ClCG06G003080 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G003080
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	CG_Chr06: 3721294 .. 3721689 (+)
RNA-Seq Expression	ClCG06G003080
Synteny	ClCG06G003080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTCAAAATTCCGAATGCATTGGCTCTTGTAGTCTTGTTGAACATCCTAGCTTTAGCTTGTGTTTCATCTGCCAAACCGGGTTGCCCTCCGAAGGTTCGACCATCACCTGCTGCCACCCCAACGACGCAAGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGGAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTCGAGGCTGCATTGTGCTTGTGCACTGCGCTGAAAGCGAATGTGTTGGGTGTTGTCAGCCTTGATGTGCCTATTGCTCTTAGTTTGGTCGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAA

mRNA sequence

ATGGGGTTCAAAATTCCGAATGCATTGGCTCTTGTAGTCTTGTTGAACATCCTAGCTTTAGCTTGTGTTTCATCTGCCAAACCGGGTTGCCCTCCGAAGGTTCGACCATCACCTGCTGCCACCCCAACGACGCAAGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGGAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTCGAGGCTGCATTGTGCTTGTGCACTGCGCTGAAAGCGAATGTGTTGGGTGTTGTCAGCCTTGATGTGCCTATTGCTCTTAGTTTGGTCGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAA

Coding sequence (CDS)

ATGGGGTTCAAAATTCCGAATGCATTGGCTCTTGTAGTCTTGTTGAACATCCTAGCTTTAGCTTGTGTTTCATCTGCCAAACCGGGTTGCCCTCCGAAGGTTCGACCATCACCTGCTGCCACCCCAACGACGCAAGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGGAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTCGAGGCTGCATTGTGCTTGTGCACTGCGCTGAAAGCGAATGTGTTGGGTGTTGTCAGCCTTGATGTGCCTATTGCTCTTAGTTTGGTCGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAA

Protein sequence

MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

Homology

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BLAST of ClCG06G003080 vs. NCBI nr
Match: XP_008458132.1 (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo] >TYK14005.1 putative lipid-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58
Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 4   KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLG 63
           K    LALVVLLNI+ALACVSSAKP CPPKVRPSPA TPTTQAKCPKDTLKFGVCGSWLG
Sbjct: 5   KFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           LISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS
Sbjct: 65  LISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 124

Query: 124 IPQGFVCP 132
           IPQGFVCP
Sbjct: 125 IPQGFVCP 132

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BLAST of ClCG06G003080 vs. NCBI nr
Match: XP_004140487.1 (putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569.1 hypothetical protein Csa_005129 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58
Identity = 120/131 (91.60%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           M  K    LALVVLLNI+ALACVSS KP CPPKVRPSPA TP TQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

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BLAST of ClCG06G003080 vs. NCBI nr
Match: XP_038875568.1 (putative lipid-binding protein At4g00165 [Benincasa hispida])

HSP 1 Score: 235.7 bits (600), Expect = 2.2e-58
Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           MG KI  ALAL+VLLNILALACVSSAKPGCPPKVR SPA TPT QAKCPKDTLKFGVCGS
Sbjct: 1   MGLKILKALALIVLLNILALACVSSAKPGCPPKVRSSPATTPTMQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG V+LDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG-VNLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 130

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BLAST of ClCG06G003080 vs. NCBI nr
Match: XP_023000073.1 (putative lipid-binding protein At4g00165 [Cucurbita maxima])

HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57
Identity = 115/131 (87.79%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           MG +IP ALALV LLN++ALACVSSAKPGC PKV+PSPA TPT +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNVIALACVSSAKPGCSPKVQPSPATTPTAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

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BLAST of ClCG06G003080 vs. NCBI nr
Match: XP_023514898.1 (putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo] >KAG6593611.1 putative lipid-binding protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025958.1 putative lipid-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.3 bits (586), Expect = 9.4e-57
Identity = 115/131 (87.79%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           MG +IP ALALV LLNI+ALACVSSAKPGC PKV+PSPA TP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

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BLAST of ClCG06G003080 vs. ExPASy Swiss-Prot
Match: Q8RW93 (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g00165 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.5e-33
Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 4   KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLG 63
           K   +L +++LLNI          PG   K  P P A   T  KCP+DTLKFGVCGSWLG
Sbjct: 5   KALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           L+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NSCGK+
Sbjct: 65  LVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKN 124

Query: 124 IPQGFVC 131
           +PQGFVC
Sbjct: 125 VPQGFVC 128

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BLAST of ClCG06G003080 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 73/138 (52.90%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCP----PKVRPSPAATPT---TQAKCPKDTL 60
           MG K   ++AL   LNIL  A VSS +  CP    PK +P+P  TPT   +  KCP+D L
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEK-CPDPYKPKPKPTPKPTPTPYPSAGKCPRDAL 60

Query: 61  KFGVCGSWLGLI-SEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIA 120
           K GVC   L L+ +  IG+ P+  CCSLL GL +LEAA+CLCTA+KAN+LG  +L++PIA
Sbjct: 61  KLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNLNLPIA 120

Query: 121 LSLVVNSCGKSIPQGFVC 131
           LSLV+N+CGK +P GF C
Sbjct: 121 LSLVLNNCGKQVPNGFEC 136

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BLAST of ClCG06G003080 vs. ExPASy Swiss-Prot
Match: Q01595 (Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-21
Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 9   LALVVLLNILALACVSSAKPGCPPKVRPSPAATPT----TQAKCPKDTLKFGVCGSWLGL 68
           +AL + L++L  A     +P C   V P+P   PT    +  +CP D LK  VC   LGL
Sbjct: 5   VALFLALSLLFAATAHGCEPNCSGPVVPTPPVVPTPSSHSHGRCPIDALKLKVCAKVLGL 64

Query: 69  ISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSI 128
           +  ++G    ++CC LL GL DL+AALCLCTA+KANVLG + L+VP++L+ ++N+CG+  
Sbjct: 65  V--KVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLG-IHLNVPLSLNFILNNCGRIC 124

Query: 129 PQGFVCP 132
           P+ F CP
Sbjct: 125 PEDFTCP 128

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BLAST of ClCG06G003080 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-20
Identity = 53/110 (48.18%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 24  SSAKPGCP-PKVRP-SPAATPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSL 83
           S   P  P P  RP +P  TP +   CP D L+ GVC + L  L++ Q+G   ++ CCSL
Sbjct: 59  SVPSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSL 118

Query: 84  LTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC 131
           + GL DL+AA+CLCTAL+ANVLG ++L+VPI+LS+++N C + +P GF C
Sbjct: 119 IQGLVDLDAAICLCTALRANVLG-INLNVPISLSVLLNVCNRKVPSGFQC 167

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BLAST of ClCG06G003080 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-20
Identity = 67/161 (41.61%), Postives = 89/161 (55.28%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALA--------CVSSAKP-----------GCPPKVRPS---- 60
           M  K   +LAL   LNIL           C  S KP            CPP  RPS    
Sbjct: 1   MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60

Query: 61  ------PAATPTTQA-KCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEA 120
                 P  TP +    CP D LK GVC + L  L++ Q+G   S++CCSL+ GL D++A
Sbjct: 61  NPRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 120

Query: 121 ALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC 131
           A+CLCTAL+ANVLG ++L+VPI+LS+++N C + +P GF C
Sbjct: 121 AICLCTALRANVLG-INLNVPISLSVLLNVCNRKLPSGFQC 160

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BLAST of ClCG06G003080 vs. ExPASy TrEMBL
Match: A0A5D3CR05 (Putative lipid-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00020 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.3e-59
Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 4   KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLG 63
           K    LALVVLLNI+ALACVSSAKP CPPKVRPSPA TPTTQAKCPKDTLKFGVCGSWLG
Sbjct: 5   KFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           LISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS
Sbjct: 65  LISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 124

Query: 124 IPQGFVCP 132
           IPQGFVCP
Sbjct: 125 IPQGFVCP 132

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BLAST of ClCG06G003080 vs. ExPASy TrEMBL
Match: A0A1S3C8D8 (putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.3e-59
Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 4   KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLG 63
           K    LALVVLLNI+ALACVSSAKP CPPKVRPSPA TPTTQAKCPKDTLKFGVCGSWLG
Sbjct: 5   KFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           LISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS
Sbjct: 65  LISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 124

Query: 124 IPQGFVCP 132
           IPQGFVCP
Sbjct: 125 IPQGFVCP 132

[Close]

BLAST of ClCG06G003080 vs. ExPASy TrEMBL
Match: A0A0A0KCL7 (Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.3e-59
Identity = 120/131 (91.60%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           M  K    LALVVLLNI+ALACVSS KP CPPKVRPSPA TP TQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of ClCG06G003080 vs. ExPASy TrEMBL
Match: A0A6J1KLJ3 (putative lipid-binding protein At4g00165 OS=Cucurbita maxima OX=3661 GN=LOC111494374 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 115/131 (87.79%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           MG +IP ALALV LLN++ALACVSSAKPGC PKV+PSPA TPT +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNVIALACVSSAKPGCSPKVQPSPATTPTAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of ClCG06G003080 vs. ExPASy TrEMBL
Match: A0A6J1DWJ4 (putative lipid-binding protein At4g00165 OS=Momordica charantia OX=3673 GN=LOC111024153 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           MG ++  ALAL VLL IL LACVSSAK GCPPKVRPSPA  P  QAKCPKDTLKFGVCGS
Sbjct: 5   MGLRVSCALALAVLLTILGLACVSSAKSGCPPKVRPSPAGVPVVQAKCPKDTLKFGVCGS 64

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLI+EQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVV+LDVPIALSL+VNSC
Sbjct: 65  WLGLINEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVNLDVPIALSLLVNSC 124

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 125 GKSIPQGFVCP 135

[Close]

BLAST of ClCG06G003080 vs. TAIR 10
Match: AT4G00165.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 5.3e-34
Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 4   KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLG 63
           K   +L +++LLNI          PG   K  P P A   T  KCP+DTLKFGVCGSWLG
Sbjct: 5   KALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           L+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NSCGK+
Sbjct: 65  LVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKN 124

Query: 124 IPQGFVC 131
           +PQGFVC
Sbjct: 125 VPQGFVC 128

[Close]

BLAST of ClCG06G003080 vs. TAIR 10
Match: AT4G00165.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 5.3e-34
Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 4   KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLG 63
           K   +L +++LLNI          PG   K  P P A   T  KCP+DTLKFGVCGSWLG
Sbjct: 5   KALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           L+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NSCGK+
Sbjct: 65  LVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKN 124

Query: 124 IPQGFVC 131
           +PQGFVC
Sbjct: 125 VPQGFVC 128

[Close]

BLAST of ClCG06G003080 vs. TAIR 10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 4.4e-28
Identity = 67/134 (50.00%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAK----PGCPPKVRPSPAATPTTQAKCPKDTLKFG 60
           M  K     AL++ LN+L    V+S K       PPK   SP   P  +  CP DTLK G
Sbjct: 1   MASKALAVTALLITLNLLFFTFVTSTKCPPTTPKPPKTPKSPKKAPAVKPTCPTDTLKLG 60

Query: 61  VCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLV 120
           VC   LGL++  +G+ P   CC+LL GLA+LEAA+CLCTALKANVLG ++L+VPI L+L+
Sbjct: 61  VCADLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLG-INLNVPIDLTLL 120

Query: 121 VNSCGKSIPQGFVC 131
           +N CGK +P GF C
Sbjct: 121 LNYCGKKVPHGFQC 133

[Close]

BLAST of ClCG06G003080 vs. TAIR 10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           M  KI  +L + +  NIL     ++   GC    +P P   P +   CPKDTLK GVC +
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKP--KPKSTGSCPKDTLKLGVCAN 60

Query: 61  WL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNS 120
            L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++L+VP++LSL++N 
Sbjct: 61  VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-INLNVPVSLSLLLNV 120

Query: 121 CGKSIPQGFVC 131
           CGK +P GFVC
Sbjct: 121 CGKKVPSGFVC 128

[Close]

BLAST of ClCG06G003080 vs. TAIR 10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 1   MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGS 60
           M  KI  +L + +  NIL     ++   GC    +P P   P +   CPKDTLK GVC +
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKP--KPKSTGSCPKDTLKLGVCAN 60

Query: 61  WL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNS 120
            L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++L+VP++LSL++N 
Sbjct: 61  VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-INLNVPVSLSLLLNV 120

Query: 121 CGKSIPQGFVC 131
           CGK +P GFVC
Sbjct: 121 CGKKVPSGFVC 128

The following BLAST results are available for this feature:

BLAST of ClCG06G003080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458132.1	1.3e-58	93.75	PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo] >TYK14005.1 p...	[more]
XP_004140487.1	1.7e-58	91.60	putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569.1 hypotheti...	[more]
XP_038875568.1	2.2e-58	93.13	putative lipid-binding protein At4g00165 [Benincasa hispida]	[more]
XP_023000073.1	2.5e-57	87.79	putative lipid-binding protein At4g00165 [Cucurbita maxima]	[more]
XP_023514898.1	9.4e-57	87.79	putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo] >KAG659361...	[more]

BLAST of ClCG06G003080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RW93	7.5e-33	56.69	Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]
P14009	3.6e-27	52.90	14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
Q01595	1.0e-21	44.09	Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1	[more]
Q39176	4.3e-20	48.18	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]
Q9SU35	4.3e-20	41.61	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE...	[more]

BLAST of ClCG06G003080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CR05	6.3e-59	93.75	Putative lipid-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C8D8	6.3e-59	93.75	putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659...	[more]
A0A0A0KCL7	8.3e-59	91.60	Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=3 SV=1	[more]
A0A6J1KLJ3	1.2e-57	87.79	putative lipid-binding protein At4g00165 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1DWJ4	1.3e-56	87.79	putative lipid-binding protein At4g00165 OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of ClCG06G003080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00165.1	5.3e-34	56.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G00165.2	5.3e-34	56.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G45180.1	4.4e-28	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12520.1	1.3e-27	50.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12510.1	1.3e-27	50.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 48..130 e-value: 1.9E-5 score: 34.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 42..131 e-value: 1.7E-25 score: 90.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 51..131
IPR027923	Hydrophobic seed protein domain	PFAM	PF14547	Hydrophob_seed	coord: 47..131 e-value: 1.3E-25 score: 89.4
IPR027923	Hydrophobic seed protein domain	CDD	cd01958	HPS_like	coord: 46..130 e-value: 1.24039E-27 score: 95.4732
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 4..130
None	No IPR available	PANTHER	PTHR31731:SF28	PROLINE-RICH PROTEIN DC2.15	coord: 4..130
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..22 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G003080.1	ClCG06G003080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008289	lipid binding