ClCG06G004060 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG06G004060
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr06: 4636696 .. 4636962 (-)
RNA-Seq ExpressionClCG06G004060
SyntenyClCG06G004060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGATTCAAGGGAAACCTTGGAACTGTGATCATGATTGACGGAAAAGTTGGTGAAGAATCGATCCGACAATTGGAGCGTTGCAAAGAAGCGAGGGGAACGGTTCGAGACAATTATGTAGAGCTTCAACGGCGTAAATTTCACGTCGGCATCCTTCGAAATTTGAGCCAATAAGGAGGTTGCTTCCATAAGAGGTTCAAAGTCCGTGAGCTTGACGAAGAACATGGTGGTGGTAATGTGAAAAATGAAGGGGAAGGAGAATGA

mRNA sequence

ATGGAAGGATTCAAGGGAAACCTTGGAACTGTGATCATGATTGACGGAAAAGTTGGTGAAGAATCGATCCGACAATTGGAGCGTTGCAAAGAAGCGAGGGGAACGGTTCGAGACAATTATGTAGAGCTTCAACGGCGAGGTTGCTTCCATAAGAGGTTCAAAGTCCGTGAGCTTGACGAAGAACATGGTGGTGGTAATGTGAAAAATGAAGGGGAAGGAGAATGA

Coding sequence (CDS)

ATGGAAGGATTCAAGGGAAACCTTGGAACTGTGATCATGATTGACGGAAAAGTTGGTGAAGAATCGATCCGACAATTGGAGCGTTGCAAAGAAGCGAGGGGAACGGTTCGAGACAATTATGTAGAGCTTCAACGGCGAGGTTGCTTCCATAAGAGGTTCAAAGTCCGTGAGCTTGACGAAGAACATGGTGGTGGTAATGTGAAAAATGAAGGGGAAGGAGAATGA

Protein sequence

MEGFKGNLGTVIMIDGKVGEESIRQLERCKEARGTVRDNYVELQRRGCFHKRFKVRELDEEHGGGNVKNEGEGE
Homology
[Close]
BLAST of ClCG06G004060 vs. NCBI nr
Match: KGN45633.1 (hypothetical protein Csa_004946 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07
Identity = 37/69 (53.62%), Postives = 43/69 (62.32%), Query Frame = 0 

Query: 1  MEGFKGNLGTVIMIDGKVGEESIRQLERCKEARGTVRDNYVELQR--------------R 56
          ME FKGNLGT IMI  KVGE+S RQL+RC E RGTVR +Y E QR               
Sbjct: 1  MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG 60

[Close]
BLAST of ClCG06G004060 vs. ExPASy TrEMBL
Match: A0A0A0K829 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002280 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.3e-08
Identity = 37/69 (53.62%), Postives = 43/69 (62.32%), Query Frame = 0 

Query: 1  MEGFKGNLGTVIMIDGKVGEESIRQLERCKEARGTVRDNYVELQR--------------R 56
          ME FKGNLGT IMI  KVGE+S RQL+RC E RGTVR +Y E QR               
Sbjct: 1  MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG 60

The following BLAST results are available for this feature:
BLAST of ClCG06G004060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45633.11.7e-0753.62hypothetical protein Csa_004946 [Cucumis sativus][more]
BLAST of ClCG06G004060 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG06G004060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8298.3e-0853.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002280 PE=4 SV=1[more]
BLAST of ClCG06G004060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G004060.1ClCG06G004060.1mRNA