 SQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIA 365

Query: 368 NITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFEQIAEFLH 427
           NITVNKNAV GD++A++PGG+RIG              + A+TSRGL E DFE+IA+FL 
Sbjct: 366 NITVNKNAVHGDTNAISPGGIRIG--------------SSALTSRGLKEADFEKIADFLD 425

Query: 428 RAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPG 476
           R V+I+L IQ   GK L DF   +  +KE+ +L+ +VE+FS  F +PG
Sbjct: 426 RIVSISLEIQGRVGKKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPG 456

[Close]

BLAST of ClCG06G007960 vs. ExPASy TrEMBL
Match: A0A5A7SVK0 (Serine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00690 PE=3 SV=1)

HSP 1 Score: 948.0 bits (2449), Expect = 1.6e-272
Identity = 463/485 (95.46%), Postives = 466/485 (96.08%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MD VN WGNTPL+TVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRAL+AF  DP KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFRCDPTKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. ExPASy TrEMBL
Match: A0A1S3C536 (Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=6F11 PE=3 SV=1)

HSP 1 Score: 948.0 bits (2449), Expect = 1.6e-272
Identity = 463/485 (95.46%), Postives = 466/485 (96.08%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MD VN WGNTPL+TVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRAL+AF  DP KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFRCDPTKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. ExPASy TrEMBL
Match: A0A0A0LKC8 (Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G145880 PE=3 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 2.1e-272
Identity = 461/485 (95.05%), Postives = 467/485 (96.29%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MD VN WGNTPL+TVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRAL+AFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLN+QKEYGKLLKDFNKGLVNNKEIE+LKADVEKFSGSFDMPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. ExPASy TrEMBL
Match: A0A6J1CDF6 (Serine hydroxymethyltransferase OS=Momordica charantia OX=3673 GN=LOC111009716 PE=3 SV=1)

HSP 1 Score: 944.1 bits (2439), Expect = 2.3e-271
Identity = 461/485 (95.05%), Postives = 464/485 (95.67%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+ VN+WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVNAWGNTPLKAVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALEAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHADPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNK+IE LKADVEKFSGSFDMPGF MSE
Sbjct: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKDIEGLKADVEKFSGSFDMPGFAMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. ExPASy TrEMBL
Match: A0A6J1H4Y7 (Serine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111460192 PE=3 SV=1)

HSP 1 Score: 941.0 bits (2431), Expect = 1.9e-270
Identity = 459/485 (94.64%), Postives = 465/485 (95.88%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MD VN+WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE+AVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QIAEFLHRAVTITLN+QKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSE
Sbjct: 421 QIAEFLHRAVTITLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. TAIR 10
Match: AT4G13930.1 (serine hydroxymethyltransferase 4 )

HSP 1 Score: 893.6 bits (2308), Expect = 6.8e-260
Identity = 434/485 (89.48%), Postives = 455/485 (93.81%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+ V+SWGNT L +VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFIDEIENLCRSRALEAFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+ TTGYIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYARFRAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFK YAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIG              APAMTSRGLVEKDFE
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIG--------------APAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           QI EFL RAVT+TL+IQK YGKLLKDFNKGLVNNK++++LKADVEKFS S++MPGFLMSE
Sbjct: 421 QIGEFLSRAVTLTLDIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSE 471

Query: 481 MKYKD 486
           MKYKD
Sbjct: 481 MKYKD 471

[Close]

BLAST of ClCG06G007960 vs. TAIR 10
Match: AT4G13890.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein )

HSP 1 Score: 809.3 bits (2089), Expect = 1.7e-234
Identity = 386/482 (80.08%), Postives = 429/482 (89.00%), Query Frame = 0


Query: 1   MDSVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+ V SWGNT L  VDPEI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFIDEIE+LCRSR+LEAFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TGYIDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDYARFRA+ADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M+P FK YAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFE 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG               PAMTSRGLVEKDFE
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIG--------------TPAMTSRGLVEKDFE 420

Query: 421 QIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSE 480
           +I EFLHRAVTITL+IQ++YGK++KDFNKGLVNNKEI+E+KADVE+F+  FDMPGF +SE
Sbjct: 421 KIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISE 468

Query: 481 MK 483
            +
Sbjct: 481 SR 468

[Close]

BLAST of ClCG06G007960 vs. TAIR 10
Match: AT1G36370.1 (serine hydroxymethyltransferase 7 )

HSP 1 Score: 622.1 bits (1603), Expect = 3.8e-178
Identity = 295/481 (61.33%), Postives = 371/481 (77.13%), Query Frame = 0


Query: 3   SVNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEG 62
           +V +WG+ P+   DP+I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEG
Sbjct: 129 AVRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEG 188

Query: 63  MPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHD 122
           MPG RYY GN++ID+IENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +
Sbjct: 189 MPGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGE 248

Query: 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDFRP 182
           RIMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TGYIDYDKLE+KALD+RP
Sbjct: 249 RIMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRP 308

Query: 183 KLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTT 242
           K++ICGGS+YPRDWD+AR R IADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TT
Sbjct: 309 KILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTT 368

Query: 243 HKSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIG 302
           HK LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I 
Sbjct: 369 HKGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIA 428

Query: 303 ALAVALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTG 362
           ALA+ALKQ  +P +KAY +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG
Sbjct: 429 ALAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTG 488

Query: 363 NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEK 422
              EK+C++C+IT+NK A+FGD+  ++PGGVRIG               PAMT+RG +E 
Sbjct: 489 KVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIG--------------TPAMTTRGCIES 548

Query: 423 DFEQIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFL 479
           DFE +A+FL +A  IT  +Q+E+GK  K+F K L  NK+I EL+  VE F+  ++MP  L
Sbjct: 549 DFETMADFLIKAAQITSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASL 595

[Close]

BLAST of ClCG06G007960 vs. TAIR 10
Match: AT1G22020.1 (serine hydroxymethyltransferase 6 )

HSP 1 Score: 615.5 bits (1586), Expect = 3.6e-176
Identity = 296/480 (61.67%), Postives = 369/480 (76.88%), Query Frame = 0


Query: 4   VNSWGNTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 63
           V +WGN  +   DPEI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TGYIDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR IADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA SP +K Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKD 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG              +PAMTSRG +E +
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIG--------------SPAMTSRGCLEPE 553

Query: 424 FEQIAEFLHRAVTITLNIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLM 479
           FE +A+FL+RA  I    Q+E+GKL K+  K + + KEI +L+  VE F+  F MP F M
Sbjct: 554 FETMADFLYRAAQIASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of ClCG06G007960 vs. TAIR 10
Match: AT4G37930.1 (serine transhydroxymethyltransferase 1 )

HSP 1 Score: 553.1 bits (1424), Expect = 2.2e-157
Identity = 278/482 (57.68%), Postives = 351/482 (72.82%), Query Frame = 0


Query: 9   NTPLSTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 68
           N PL  VDPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 52  NAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 111

Query: 69  YGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 128
           YGGNE+ID  E LC+ RALEAF +DP KWGVNVQP SGSPANF  YTALL+PH+RIM LD
Sbjct: 112 YGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALD 171

Query: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDFRPKLIICG 188
           LP GGHL+HGY T   KKISA SI+FE++PY++D +TGYIDYD++E+ A  FRPKLI+ G
Sbjct: 172 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAG 231

Query: 189 GSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 248
            SAY R +DYAR R + +K  A++L DMAHISGLVAA    +PF+Y DVVTTTTHKSLRG
Sbjct: 232 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRG 291

Query: 249 PRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMS 308
           PR  MIF+RKG K   K Q ++ +YDFEDKIN +VFP LQGGPHNH I  LAVALKQA +
Sbjct: 292 PRGAMIFFRKGVKEINK-QGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATT 351

Query: 309 PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCN 368
             +KAY +QV +N+      LM +GY+LV+GGT+NHLVL +L+P G+ G++VEK+ +  +
Sbjct: 352 SEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVH 411

Query: 369 ITVNKNAVFGDSSALAPGGVRIGKYRISLEDDSIIHSAPAMTSRGLVEKDFEQIAEFLHR 428
           I  NKN V GD SA+ PGG+R+G               PA+TSRG VE+DF ++AE+  +
Sbjct: 412 IASNKNTVPGDVSAMVPGGIRMG--------------TPALTSRGFVEEDFAKVAEYFDK 471

Query: 429 AVTITLNIQKE-YGKLLKDFNKGLVNN----KEIEELKADVEKFSGSFDMPGFLMSEMKY 486
           AVTI L ++ E  G  LKDF   + ++     EI +L+ +VE+F+  F   GF    MKY
Sbjct: 472 AVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKY 517

The following BLAST results are available for this feature:

BLAST of ClCG06G007960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875387.1	1.3e-273	95.67	serine hydroxymethyltransferase 4 [Benincasa hispida]	[more]
XP_008457222.1	3.3e-272	95.46	PREDICTED: serine hydroxymethyltransferase 4 [Cucumis melo] >KAA0033337.1 serine...	[more]
XP_004138967.1	4.2e-272	95.05	serine hydroxymethyltransferase 4 [Cucumis sativus] >KGN61489.1 hypothetical pro...	[more]
XP_022138598.1	4.7e-271	95.05	serine hydroxymethyltransferase 4 [Momordica charantia]	[more]
XP_022959093.1	4.0e-270	94.64	serine hydroxymethyltransferase 4-like [Cucurbita moschata] >KAG6574849.1 Serine...	[more]

BLAST of ClCG06G007960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23254	9.5e-259	89.48	Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=SHM4 PE=1 S...	[more]
Q9SVM4	2.4e-233	80.08	Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=SHM5 PE=3 S...	[more]
Q84WV0	5.4e-177	61.33	Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=SHM7 PE=2 S...	[more]
Q9LM59	5.0e-175	61.67	Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=SHM6 PE=2 S...	[more]
Q54Z26	5.2e-172	64.32	Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=shmt1 ...	[more]

BLAST of ClCG06G007960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVK0	1.6e-272	95.46	Serine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C536	1.6e-272	95.46	Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=6F11 PE=3 SV=1	[more]
A0A0A0LKC8	2.1e-272	95.05	Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G145880 PE=3 ...	[more]
A0A6J1CDF6	2.3e-271	95.05	Serine hydroxymethyltransferase OS=Momordica charantia OX=3673 GN=LOC111009716 P...	[more]
A0A6J1H4Y7	1.9e-270	94.64	Serine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111460192 PE...	[more]

BLAST of ClCG06G007960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13930.1	6.8e-260	89.48	serine hydroxymethyltransferase 4	[more]
AT4G13890.1	1.7e-234	80.08	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT1G36370.1	3.8e-178	61.33	serine hydroxymethyltransferase 7	[more]
AT1G22020.1	3.6e-176	61.67	serine hydroxymethyltransferase 6	[more]
AT4G37930.1	2.2e-157	57.68	serine transhydroxymethyltransferase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015422	Pyridoxal phosphate-dependent transferase, small domain	GENE3D	3.90.1150.10	Aspartate Aminotransferase, domain 1	coord: 16..474 e-value: 3.4E-209 score: 696.7
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 41..316 e-value: 3.4E-209 score: 696.7
IPR001085	Serine hydroxymethyltransferase	PIRSF	PIRSF000412	SHMT	coord: 1..480 e-value: 7.8E-183 score: 605.7
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..484
IPR001085	Serine hydroxymethyltransferase	HAMAP	MF_00051	SHMT	coord: 11..475 score: 41.377987
IPR001085	Serine hydroxymethyltransferase	CDD	cd00378	SHMT	coord: 15..467 e-value: 0.0 score: 611.514
IPR039429	Serine hydroxymethyltransferase-like domain	PFAM	PF00464	SHMT	coord: 12..425 e-value: 3.6E-186 score: 618.5
None	No IPR available	PANTHER	PTHR11680:SF33	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..484
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	PROSITE	PS00096	SHMT	coord: 236..252
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 6..477

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G007960.1	ClCG06G007960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046655	folic acid metabolic process
biological_process	GO:0019264	glycine biosynthetic process from serine
biological_process	GO:0006565	L-serine catabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0035999	tetrahydrofolate interconversion
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0070905	serine binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity