ClCG06G002960 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G002960
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Cyclin
Location	CG_Chr06: 3516492 .. 3517602 (-)
RNA-Seq Expression	ClCG06G002960
Synteny	ClCG06G002960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGTCCAATAATATTCCAATTTCCCCAAGAAGGCTTCGATCTGATTTGTACTCATATTCCTACAATGAGGATTCCAAAATCCCATTGGTGATTAATGTTGTTGCTTCCTTGATCCACAGAAGTATGGCTAGAAACCATCGGATTGCCAAAAACTACATGTCCATTTCTTCAAGGGATGTTGTTTTATTTGACTGCCGTGAGGCGCCCGACATGTCGATTCAAGCTTATTTGGAGAGGATATTTCGTTACACTAAAGCTGCTCCTTCTGTTTACGTTGTTGCTTATGTTTACATTGATCGGTTTTGCCAACATAATCCTGGATTTCGGATTACTCTTAGGAATGTTCATCGCCTTCTTATCACTACTGTCATGGTTGCTTCTAAATATGTCGAGGATATGTAAGTCTTTTTCTTTTTCAATCTTTCCATTCTATTTGTTTCTGAGTTTATCATTTTTGGGTTCCGTCTTTTTTTTTTCTCTTCTTTTTCTTCTTTTTCAATAGGAATATCCATTTACATTTAATGATTTTTCATACGATATTAGATAAATATGAGGTTTTATCTTAAAATCAATTCACATTAGAAATAATAGTTCATGTATCTTTTGAATATGAACATTCTTAATTAGTTTTTGGGTTTTGAATAATTAAAAACAATGTTTTTCTTTTTCAATTTAACGATGTAAAAAGTGGAAATTTTGAATCTCTGACCATTTTATGGTTACGTTGACAATGTATGTTAGTGAGTGTTGTTTTAAATTAAATTTTGAAAGTTTATAACTAAGAATGTTTTGAGTCATTGAGTGATGATTTAACAGATGTTTTATTTATTTTGGGAACAGGAATTACAGAAATTCGTACTATGCGAGAGTTGGAGGATTGTCAACAAAGGAGATAAATCAACTAGAACGAAATTTTTTGTTTCTAATAGGATTCAAATGTCATGTAAATTTAAGTGTTTTTGAGAGTTATTGTTGCCATTTAGAGAGAGAAGTTAGCATTGGTGGAGGATACCATATAGAGAGGACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATAATCAAATGGCTCGTATTATGTTGTAG

mRNA sequence

ATGGCGAAGTCCAATAATATTCCAATTTCCCCAAGAAGGCTTCGATCTGATTTGTACTCATATTCCTACAATGAGGATTCCAAAATCCCATTGGTGATTAATGTTGTTGCTTCCTTGATCCACAGAAGTATGGCTAGAAACCATCGGATTGCCAAAAACTACATGTCCATTTCTTCAAGGGATGTTGTTTTATTTGACTGCCGTGAGGCGCCCGACATGTCGATTCAAGCTTATTTGGAGAGGATATTTCGTTACACTAAAGCTGCTCCTTCTGTTTACGTTGTTGCTTATGTTTACATTGATCGGTTTTGCCAACATAATCCTGGATTTCGGATTACTCTTAGGAATGTTCATCGCCTTCTTATCACTACTGTCATGGTTGCTTCTAAATATGTCGAGGATATGAATTACAGAAATTCGTACTATGCGAGAGTTGGAGGATTGTCAACAAAGGAGATAAATCAACTAGAACGAAATTTTTTGTTTCTAATAGGATTCAAATGTCATGTAAATTTAAGTGTTTTTGAGAGTTATTGTTGCCATTTAGAGAGAGAAGTTAGCATTGGTGGAGGATACCATATAGAGAGGACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATAATCAAATGGCTCGTATTATGTTGTAG

Coding sequence (CDS)

ATGGCGAAGTCCAATAATATTCCAATTTCCCCAAGAAGGCTTCGATCTGATTTGTACTCATATTCCTACAATGAGGATTCCAAAATCCCATTGGTGATTAATGTTGTTGCTTCCTTGATCCACAGAAGTATGGCTAGAAACCATCGGATTGCCAAAAACTACATGTCCATTTCTTCAAGGGATGTTGTTTTATTTGACTGCCGTGAGGCGCCCGACATGTCGATTCAAGCTTATTTGGAGAGGATATTTCGTTACACTAAAGCTGCTCCTTCTGTTTACGTTGTTGCTTATGTTTACATTGATCGGTTTTGCCAACATAATCCTGGATTTCGGATTACTCTTAGGAATGTTCATCGCCTTCTTATCACTACTGTCATGGTTGCTTCTAAATATGTCGAGGATATGAATTACAGAAATTCGTACTATGCGAGAGTTGGAGGATTGTCAACAAAGGAGATAAATCAACTAGAACGAAATTTTTTGTTTCTAATAGGATTCAAATGTCATGTAAATTTAAGTGTTTTTGAGAGTTATTGTTGCCATTTAGAGAGAGAAGTTAGCATTGGTGGAGGATACCATATAGAGAGGACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATAATCAAATGGCTCGTATTATGTTGTAG

Protein sequence

MAKSNNIPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSISSRDVVLFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYNQMARIML

Homology

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BLAST of ClCG06G002960 vs. NCBI nr
Match: XP_038875511.1 (cyclin-U2-1 [Benincasa hispida])

HSP 1 Score: 394.4 bits (1012), Expect = 6.3e-106
Identity = 201/227 (88.55%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 1   MAKSNNIPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSI--- 60
           MAKS+NIPISPR+LRSDL  YSYNEDSKIPLVI+VVASLI RSMARNHRIAKNYMSI   
Sbjct: 1   MAKSSNIPISPRKLRSDL--YSYNEDSKIPLVISVVASLIERSMARNHRIAKNYMSICRD 60

Query: 61  --SSRDVVLFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLR 120
             SSR  V+FDC EAPDMSIQ YLERIFRYT+AAP VYVVAYVYIDRFCQ NP FRITLR
Sbjct: 61  HSSSRAGVVFDCHEAPDMSIQCYLERIFRYTRAAPCVYVVAYVYIDRFCQQNPSFRITLR 120

Query: 121 NVHRLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVF 180
           NVHRLLITTVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLFL+GFKCHVNLSVF
Sbjct: 121 NVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEVDFLFLMGFKCHVNLSVF 180

Query: 181 ESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYNQMARIML 223
           ESYCCHLEREVSIGGGYHIE+TLRCAEELKSKQNQQTTYNQMARIML
Sbjct: 181 ESYCCHLEREVSIGGGYHIEKTLRCAEELKSKQNQQTTYNQMARIML 225

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BLAST of ClCG06G002960 vs. NCBI nr
Match: XP_008459728.2 (PREDICTED: cyclin-U2-1 [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100
Identity = 197/228 (86.40%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MAKSNN---IPISPRRLRSDLYSYSYNED-SKIPLVINVVASLIHRSMARNHRIAKNYMS 60
           MA S++   IPISPR+LRSDLYSYSY+ED SKIPLVI+VVASLI R+MARNHRIA+NYM 
Sbjct: 1   MANSSSNIIIPISPRKLRSDLYSYSYSEDYSKIPLVISVVASLIERNMARNHRIARNYM- 60

Query: 61  ISSRDVVLFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLR 120
            SS+  V+FDCR EAPDMSIQ YLERIFRYTKAAPSVYVVAYVYIDRFCQ NP FRITLR
Sbjct: 61  -SSKGAVVFDCRDEAPDMSIQRYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLR 120

Query: 121 NVHRLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVF 180
           NVHRLLITTVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLFL+ FKCHVNLSVF
Sbjct: 121 NVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMKFKCHVNLSVF 180

Query: 181 ESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY-NQMARIML 223
           ESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY NQ+ARIML
Sbjct: 181 ESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

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BLAST of ClCG06G002960 vs. NCBI nr
Match: XP_004140492.1 (cyclin-U2-1 [Cucumis sativus] >KGN46558.1 hypothetical protein Csa_004772 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 1.5e-99
Identity = 195/226 (86.28%), Postives = 208/226 (92.04%), Query Frame = 0


Query: 2   AKSNN--IPISPRRLRSDLYSYSYNED-SKIPLVINVVASLIHRSMARNHRIAKNYMSIS 61
           A SNN  IPISPR+LRSDLYSYS++ED SKIPLVI+VVASLI R+MARNHRIA+NY   S
Sbjct: 3   ANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNY--TS 62

Query: 62  SRDVVLFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNV 121
           S+  V+FDCR EAPDMSIQ YLERIFRYTKAAP VYVVAYVYIDRFCQ NP FRITLRNV
Sbjct: 63  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 122

Query: 122 HRLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFES 181
           HRLLITTVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLFL+ FKCHVNLSVFES
Sbjct: 123 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 182

Query: 182 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY-NQMARIML 223
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY NQ+ARIML
Sbjct: 183 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of ClCG06G002960 vs. NCBI nr
Match: XP_023006659.1 (cyclin-U2-2 [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 2.4e-97
Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 7   IPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSI---SSRDVV 66
           +PISPR LRSD+YSYSY E S  PLVI VVASLI RSMARNHRIAKN MS+   S    +
Sbjct: 3   LPISPRSLRSDVYSYSYEEGSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRAL 62

Query: 67  LFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLIT 126
           +F+CREAPDMSIQ YLERIFRYTK  PSVYVVAYVYIDRFCQ NPGFRI+LRNVHRLLIT
Sbjct: 63  VFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRISLRNVHRLLIT 122

Query: 127 TVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLE 186
           TVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLF++GFKCHVNLSVFESYCCHLE
Sbjct: 123 TVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLE 182

Query: 187 REVSIGGGYHIERTLRCAEELKSKQNQQTTYNQMARIML 223
           REVSIGGGYHIERTLRCAEELKSKQ+QQ ++NQMARI L
Sbjct: 183 REVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 221

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BLAST of ClCG06G002960 vs. NCBI nr
Match: KAG7013796.1 (Cyclin-U2-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.2 bits (936), Expect = 4.1e-97
Identity = 182/219 (83.11%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 7   IPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSI---SSRDVV 66
           +PISPR LRSD+YSYSY E S  PLVI VVASLI RSMARNHRIAKN MS+   S    +
Sbjct: 3   LPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRAL 62

Query: 67  LFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLIT 126
           +F+CREAPDMSIQ YLERIFRYTK  PSVYVVAYVYIDRFCQ NPGFRI LRNVHRLLIT
Sbjct: 63  VFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLIT 122

Query: 127 TVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLE 186
           TVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLF++GFKCHVNLSVFESYCCHLE
Sbjct: 123 TVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLE 182

Query: 187 REVSIGGGYHIERTLRCAEELKSKQNQQTTYNQMARIML 223
           REVSIGGGYHIERTLRCAEELKSKQ+QQ ++NQMARI L
Sbjct: 183 REVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 221

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BLAST of ClCG06G002960 vs. ExPASy Swiss-Prot
Match: Q9M205 (Cyclin-U2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-2 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.4e-84
Identity = 154/230 (66.96%), Postives = 188/230 (81.74%), Query Frame = 0


Query: 1   MAKSNNIPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSISSR 60
           MA SN++ ISPR+LRSDLYSYSY  +SK PLVI+V++SLI R++ RN RI++  +  S  
Sbjct: 1   MAVSNSLTISPRKLRSDLYSYSYQNNSKTPLVISVLSSLIDRTLTRNERISRRALPSSGA 60

Query: 61  --DVVLFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVH 120
                +FDCRE PDM+IQ+YL RIFRYTKA PSVYVVAYVYIDRFCQ NPGFRI+L NVH
Sbjct: 61  GGKTQIFDCREIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVH 120

Query: 121 RLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESY 180
           RLLITT+M+ASKYVED+NYRNSY+A+VGGL T+++N+LE  FLFL+GFK HVN+SVFESY
Sbjct: 121 RLLITTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESY 180

Query: 181 CCHLEREVSIGGGYHIERTLRCAEELKSKQ------NQQTTYNQMARIML 223
           CCHLEREVS GGGY IE+ LRCAEE+KS+Q           ++Q+ARI+L
Sbjct: 181 CCHLEREVSFGGGYQIEKALRCAEEIKSRQMIIQDPKHHHHHHQLARILL 230

[Close]

BLAST of ClCG06G002960 vs. ExPASy Swiss-Prot
Match: Q9SHD3 (Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-83
Identity = 154/223 (69.06%), Postives = 188/223 (84.30%), Query Frame = 0


Query: 5   NNIPISPRRLRSDLYSYSYNEDSK-IPLVINVVASLIHRSMARNHRIAKNYMSISSRDVV 64
           +++ ISPR+LRSDLYSYSY +DS  +PLVI+V++SLI R++ARN RI+++Y       V 
Sbjct: 2   DSLAISPRKLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRV- 61

Query: 65  LFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLIT 124
            FDCRE PDM+IQ+YLERIFRYTKA PSVYVVAYVYIDRFCQ+N GFRI+L NVHRLLIT
Sbjct: 62  -FDCREIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLIT 121

Query: 125 TVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLE 184
           T+M+ASKYVEDMNY+NSY+A+VGGL T+++N LE  FLFL+GFK HVN+SVFESYCCHLE
Sbjct: 122 TIMIASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLE 181

Query: 185 REVSIGGGYHIERTLRCAEELKSKQNQQTT----YNQMARIML 223
           REVSIGGGY IE+ LRCAEE+KS+Q  Q      ++Q +RIML
Sbjct: 182 REVSIGGGYQIEKALRCAEEIKSRQIVQDPKHHHHHQFSRIML 222

[Close]

BLAST of ClCG06G002960 vs. ExPASy Swiss-Prot
Match: Q7FAT5 (Cyclin-P2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP2-1 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-43
Identity = 96/206 (46.60%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 14  LRSDLYSYSYNEDS----KIPLVINVVASLIHRSMARNHR-IAKNYMSISSRDVVLFDCR 73
           L SD+Y+    +D       P+V++V+ASL+ R +ARN R  A      ++R    FD  
Sbjct: 6   LASDVYALPCGDDGTTALSTPVVVSVLASLLERHIARNERDQAAAADGEAARRARAFDSG 65

Query: 74  EAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLITTVMVA 133
              DMS+ A+LER  RY   +P VYVVAY Y+DR  +   G R+   N  RLL T ++VA
Sbjct: 66  TVLDMSLHAFLERFSRYANVSPQVYVVAYAYLDRL-RRGDGVRVVSANAQRLLTTAILVA 125

Query: 134 SKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLEREVSI 193
           SK+VED NY+NSY+A VGGL+  E++ LE +FLFL+ F+ +V++SVF+SYC HLEREVS 
Sbjct: 126 SKFVEDRNYKNSYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLEREVSY 185

Query: 194 GGGYHIERTLR----CAEELKSKQNQ 211
           GGGY +ER L+    C+ E +++Q Q
Sbjct: 186 GGGYQVERCLKKALVCSGEAQAQQRQ 210

[Close]

BLAST of ClCG06G002960 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-35
Identity = 69/163 (42.33%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 26  DSKIPLVINVVASLIHRSMARNHRIAKNYMSISSRDVVLFDCREAPDMSIQAYLERIFRY 85
           ++  P V+ +++ ++ + +ARN  +AK       + +  F    AP +SI  YLERI++Y
Sbjct: 21  EAATPRVLTIISHVMEKLVARNEWLAKQTKGF-GKSLEAFHGVRAPSISIAKYLERIYKY 80

Query: 86  TKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARV 145
           TK +P+ +VV YVYIDR    +PG  +   NVHRLL+T VM+A+K ++D++Y N +YARV
Sbjct: 81  TKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARV 140

Query: 146 GGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLEREVSI 189
           GG+S  ++N++E   LFL+ F+  V+  VFESYC HLE+E+ +
Sbjct: 141 GGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

[Close]

BLAST of ClCG06G002960 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.8e-32
Identity = 71/157 (45.22%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 32  VINVVASLIHRSMARNHRIAKNYMSISSRDVVLFDCREAPDMSIQAYLERIFRYTKAAPS 91
           +I  ++SL+ R +A ++ + +   + S R V +F     P ++IQ+YLERIF+Y   +PS
Sbjct: 13  LIAFLSSLLER-VAESNDLTRRVATQSQR-VSVFHGLSRPTITIQSYLERIFKYANCSPS 72

Query: 92  VYVVAYVYIDRFCQHNPGFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLSTK 151
            +VVAYVY+DRF    P   I   NVHRLLIT+VMVA+K+++D+ Y N+YYA+VGG+STK
Sbjct: 73  CFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTK 132

Query: 152 EINQLERNFLFLIGFKCHVNLSVFESYCCHLEREVSI 189
           E+N LE +FLF +GF+ +V  + F +Y  +L++E+++
Sbjct: 133 EMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

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BLAST of ClCG06G002960 vs. ExPASy TrEMBL
Match: A0A1S3CAV0 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103498771 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.6e-101
Identity = 197/228 (86.40%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MAKSNN---IPISPRRLRSDLYSYSYNED-SKIPLVINVVASLIHRSMARNHRIAKNYMS 60
           MA S++   IPISPR+LRSDLYSYSY+ED SKIPLVI+VVASLI R+MARNHRIA+NYM 
Sbjct: 1   MANSSSNIIIPISPRKLRSDLYSYSYSEDYSKIPLVISVVASLIERNMARNHRIARNYM- 60

Query: 61  ISSRDVVLFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLR 120
            SS+  V+FDCR EAPDMSIQ YLERIFRYTKAAPSVYVVAYVYIDRFCQ NP FRITLR
Sbjct: 61  -SSKGAVVFDCRDEAPDMSIQRYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLR 120

Query: 121 NVHRLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVF 180
           NVHRLLITTVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLFL+ FKCHVNLSVF
Sbjct: 121 NVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMKFKCHVNLSVF 180

Query: 181 ESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY-NQMARIML 223
           ESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY NQ+ARIML
Sbjct: 181 ESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of ClCG06G002960 vs. ExPASy TrEMBL
Match: A0A0A0KAQ9 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G108560 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.3e-100
Identity = 195/226 (86.28%), Postives = 208/226 (92.04%), Query Frame = 0


Query: 2   AKSNN--IPISPRRLRSDLYSYSYNED-SKIPLVINVVASLIHRSMARNHRIAKNYMSIS 61
           A SNN  IPISPR+LRSDLYSYS++ED SKIPLVI+VVASLI R+MARNHRIA+NY   S
Sbjct: 3   ANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNY--TS 62

Query: 62  SRDVVLFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNV 121
           S+  V+FDCR EAPDMSIQ YLERIFRYTKAAP VYVVAYVYIDRFCQ NP FRITLRNV
Sbjct: 63  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 122

Query: 122 HRLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFES 181
           HRLLITTVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLFL+ FKCHVNLSVFES
Sbjct: 123 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 182

Query: 182 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY-NQMARIML 223
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTY NQ+ARIML
Sbjct: 183 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of ClCG06G002960 vs. ExPASy TrEMBL
Match: A0A6J1L2S6 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499317 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 7   IPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSI---SSRDVV 66
           +PISPR LRSD+YSYSY E S  PLVI VVASLI RSMARNHRIAKN MS+   S    +
Sbjct: 3   LPISPRSLRSDVYSYSYEEGSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRAL 62

Query: 67  LFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLIT 126
           +F+CREAPDMSIQ YLERIFRYTK  PSVYVVAYVYIDRFCQ NPGFRI+LRNVHRLLIT
Sbjct: 63  VFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRISLRNVHRLLIT 122

Query: 127 TVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLE 186
           TVMVASKYVEDMNYRNSYYARVGGL+TKE+NQLE +FLF++GFKCHVNLSVFESYCCHLE
Sbjct: 123 TVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLE 182

Query: 187 REVSIGGGYHIERTLRCAEELKSKQNQQTTYNQMARIML 223
           REVSIGGGYHIERTLRCAEELKSKQ+QQ ++NQMARI L
Sbjct: 183 REVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 221

[Close]

BLAST of ClCG06G002960 vs. ExPASy TrEMBL
Match: A0A6J1DZT6 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111025028 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.3e-92
Identity = 174/220 (79.09%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 9   ISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSISS-----RDVV 68
           ISPR+LRSDLYSYSY +DS+ PLVI V++SLI RSMARNHRI+KNY + S         +
Sbjct: 19  ISPRKLRSDLYSYSYGQDSETPLVITVLSSLIERSMARNHRISKNYCTKSKWASRRHSAL 78

Query: 69  LFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLIT 128
           +FD  EAPDMSIQ+YLERIF YT+A PSVYVVAYVYIDRFCQ NP FRITLRNVHRLLIT
Sbjct: 79  VFDSGEAPDMSIQSYLERIFCYTRAGPSVYVVAYVYIDRFCQLNPEFRITLRNVHRLLIT 138

Query: 129 TVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLE 188
           T+MVASKYVEDMNYRNSY+ARVGGL+ KE+NQLE +FLF++GFKCHVN+SVFESYCCHLE
Sbjct: 139 TIMVASKYVEDMNYRNSYFARVGGLTRKEMNQLELDFLFMMGFKCHVNVSVFESYCCHLE 198

Query: 189 REVSIGGGYHIERTLRCAEEL-KSKQNQQTTYNQMARIML 223
           REVSIGGGYHIERTLRCAEEL  SKQNQQTT+NQM RIML
Sbjct: 199 REVSIGGGYHIERTLRCAEELNNSKQNQQTTFNQMPRIML 238

[Close]

BLAST of ClCG06G002960 vs. ExPASy TrEMBL
Match: A0A6J1A0Y6 (Cyclin OS=Herrania umbratica OX=108875 GN=LOC110414053 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.2e-91
Identity = 169/224 (75.45%), Postives = 192/224 (85.71%), Query Frame = 0


Query: 1   MAKSNNIPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSISSR 60
           MA SN++ ISPR+LRSDLY YSY  D+  PLVI+V+ASLI R+M RN RIAKN     ++
Sbjct: 1   MAASNSLTISPRKLRSDLYCYSYQNDANTPLVISVLASLIERTMTRNERIAKNCKWSLTK 60

Query: 61  DV--VLFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVH 120
           D    +FDC E PDM+IQ+YLERIFRYTKA PSVYVVAYVYIDRFCQ NPGFRI  RNVH
Sbjct: 61  DYRSRVFDCHETPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQANPGFRINARNVH 120

Query: 121 RLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESY 180
           RLLITT+MVASKYVEDMNYRNSY+ARVGGL+T E+N LE  FLFL+GFK HVN+SVFESY
Sbjct: 121 RLLITTIMVASKYVEDMNYRNSYFARVGGLTTNELNNLELEFLFLMGFKLHVNVSVFESY 180

Query: 181 CCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYNQMARIML 223
           CCHLEREVSIGGGYHIERTLRCAEE+KS+QN++  YNQ+ARIML
Sbjct: 181 CCHLEREVSIGGGYHIERTLRCAEEIKSRQNEERRYNQIARIML 224

[Close]

BLAST of ClCG06G002960 vs. TAIR 10
Match: AT3G60550.1 (cyclin p3;2 )

HSP 1 Score: 312.0 bits (798), Expect = 3.9e-85
Identity = 154/230 (66.96%), Postives = 188/230 (81.74%), Query Frame = 0


Query: 1   MAKSNNIPISPRRLRSDLYSYSYNEDSKIPLVINVVASLIHRSMARNHRIAKNYMSISSR 60
           MA SN++ ISPR+LRSDLYSYSY  +SK PLVI+V++SLI R++ RN RI++  +  S  
Sbjct: 1   MAVSNSLTISPRKLRSDLYSYSYQNNSKTPLVISVLSSLIDRTLTRNERISRRALPSSGA 60

Query: 61  --DVVLFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVH 120
                +FDCRE PDM+IQ+YL RIFRYTKA PSVYVVAYVYIDRFCQ NPGFRI+L NVH
Sbjct: 61  GGKTQIFDCREIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVH 120

Query: 121 RLLITTVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESY 180
           RLLITT+M+ASKYVED+NYRNSY+A+VGGL T+++N+LE  FLFL+GFK HVN+SVFESY
Sbjct: 121 RLLITTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESY 180

Query: 181 CCHLEREVSIGGGYHIERTLRCAEELKSKQ------NQQTTYNQMARIML 223
           CCHLEREVS GGGY IE+ LRCAEE+KS+Q           ++Q+ARI+L
Sbjct: 181 CCHLEREVSFGGGYQIEKALRCAEEIKSRQMIIQDPKHHHHHHQLARILL 230

[Close]

BLAST of ClCG06G002960 vs. TAIR 10
Match: AT2G45080.1 (cyclin p3;1 )

HSP 1 Score: 310.8 bits (795), Expect = 8.6e-85
Identity = 154/223 (69.06%), Postives = 188/223 (84.30%), Query Frame = 0


Query: 5   NNIPISPRRLRSDLYSYSYNEDSK-IPLVINVVASLIHRSMARNHRIAKNYMSISSRDVV 64
           +++ ISPR+LRSDLYSYSY +DS  +PLVI+V++SLI R++ARN RI+++Y       V 
Sbjct: 2   DSLAISPRKLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRV- 61

Query: 65  LFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLIT 124
            FDCRE PDM+IQ+YLERIFRYTKA PSVYVVAYVYIDRFCQ+N GFRI+L NVHRLLIT
Sbjct: 62  -FDCREIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLIT 121

Query: 125 TVMVASKYVEDMNYRNSYYARVGGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLE 184
           T+M+ASKYVEDMNY+NSY+A+VGGL T+++N LE  FLFL+GFK HVN+SVFESYCCHLE
Sbjct: 122 TIMIASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLE 181

Query: 185 REVSIGGGYHIERTLRCAEELKSKQNQQTT----YNQMARIML 223
           REVSIGGGY IE+ LRCAEE+KS+Q  Q      ++Q +RIML
Sbjct: 182 REVSIGGGYQIEKALRCAEEIKSRQIVQDPKHHHHHQFSRIML 222

[Close]

BLAST of ClCG06G002960 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 149.1 bits (375), Expect = 4.3e-36
Identity = 69/163 (42.33%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 26  DSKIPLVINVVASLIHRSMARNHRIAKNYMSISSRDVVLFDCREAPDMSIQAYLERIFRY 85
           ++  P V+ +++ ++ + +ARN  +AK       + +  F    AP +SI  YLERI++Y
Sbjct: 21  EAATPRVLTIISHVMEKLVARNEWLAKQTKGF-GKSLEAFHGVRAPSISIAKYLERIYKY 80

Query: 86  TKAAPSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARV 145
           TK +P+ +VV YVYIDR    +PG  +   NVHRLL+T VM+A+K ++D++Y N +YARV
Sbjct: 81  TKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARV 140

Query: 146 GGLSTKEINQLERNFLFLIGFKCHVNLSVFESYCCHLEREVSI 189
           GG+S  ++N++E   LFL+ F+  V+  VFESYC HLE+E+ +
Sbjct: 141 GGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

[Close]

BLAST of ClCG06G002960 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-33
Identity = 71/157 (45.22%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 32  VINVVASLIHRSMARNHRIAKNYMSISSRDVVLFDCREAPDMSIQAYLERIFRYTKAAPS 91
           +I  ++SL+ R +A ++ + +   + S R V +F     P ++IQ+YLERIF+Y   +PS
Sbjct: 13  LIAFLSSLLER-VAESNDLTRRVATQSQR-VSVFHGLSRPTITIQSYLERIFKYANCSPS 72

Query: 92  VYVVAYVYIDRFCQHNPGFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLSTK 151
            +VVAYVY+DRF    P   I   NVHRLLIT+VMVA+K+++D+ Y N+YYA+VGG+STK
Sbjct: 73  CFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTK 132

Query: 152 EINQLERNFLFLIGFKCHVNLSVFESYCCHLEREVSI 189
           E+N LE +FLF +GF+ +V  + F +Y  +L++E+++
Sbjct: 133 EMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]

BLAST of ClCG06G002960 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-33
Identity = 67/160 (41.88%), Postives = 106/160 (66.25%), Query Frame = 0


Query: 29  IPLVINVVASLIHRSMARNHRIAKNYMSISSRDVVLFDCREAPDMSIQAYLERIFRYTKA 88
           +P V+  ++ L+ R    N  +++     S   V        P +SI++YLERIF Y   
Sbjct: 22  MPSVLTAMSYLLQRVSETNDNLSQKQKPSSFTGVT------KPSISIRSYLERIFEYANC 81

Query: 89  APSVYVVAYVYIDRFCQHNPGFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGL 148
           + S Y+VAY+Y+DRF +  P   I   NVHRL+IT+V+V++K+++D++Y N YYA+VGG+
Sbjct: 82  SYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGI 141

Query: 149 STKEINQLERNFLFLIGFKCHVNLSVFESYCCHLEREVSI 189
           S +E+N LE +FLF IGF+ +V +S F +YCC L+RE+++
Sbjct: 142 SREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAM 175

The following BLAST results are available for this feature:

BLAST of ClCG06G002960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875511.1	6.3e-106	88.55	cyclin-U2-1 [Benincasa hispida]	[more]
XP_008459728.2	1.4e-100	86.40	PREDICTED: cyclin-U2-1 [Cucumis melo]	[more]
XP_004140492.1	1.5e-99	86.28	cyclin-U2-1 [Cucumis sativus] >KGN46558.1 hypothetical protein Csa_004772 [Cucum...	[more]
XP_023006659.1	2.4e-97	83.11	cyclin-U2-2 [Cucurbita maxima]	[more]
KAG7013796.1	4.1e-97	83.11	Cyclin-U2-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of ClCG06G002960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M205	5.4e-84	66.96	Cyclin-U2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-2 PE=1 SV=1	[more]
Q9SHD3	1.2e-83	69.06	Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1	[more]
Q7FAT5	3.6e-43	46.60	Cyclin-P2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP2-1 PE=2 SV=1	[more]
Q9LJ45	6.1e-35	42.33	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]
O80513	2.8e-32	45.22	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]

BLAST of ClCG06G002960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAV0	6.6e-101	86.40	Cyclin OS=Cucumis melo OX=3656 GN=LOC103498771 PE=3 SV=1	[more]
A0A0A0KAQ9	7.3e-100	86.28	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G108560 PE=3 SV=1	[more]
A0A6J1L2S6	1.2e-97	83.11	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499317 PE=3 SV=1	[more]
A0A6J1DZT6	7.3e-92	79.09	Cyclin OS=Momordica charantia OX=3673 GN=LOC111025028 PE=3 SV=1	[more]
A0A6J1A0Y6	6.2e-91	75.45	Cyclin OS=Herrania umbratica OX=108875 GN=LOC110414053 PE=3 SV=1	[more]

BLAST of ClCG06G002960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60550.1	3.9e-85	66.96	cyclin p3;2	[more]
AT2G45080.1	8.6e-85	69.06	cyclin p3;1	[more]
AT3G21870.1	4.3e-36	42.33	cyclin p2;1	[more]
AT2G44740.1	2.0e-33	45.22	cyclin p4;1	[more]
AT5G61650.1	2.0e-33	41.88	CYCLIN P4;2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 8..221 e-value: 1.6E-67 score: 225.3
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 62..167 e-value: 1.8E-31 score: 109.7
None	No IPR available	GENE3D	1.10.472.10		coord: 21..221 e-value: 1.0E-51 score: 177.5
None	No IPR available	PANTHER	PTHR15615:SF15	CYCLIN-U2-1	coord: 8..221
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 8..221
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 77..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G002960.1	ClCG06G002960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0019901	protein kinase binding