ClCG06G003000 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G003000
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	PAP_fibrillin domain-containing protein
Location	CG_Chr06: 3593832 .. 3599252 (-)
RNA-Seq Expression	ClCG06G003000
Synteny	ClCG06G003000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATCCCTCTCCCTTCCATCGCTCCCTTTCATTTCCCCTTCTTCCATTACAACCCATCTGTCTCAGCTCCCCAAAATCTCTTGCTCTTCCATATCCATTCAATCTCAATCAGCCAAAGACGAGCTTCTCACTCTCATATCTGACCAGGAAAGAGGTCTCAAGACCCAGAAGAACCCTCGGAAACTTGCTTCAATTGTGAAATCAATCGACGCCTTGGCTTCTCTGGGCCGTAATTCTGTCACTACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTTATTTGTTTGGTACTCAAGCTGGCGACGTTTTGCAGGTGATTGATGTTGAGAAAAAAAGTCTCAATAATGTCATCACTTTTCCTCCACATGGGGTTTTCTTCGTTCGATCCAACATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAAGTATGTTCTCTCTGCATGTGCTTCTCTCGTTTGGATGAATTGCTTTTTGAATTCAATGGTTGTCTCTTGAAGTAATCAAATTAGTAATTTAGTACATAATGTTGATTTTAGAGGCTACTTAGTAAGCAATCTCAAATCTGTGGGAGAACTTAGCTCTAGTGTCAGAGGTTTTATAGAGGATTGTTTCATTTTGAGAGATAAATGTGAACCAACTTGGTTCTAAGTGGGCATGTTTTCATTTAAAACAATGTAAAGAGGTGCCTCAATCCAGAAGAGAGGGCAGTTTTATTCAAATTAACTAAAAGAAGAAATTTCAGCTTTTGTTATTTTGAAATTTCTTTGTATTGATCATCATGGCATCATCTGACTTAAAATCTTGCAAACCAAAAATCCTTTTTAGTCAAAGTGTAAAATGCTGGAAACAATAACTGAAAATTTGGATCTAAATCTTTACTTACCGATTCATGGTTCTGAATTAGGAAACAAAATGAGGTTTGAAACTAGTACCACTGACGATGAATTTGTAGGAAAAGACATACCGTGGTAGTAAAATCTTGAGTATACACTTTTATTGTTTCATTTGTCGAACTTTTTGTTTCAACTAAAATTTCAAGTGAAAAATATGGTATAGAAAGCAATTTGTCAACGATCCTTGTTGAACAATGGCCATATCTTATGAAACACGAAGACGTGACTCCATCTAAAGTAGACTATTTGGACTATTTTTCTTCTCTCTGCTAATTTCTCTGTAAAATTTGTGTGCAACTATCTATTCCAAAAAATTCTTTAATTTATGGTTGAACTGCTCTGATTTAGTTTACGTGCAACTATCGCAAAACATCTGGATATTGAAATTCTACGTATTTTATGTTTATTATTGTTATTGTAGACGATGATGTTCAGTTTGAATCTCACTGTTCAGATTTACGAGCGCTGTTCTGCGAGGAAAAAACTGGGAGATTCCTTTGCCACCATTTGGACAGGGTTGGTGAGTTAATTATCTCTATGATTATGATTTCGTGGGTAGTATCTTTGTGTCTCAAATGTATGGTTTCATTTTACCATTTGCAGCTCTCCGTTAAAAGCCAAGACCACGCTTTAAACCAAATATTAAAATTTCGATAATGACGAAAATGTTGTGTTAGGAACAAAGGTAGTATGGGCTACCTTTGTTCCAGATCGATTAGAATGGGATGACCATGTGGTACTTAAGTGGCTTAGCTCTTTCACCTCAATACCTGACTTTTGGGGTGTCGTTCTCCAAGGTGCTTAAGTGCTCAACAATGGTATTAGAGTCAGTTGTCAACGTTCTAGTGAGGCACCGGAAGAGGGTGGGATGTCGACTTTCCAGGGATGGAGTATTGCTAGGAACCAAGGTAGTATGGGCTACCTTTGTCCCACATCAATTAACAATCTATTACAATCCTAAAGTGACTATTTATAGCCTTACAAGGGAAGAAGACAATTAGCTAATTAATTCTAAAATACTAATTAAATAGTAATTAGTCTACGTTGGACATGATCTCTCATAGATTTGCTTTTAGTTTCATCCAAAAAGCCTTATACCATTGGAGATGGTTGTCATAACTTATGTACTCATGATCTTCCCTTTATCTAGTATGAGACTTTGGTCGCATTCCCAATAGTATGAGTGAAAGAAGAGGGAAGGGGGAGAACAAGCCTGAGAATTTAACCCAACCATGGAGGGTGAGAATAATGTTGATTGATAGGATTTTAGGTGTATTGTTGAGCATAAGTCTACATTCATTTGAAGCAAGTTATCAAGGAGTTACAGAGTTATCTGATAGCAGTTCTGCCCTCTGTTACTTTGAGAGAAATCTAGATACTAAGGTTATATTAGTAATCAAATAAGATAGGCAATTGTTTAGTAAATATGGGCATGAGCAAGGATTTGTAAAAAAAAAAAAAAAAAAATACCACAATGAACAATCCCATTCAAAATGATCCTCTCCCTACAAAACCTTAACTCCCTCTATTTATATCCAAGTCACCCATAACTAATTACCACTGTACTCTTACTAAGATACTACCAATATTCCCAATTTCTCTCCTATTAATACTCTCACAAAATACTTAAGAGAAGGAGGGTCCTCCAAATTGCTCGGAAGTTATCGTAGATTATCTACGTATTATCTTCAATAAATTTCAACTCTGGTTTTTATCATACGAGCCATCCTTTTGGCCATGCACCTTTATTTTGTGCAAACGTGTTATTAGTGCACAGTACAATTCATGGGAACTAGGATTTCGCCTCCACTATGGGACCTTAAGTCTCCCATGTATTGCAATGGATCAACTTTAATTTTATTTAATTAATTAAGTTAAACTATTACATAGGTTGAAAGTTGATTACATAAATGTAGTAGACCTAAGCCAACAATTTATTTATGAACTACCGCAAAGGGAGATTTGTCATTTGTGACCTCTCACCTCTTCTAAGTTCTCTACGAGGAATGTTTAAGAAGAAAATGCAGCAAAAGGATACCTCCTACTCACAAACGCTCCCATATAAGAGTCCTCCTTTACATAGTCTTCTTTCTAACCAACCAAAAGTAACGTGCCCCACACTAACACTACAAATTATCCTTCATGGACCTACTCCGTTAGATGCTTGCGCTTATAAATTTTTTTGTTGGTGCCTATCAAAATGGGAATTAAAATACGTTTAAATTTTTGCAAGCTACTAATATATTCCTTAACTATTCTTCCTTGATTTTTTTAAGCAACACCGCAGAATTATTAACTACCTCTCTCGAGTGCCAAGCTAGAACTAATTCCTAATTTTAATGAGATGTCATTAAGAAATAAAATTAGAGAATTGGTCAAATTCTTTTACATATTGATATTTTCATAATTTGGAAGGTCTATCAGAATCTACAAAATCCTATATCAAATCATTAAGTTGGGTTCTTGGTTTATTCCAATGTCAGCACAAAAAGAATCAAAGTTTTTATTTTTTTATTTTTTATTTTTTATTTTTATTTTTTAACAAGGAACTACTTTCTCATTGATATAATGAAAAGGAATAAATGTTCAAGAGATACAAACTCCCATGTGCAGTATATTGGGAATGCAATGAAGTTTCACGTTAGCTAGTTAAGGGAATGATCTAGGGTATATAAATGAGGACAACTATTTCTAATGGTATAAGGTCTTTTTGATGGTTCTAGAAACAAAATCATGAAGGTTTATGTTCAAATTGGACAATATCATACTATTATAGAGATATGTAGAGGTCTGTTGTCCCTAACAAAATGAGAAAAAAATGCAAACTCCCCAATTCACCATGTCTTTTGCTGTAATAATTGATGTTGTTCAGTAAAGCCTGGATTAATAACGGATCAAAGGCCATGGTTAGAACCCATAGGGAGTGATAAAGAATTAAAAACTCCCTCATCTTCCATCACATGGTATAATTTATATAAATCCAAGGAGTTTAAAAGGTCATTCAAAGAAAGAACTCCATTGAAGATATACAGAGGATCTAGAGCAGCAATGACTCCGTTTCCCTCTTTTCCTATTCTTAATTTCAATACTAGCAAGAAGAAATCCACACAAATTCCTATCGACTTCAATACGTGCTTCAGTACAATCTAACATATCAAATGTGAGAAGAAATACGCACCTGACCCCATAAGTAATGGCTGATAACTTCAAAGGTACTATGTTCCTAATAAGTTAAAAGTAAGTTCATGATTAAGATCCACCCACTTTACCCTTCCATGAAATCCGAATGAGTGTGTATTATCACTAGACCACTTCTCAGTAAGAAAATTTTCACTATAGAGCTTCAAACTGTTGGGGAGTTACCATCTTCAAGTTTGAGTCATTGTCTGCCATGTAAGGATTAAGATAAATATAGATCTTATAATGATCTTCCAAAAGCAAACCCTCAATCCTCAATCCATTCAAAATATCAGAAGAAGACAAAGCCTCAATCCTCTGGAAATAAGAAGATAAACCCGTGAGTGACATTCTGGTCACATCCCTGCAAAATCAAAATCTATATAGACGGCCAACTCAAGTTGTTTTGAAGTTAAAAGGATAATACAGAGAAGATTTATTTTTTGTTCATTTATAACTTACATGTGACTATGTTCACATCTCCAGCAACTTGTAATGATTCGGGCATTCATTCTTATATCTAAACTTGAACAAAGATTATTTCTAGATCATAAAGATGCAACTTATTGCTTTCCTTCTTACATTAAGAGTGTTATCTAGATCATAAATATGCGATTTAAATTTCAGTTTTGAAGACTTTTTGTAATTATTCTCTTCTAGCTTGTATCTCACTTAGTTGGAAACTCTTTCTTTAGGTGGGTTTTGTGGGTTTATTTTTTTTTGTTGCCCTTGTATTCTTTCATTTTTCTCGATGAAAGCAATTGTTTCTAGGAAAAAAAATATTAGACGTAGAAAAGCATTAGATGTAGATGTACCATCTATGTCCTGTGATTCCCTTCTGTTCTTTCTTGAACCATATTGTTAGTTATTCAATCATGAGCATAAATTGTGGCATTTCCTCTTCTTTTCTGTAGGTTTGAGACGGTATACCTTGATGAGGAGATCCGGGTTGTAAAAGATATCCGTGGTGATTATTTGATTGTCGAACGTGCTCCCCACACTTGGACAGAATGAAAGCTGAATAACAGGTTTTCATTACTGCTGTAGAAACATGATGTAATTGATTATAATAGTGTTAGTCATCTAAATTTTTCTTCCGAGTAGATTTATCCTTACTGGTGATTAAGACATGCAGCTCCTCTCATTGTGTAGGTATTCCATTAAGGGAAAGCCTGGGAGTGTTTACGAGTTGAATTTCAAAAGCTTATCTTTTTTCCCCATAAGACATAACTCCTAGAAACATGTTTTTGGATAATTTAAGTCTCATTTGATAATTATTTAGTTTTTAATTTTTGAAAAT

mRNA sequence

ATGGCCAAATCCCTCTCCCTTCCATCGCTCCCTTTCATTTCCCCTTCTTCCATTACAACCCATCTGTCTCAGCTCCCCAAAATCTCTTGCTCTTCCATATCCATTCAATCTCAATCAGCCAAAGACGAGCTTCTCACTCTCATATCTGACCAGGAAAGAGGTCTCAAGACCCAGAAGAACCCTCGGAAACTTGCTTCAATTGTGAAATCAATCGACGCCTTGGCTTCTCTGGGCCGTAATTCTGTCACTACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTTATTTGTTTGGTACTCAAGCTGGCGACGTTTTGCAGGTGATTGATGTTGAGAAAAAAAGTCTCAATAATGTCATCACTTTTCCTCCACATGGGGTTTTCTTCGTTCGATCCAACATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAAGTATGTTCTCTCTGCATACGATGATGTTCAGTTTGAATCTCACTGTTCAGATTTACGAGCGCTGTTCTGCGAGGAAAAAACTGGGAGATTCCTTTGCCACCATTTGGACAGGGTTGTAAAGCCTGGATTAATAACGGATCAAAGGCCATGGTTAGAACCCATAGGGAGTGATAAAGAATTAAAAACTCCCTCATCTTCCATCACATGGTTTGAGACGGTATACCTTGATGAGGAGATCCGGGTTGTAAAAGATATCCGTGGTGATTATTTGATTGTCGAACGTGCTCCCCACACTTGGACAGAATGAAAGCTGAATAACAGGTTTTCATTACTGCTGTAGAAACATGATGTAATTGATTATAATAGTGTTAGTCATCTAAATTTTTCTTCCGAGTAGATTTATCCTTACTGGTGATTAAGACATGCAGCTCCTCTCATTGTGTAGGTATTCCATTAAGGGAAAGCCTGGGAGTGTTTACGAGTTGAATTTCAAAAGCTTATCTTTTTTCCCCATAAGACATAACTCCTAGAAACATGTTTTTGGATAATTTAAGTCTCATTTGATAATTATTTAGTTTTTAATTTTTGAAAAT

Coding sequence (CDS)

ATGGCCAAATCCCTCTCCCTTCCATCGCTCCCTTTCATTTCCCCTTCTTCCATTACAACCCATCTGTCTCAGCTCCCCAAAATCTCTTGCTCTTCCATATCCATTCAATCTCAATCAGCCAAAGACGAGCTTCTCACTCTCATATCTGACCAGGAAAGAGGTCTCAAGACCCAGAAGAACCCTCGGAAACTTGCTTCAATTGTGAAATCAATCGACGCCTTGGCTTCTCTGGGCCGTAATTCTGTCACTACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTTATTTGTTTGGTACTCAAGCTGGCGACGTTTTGCAGGTGATTGATGTTGAGAAAAAAAGTCTCAATAATGTCATCACTTTTCCTCCACATGGGGTTTTCTTCGTTCGATCCAACATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAAGTATGTTCTCTCTGCATACGATGATGTTCAGTTTGAATCTCACTGTTCAGATTTACGAGCGCTGTTCTGCGAGGAAAAAACTGGGAGATTCCTTTGCCACCATTTGGACAGGGTTGTAAAGCCTGGATTAATAACGGATCAAAGGCCATGGTTAGAACCCATAGGGAGTGATAAAGAATTAAAAACTCCCTCATCTTCCATCACATGGTTTGAGACGGTATACCTTGATGAGGAGATCCGGGTTGTAAAAGATATCCGTGGTGATTATTTGATTGTCGAACGTGCTCCCCACACTTGGACAGAATGA

Protein sequence

MAKSLSLPSLPFISPSSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQKNPRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVLQVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRALFCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIRVVKDIRGDYLIVERAPHTWTE

Homology

[Close]

BLAST of ClCG06G003000 vs. NCBI nr
Match: XP_008458126.1 (PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-86
Identity = 185/260 (71.15%), Postives = 197/260 (75.77%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISPSSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQKN 60
           MAKSLSLPSLPFISPSSITTHLS LPKISCSSISIQSQSAK +LLTLISDQERGLKTQKN
Sbjct: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKHQLLTLISDQERGLKTQKN 60

Query: 61  PRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVL 120
           P+KLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDVL
Sbjct: 61  PQKLASIVKSIDDLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRAL 180
           QVIDVEKKSLNNVITFPP GVFFVRSNIEVASSQRVNF++  +             LR  
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAV------------LR-- 180

Query: 181 FCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIRV 240
                                            G + E+  P     WF+TVYLD+EIRV
Sbjct: 181 ---------------------------------GKNWEIPLPPFGQGWFDTVYLDDEIRV 213

Query: 241 VKDIRGDYLIVERAPHTWTE 261
           VKDIRGDYLIVERAP++WTE
Sbjct: 241 VKDIRGDYLIVERAPYSWTE 213

[Close]

BLAST of ClCG06G003000 vs. NCBI nr
Match: XP_004140490.1 (probable plastid-lipid-associated protein 11, chloroplastic [Cucumis sativus] >KGN46562.1 hypothetical protein Csa_005509 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 1.0e-83
Identity = 180/260 (69.23%), Postives = 195/260 (75.00%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISPSSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQKN 60
           MAKSLSLPSLPFI PSSIT+HLS LPKISCSSIS QSQSAK +LLTLISDQ+RGLKTQKN
Sbjct: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60

Query: 61  PRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVL 120
           P+KLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGT+AGDVL
Sbjct: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRAL 180
           QVIDVEKKSLNNVITFPP GVFFVRSNIEVASSQRVNF++  +             LR  
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAV------------LR-- 180

Query: 181 FCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIRV 240
                                            G + E+  P     WF+TVYLD+EIRV
Sbjct: 181 ---------------------------------GKNWEIPLPPFGQGWFDTVYLDDEIRV 213

Query: 241 VKDIRGDYLIVERAPHTWTE 261
           VKDIRGDYLIVERAP++WTE
Sbjct: 241 VKDIRGDYLIVERAPYSWTE 213

[Close]

BLAST of ClCG06G003000 vs. NCBI nr
Match: XP_038876017.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 6.8e-83
Identity = 178/260 (68.46%), Postives = 193/260 (74.23%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISPSSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQKN 60
           MAKSL LPSLPFISPSSI THLS LPKISCSS+SIQSQS K++LL LISDQERGLKTQK+
Sbjct: 1   MAKSLCLPSLPFISPSSIRTHLSHLPKISCSSVSIQSQSVKEKLLNLISDQERGLKTQKS 60

Query: 61  PRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVL 120
           P+KL SIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDVL
Sbjct: 61  PQKLDSIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRAL 180
           QVIDV+KKSLNNVITFPP GVFFVRSNIEVASSQRVNF++  +             LR  
Sbjct: 121 QVIDVQKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAV------------LR-- 180

Query: 181 FCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIRV 240
                                            G + E+  P     WF+TVYLD+EIRV
Sbjct: 181 ---------------------------------GKNWEIPLPPFGQGWFDTVYLDDEIRV 213

Query: 241 VKDIRGDYLIVERAPHTWTE 261
           VKDIRGDYLIVERAP+TW E
Sbjct: 241 VKDIRGDYLIVERAPYTWKE 213

[Close]

BLAST of ClCG06G003000 vs. NCBI nr
Match: XP_023547719.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.2 bits (796), Expect = 8.3e-81
Identity = 179/261 (68.58%), Postives = 193/261 (73.95%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISP-SSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQK 60
           MAKSLSLPS PF SP SSI THLSQLPKISCSSISIQSQS +D+LL LISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQLPKISCSSISIQSQSPRDQLLALISDQERGLKTQK 60

Query: 61  NPRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDV 120
           +P+KLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRA 180
           LQVIDV+KKSLNNVITFPP GVFFVRS+IEVASSQRVNF++  +             LR 
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAV------------LR- 180

Query: 181 LFCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIR 240
                                             G + E+  P     WFETVYLDE+IR
Sbjct: 181 ----------------------------------GKNWEIPLPPFGQGWFETVYLDEDIR 214

Query: 241 VVKDIRGDYLIVERAPHTWTE 261
           VVKDIR DYLIVERAP+TW E
Sbjct: 241 VVKDIRDDYLIVERAPYTWKE 214

[Close]

BLAST of ClCG06G003000 vs. NCBI nr
Match: XP_022959112.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 305.8 bits (782), Expect = 3.5e-79
Identity = 177/261 (67.82%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISP-SSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQK 60
           MAKSLSLPS PF SP SSI T LSQLPKISCSSISIQSQS KD+LL LISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTRLSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  NPRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDV 120
           +P+KLASIVKSIDALASL RNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRA 180
           LQVIDV+KKSLNNVITFPP GVFFVRS+IEVASSQRVNF++  +             LR 
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAV------------LR- 180

Query: 181 LFCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIR 240
                                             G + E+  P     WFETVYLD++IR
Sbjct: 181 ----------------------------------GKNWEIPLPPFGQGWFETVYLDDDIR 214

Query: 241 VVKDIRGDYLIVERAPHTWTE 261
           VVKDIR DYLIVERAP+TW E
Sbjct: 241 VVKDIRDDYLIVERAPYTWKE 214

[Close]

BLAST of ClCG06G003000 vs. ExPASy Swiss-Prot
Match: O81304 (Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP11 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-56
Identity = 123/234 (52.56%), Postives = 152/234 (64.96%), Query Frame = 0


Query: 27  KISCSSISIQSQSAKDELLTLISDQERGLKTQKNPRKLASIVKSIDALASLGRNSVTTDD 86
           + SCS  +  +Q AK +LL LIS+++RGL+TQK+P+K   IV +I+++  +GR+S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 87  SLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVLQVIDVEKKSLNNVITFPPHGVFFVRS 146
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPP GVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 147 NIEVASSQRVNFKYVLSAYDDVQFESHCSDLRALFCEEKTGRFLCHHLDRVVKPGLITDQ 206
           +I++AS QRVNF++            + + LR                            
Sbjct: 143 DIDIASPQRVNFRF------------NSAVLR---------------------------- 202

Query: 207 RPWLEPIGSDKELKTPSSSITWFETVYLDEEIRVVKDIRGDYLIVERAPHTWTE 261
                  G + EL  P     WFE VY+D EIRV KDIRGDYLIV+RAP+ WTE
Sbjct: 203 -------GKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDRAPYNWTE 209

[Close]

BLAST of ClCG06G003000 vs. ExPASy TrEMBL
Match: A0A1S3C7Q5 (probable plastid-lipid-associated protein 11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497655 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 185/260 (71.15%), Postives = 197/260 (75.77%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISPSSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQKN 60
           MAKSLSLPSLPFISPSSITTHLS LPKISCSSISIQSQSAK +LLTLISDQERGLKTQKN
Sbjct: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKHQLLTLISDQERGLKTQKN 60

Query: 61  PRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVL 120
           P+KLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDVL
Sbjct: 61  PQKLASIVKSIDDLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRAL 180
           QVIDVEKKSLNNVITFPP GVFFVRSNIEVASSQRVNF++  +             LR  
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAV------------LR-- 180

Query: 181 FCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIRV 240
                                            G + E+  P     WF+TVYLD+EIRV
Sbjct: 181 ---------------------------------GKNWEIPLPPFGQGWFDTVYLDDEIRV 213

Query: 241 VKDIRGDYLIVERAPHTWTE 261
           VKDIRGDYLIVERAP++WTE
Sbjct: 241 VKDIRGDYLIVERAPYSWTE 213

[Close]

BLAST of ClCG06G003000 vs. ExPASy TrEMBL
Match: A0A0A0KDV9 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108600 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 5.1e-84
Identity = 180/260 (69.23%), Postives = 195/260 (75.00%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISPSSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQKN 60
           MAKSLSLPSLPFI PSSIT+HLS LPKISCSSIS QSQSAK +LLTLISDQ+RGLKTQKN
Sbjct: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60

Query: 61  PRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVL 120
           P+KLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGT+AGDVL
Sbjct: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRAL 180
           QVIDVEKKSLNNVITFPP GVFFVRSNIEVASSQRVNF++  +             LR  
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAV------------LR-- 180

Query: 181 FCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIRV 240
                                            G + E+  P     WF+TVYLD+EIRV
Sbjct: 181 ---------------------------------GKNWEIPLPPFGQGWFDTVYLDDEIRV 213

Query: 241 VKDIRGDYLIVERAPHTWTE 261
           VKDIRGDYLIVERAP++WTE
Sbjct: 241 VKDIRGDYLIVERAPYSWTE 213

[Close]

BLAST of ClCG06G003000 vs. ExPASy TrEMBL
Match: A0A6J1H3N2 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460205 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.7e-79
Identity = 177/261 (67.82%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISP-SSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQK 60
           MAKSLSLPS PF SP SSI T LSQLPKISCSSISIQSQS KD+LL LISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTRLSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  NPRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDV 120
           +P+KLASIVKSIDALASL RNSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRA 180
           LQVIDV+KKSLNNVITFPP GVFFVRS+IEVASSQRVNF++  +             LR 
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAV------------LR- 180

Query: 181 LFCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIR 240
                                             G + E+  P     WFETVYLD++IR
Sbjct: 181 ----------------------------------GKNWEIPLPPFGQGWFETVYLDDDIR 214

Query: 241 VVKDIRGDYLIVERAPHTWTE 261
           VVKDIR DYLIVERAP+TW E
Sbjct: 241 VVKDIRDDYLIVERAPYTWKE 214

[Close]

BLAST of ClCG06G003000 vs. ExPASy TrEMBL
Match: A0A6J1KYC9 (probable plastid-lipid-associated protein 11, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499315 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 8.4e-79
Identity = 176/261 (67.43%), Postives = 190/261 (72.80%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISP-SSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQK 60
           MAKSLSLPS PF SP SSI THLSQ PKISCSSISIQSQS KD+LL LISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  NPRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDV 120
           +P+KLASIVKSIDALASL  NSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRA 180
           LQVIDV+KKSLNNVITFPP GVFFVRS+IEVASSQRVNF++  +             LR 
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAV------------LR- 180

Query: 181 LFCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIR 240
                                             G + E+  P     WFETVYLD++IR
Sbjct: 181 ----------------------------------GKNWEIPLPPFGQGWFETVYLDDDIR 214

Query: 241 VVKDIRGDYLIVERAPHTWTE 261
           VVKDIR DYLIVERAP+TW E
Sbjct: 241 VVKDIRDDYLIVERAPYTWKE 214

[Close]

BLAST of ClCG06G003000 vs. ExPASy TrEMBL
Match: A0A6J1KWG2 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499321 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.2e-78
Identity = 175/261 (67.05%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 1   MAKSLSLPSLPFISP-SSITTHLSQLPKISCSSISIQSQSAKDELLTLISDQERGLKTQK 60
           MAKSLSLPS PF SP SSI THLSQ PKI CSSISIQSQS KD+LL LISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKIPCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  NPRKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDV 120
           +P+KLASIVKSIDALASL  NSVTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVEKKSLNNVITFPPHGVFFVRSNIEVASSQRVNFKYVLSAYDDVQFESHCSDLRA 180
           LQVIDV+KKSLNNVITFPP GVFFVRS+IEVASSQRVNF++  +             LR 
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAV------------LR- 180

Query: 181 LFCEEKTGRFLCHHLDRVVKPGLITDQRPWLEPIGSDKELKTPSSSITWFETVYLDEEIR 240
                                             G + E+  P     WFETVYLD++IR
Sbjct: 181 ----------------------------------GKNWEIPLPPFGQGWFETVYLDDDIR 214

Query: 241 VVKDIRGDYLIVERAPHTWTE 261
           VVKDIR DYLIVERAP+TW E
Sbjct: 241 VVKDIRDDYLIVERAPYTWKE 214

[Close]

BLAST of ClCG06G003000 vs. TAIR 10
Match: AT4G00030.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 221.5 bits (563), Expect = 8.0e-58
Identity = 123/234 (52.56%), Postives = 152/234 (64.96%), Query Frame = 0


Query: 27  KISCSSISIQSQSAKDELLTLISDQERGLKTQKNPRKLASIVKSIDALASLGRNSVTTDD 86
           + SCS  +  +Q AK +LL LIS+++RGL+TQK+P+K   IV +I+++  +GR+S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 87  SLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVLQVIDVEKKSLNNVITFPPHGVFFVRS 146
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPP GVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 147 NIEVASSQRVNFKYVLSAYDDVQFESHCSDLRALFCEEKTGRFLCHHLDRVVKPGLITDQ 206
           +I++AS QRVNF++            + + LR                            
Sbjct: 143 DIDIASPQRVNFRF------------NSAVLR---------------------------- 202

Query: 207 RPWLEPIGSDKELKTPSSSITWFETVYLDEEIRVVKDIRGDYLIVERAPHTWTE 261
                  G + EL  P     WFE VY+D EIRV KDIRGDYLIV+RAP+ WTE
Sbjct: 203 -------GKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDRAPYNWTE 209

The following BLAST results are available for this feature:

BLAST of ClCG06G003000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458126.1	2.9e-86	71.15	PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cucumis melo...	[more]
XP_004140490.1	1.0e-83	69.23	probable plastid-lipid-associated protein 11, chloroplastic [Cucumis sativus] >K...	[more]
XP_038876017.1	6.8e-83	68.46	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Benincas...	[more]
XP_023547719.1	8.3e-81	68.58	probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbit...	[more]
XP_022959112.1	3.5e-79	67.82	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbit...	[more]

BLAST of ClCG06G003000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81304	1.1e-56	52.56	Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of ClCG06G003000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7Q5	1.4e-86	71.15	probable plastid-lipid-associated protein 11 isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KDV9	5.1e-84	69.23	PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1086...	[more]
A0A6J1H3N2	1.7e-79	67.82	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurb...	[more]
A0A6J1KYC9	8.4e-79	67.43	probable plastid-lipid-associated protein 11, chloroplastic isoform X2 OS=Cucurb...	[more]
A0A6J1KWG2	3.2e-78	67.05	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurb...	[more]

BLAST of ClCG06G003000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00030.1	8.0e-58	52.56	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 39..251 e-value: 2.1E-33 score: 116.0
IPR039633	Plastid-lipid-associated protein	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 15..256
None	No IPR available	PANTHER	PTHR31906:SF3	PLASTID-LIPID-ASSOCIATED PROTEIN 11, CHLOROPLASTIC-RELATED	coord: 15..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G003000.2	ClCG06G003000.2	mRNA