ClCG06G002160 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G002160
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Location	CG_Chr06: 2378769 .. 2381002 (+)
RNA-Seq Expression	ClCG06G002160
Synteny	ClCG06G002160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGTTCATATAGAATCGAACTTTTGATTGATCCGGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAAGAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGTAAATTAAACGGTATTCCCGTAGCAATTGGAGACATTGACATTTTATTGATATTTTTATCAACAAATTCATAAAATATCTCGATATTTCAATTGACATCAACATTTTAAACTTTGCATTCATCTGCATTAGTTTTCTGAAAAACGTGTTAGACTATGAATGCAATATTGTTAAAGAGACGGCATGTTTTCTCTTAAATAGTTTTTAATTACCATTTTTTCTAATTTTTTTTTAAATCTTTAATATTGTCCTAATAACCCCATAAATTTATGATCTGGATTCACGGGAGATGGGGTCTGCAGGAACCCGCCCTGAATAGGACGAGGATTCCCTGTTTAGGCAAGGAACAAAGGAGGGAGTATGGAGGAAAATTTTCCCATGGGGTAAATGGGGATGGGGACAGGGAATGCACTCTCGTCTTCATCCCGACTCCGTTAGCCTCTTTTATTTAATTATCATTATTATAATAATTTAACGTTGTGTTATTATTAATAAATATTTATATCTAAATTTTAAGTTTTATTGTTTAATGGTTAAGATATTGAATATATTTGAATTTAACCTTTAGATTTAGATTATATTTATGAATAATTTTTTGTAATTATTTCTTTCTTCTAATTTTTTTTTTTGAGTAATTTCTCCATAGATTTAAATTATTCATGTGGAACTAATCATATTAAAAAACTTAGTAAGAAATTTAACTATTCAATTAATTTAAGTCAATCGATTTTTTTAACAAAAAGAATAAATAAAAAAAACAAAAAAAAAAATCAAATGGTGAAAAATTCTCCAAAAAAACTGGATCTCTACAAATTTACCATGGGGAATCCGTGCCCCAATCTTCGTAGAAAATTTTGTGAAGATGGAAAATAAAGTGGAAAGGCAGGACGAAGAGTAGAAAAGACATCTTTAATTGTAAAAGTTGGTGGAAACTAATTTCATGCCCAATCAATCATTCCCTCATTTTCTCCACCCAAAAGAAAACCCTCATGTAAGCCTAATAAGCCTAATTGTGAAGCGTTACATTCAACCACACATAGAGTTGATAAATCGATCCACCCAGAACAACATAAACAATAACAATAACAATAATAATAAGAAAAAAGAAAATTAAATGAGACGTGAATTTATCCATTATTGATTATTATAATTGGGGGTCTTAATTAATTATTTTCCCCCCCACTTTGAATTTGTGCAAGATTTAGATAAGGTTCCATATGATTCGGACATTTTCCAGAGTCCGCATGACTTGCTCTCCGGCGCGTGAACACCACGCGCTCCTTCCCCTTCCACAGTTAGCTTCCTCGATTATCGGTAAGGATAATTCTGCTTTCTCCTTTATCTTGCTTTCTCTGCATCCAAACAGACTTAATCCGAGAAAATTCCATTCAACTGGAACTCGGATTCCTTTCGCCAACACCATTTCACACCCCCACTTCTCTTTCTAATTCCTTCTTCTCGGGAATCTAACTTTCTTTTTCAACACTCTTCAGACTTATCCACTTCTTACCCTTTTTAGATTTTTCCCCAATTCATCCATTCCCCTCGCTGGAGGTCTTTTCATTTTGATTTTGCTTTCTTCGTTGTGGGTTTTTTGGTTGTGATGAGTAGGCCTCGAGAACATCCCCAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTCGTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCCTTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGATGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACCGCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCCTGTCTCCTTGTTTTTATTGGATTTGATTTTTTGCTTCATTTCCTTATCTGA

mRNA sequence

ATGAGTAGTTCATATAGAATCGAACTTTTGATTGATCCGGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAAGAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGCAAGGAACAAAGGAGGGAGTATGGAGGAAAATTTTCCCATGGGATTTTTCCCCAATTCATCCATTCCCCTCGCTGGAGGTCTTTTCATTTTGATTTTGCTTTCTTCGTTGTGGGTTTTTTGGTTGTGATGAGTAGGCCTCGAGAACATCCCCAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTCGTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCCTTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGATGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACCGCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCCTGTCTCCTTGTTTTTATTGGATTTGATTTTTTGCTTCATTTCCTTATCTGA

Coding sequence (CDS)

ATGAGTAGTTCATATAGAATCGAACTTTTGATTGATCCGGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAAGAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGCAAGGAACAAAGGAGGGAGTATGGAGGAAAATTTTCCCATGGGATTTTTCCCCAATTCATCCATTCCCCTCGCTGGAGGTCTTTTCATTTTGATTTTGCTTTCTTCGTTGTGGGTTTTTTGGTTGTGATGAGTAGGCCTCGAGAACATCCCCAATCTGGGGTTTTTTATGAGATTTCGTCTCTGCTTTTGAAAATTCTACGATCGCCACCTCCTCCGGTGCCTTTTTCCGATCATGTTCTGGAATTATCTTCAGCTATTTCGTCTTCGTCGAGGATTTTGCCTTCCTCTCAGATTACCCCAGCTGGATTTGCGGCGTTGCTTTTGGGGATTTCGTTGGCTTTAATGCTTTGTGGATCGGTTACTTTCTTCCTTGGTTTCATGTTGATGCCTTGGATTCTCGTTTTGGTGATGATTTGTTATGTGGTTGGGATCGTCTCTACCCTCTCTATGTTGGGACGCTCTTTACTTTGTTGTTTCACCGCTCCAACGCCTCGGAAAGATTTTCATGGCGAGTTTCTTTTCTCGTCCTGTCTCCTTGTTTTTATTGGATTTGATTTTTTGCTTCATTTCCTTATCTGA

Protein sequence

MSSSYRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTGKEQRREYGGKFSHGIFPQFIHSPRWRSFHFDFAFFVVGFLVVMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTAPTPRKDFHGEFLFSSCLLVFIGFDFLLHFLI

Homology

[Close]

BLAST of ClCG06G002160 vs. NCBI nr
Match: KAG7014655.1 (hypothetical protein SDJN02_24834, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.2 bits (583), Expect = 4.0e-56
Identity = 120/144 (83.33%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 103 MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 162
           MSRP++ PQSG  +EISSLLLKILRSPPPPVPF+DHVLELSSAISSSS   PSSQ++P G
Sbjct: 143 MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSPTG 202

Query: 163 FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTAP 222
           FAALLLGISLALMLCGSVTFFLGFMLMPWILV VMI Y+VGIVS++SMLGRS+LCCFTAP
Sbjct: 203 FAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAP 262

Query: 223 TPRKDFHGEFLFSSCLLVFIGFDF 247
           TPRKDFHGEFLF  C LVFI F F
Sbjct: 263 TPRKDFHGEFLFCLCFLVFIRFGF 286

[Close]

BLAST of ClCG06G002160 vs. NCBI nr
Match: XP_038875874.1 (uncharacterized protein LOC120068233 [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 8.9e-56
Identity = 119/128 (92.97%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 103 MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPAG 162
           M+RP++HPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSS ILPSSQ+TPAG
Sbjct: 1   MNRPQQHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSGILPSSQMTPAG 60

Query: 163 FAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTAP 222
           FAALLLGISLALMLCGSVTFFLGFMLMPWILV VMI YV GIVS+LSMLGRSLLCCFTAP
Sbjct: 61  FAALLLGISLALMLCGSVTFFLGFMLMPWILVSVMIFYVAGIVSSLSMLGRSLLCCFTAP 120

Query: 223 TPRKDFHG 231
           TPRKDFHG
Sbjct: 121 TPRKDFHG 128

[Close]

BLAST of ClCG06G002160 vs. NCBI nr
Match: XP_004151234.1 (uncharacterized protein LOC101208751 [Cucumis sativus] >KGN46462.1 hypothetical protein Csa_004800 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 4.1e-53
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 103 MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 162
           M   R+ P+SGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI SSSSRILPSSQ+TPA
Sbjct: 1   MIMARQDPRSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMTPA 60

Query: 163 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 222
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YVVGIVS+LSMLGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCFTA 120

Query: 223 PTPRKDFHG 231
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of ClCG06G002160 vs. NCBI nr
Match: XP_008459845.1 (PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-51
Identity = 114/129 (88.37%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 103 MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 162
           M+  ++ P+SGVF+EISSLLLKILRSPPPPVPFSDHVLELSS I SSSSRILPSSQ+TPA
Sbjct: 1   MNMAQQDPRSGVFHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMTPA 60

Query: 163 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 222
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YVVGIVS+LS+LGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCFTA 120

Query: 223 PTPRKDFHG 231
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of ClCG06G002160 vs. NCBI nr
Match: XP_022155438.1 (uncharacterized protein LOC111022584 isoform X1 [Momordica charantia])

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-51
Identity = 113/136 (83.09%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 102 VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPA 161
           +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPA
Sbjct: 1   MMRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPA 60

Query: 162 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 221
           G A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YVVGIVS+LSMLGRS+LCCF+A
Sbjct: 61  GLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSA 120

Query: 222 PTPRKDFHGEFLFSSC 238
           PTPRKDF+ +F F  C
Sbjct: 121 PTPRKDFNAQF-FHCC 135

[Close]

BLAST of ClCG06G002160 vs. ExPASy Swiss-Prot
Match: Q09X08 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Morus indica OX=248361 GN=accD PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1   MSSSYRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTG 60
           MSSS RIELLIDPGTWDPMDEDMVSLDPIEF+SEEEPYKDRIDSYQRKTGLTEA+QTGTG
Sbjct: 263 MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFNSEEEPYKDRIDSYQRKTGLTEAVQTGTG 322

Query: 61  K 62
           K
Sbjct: 323 K 323

[Close]

BLAST of ClCG06G002160 vs. ExPASy Swiss-Prot
Match: Q3C1J3 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=accD PE=3 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1   MSSSYRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTG 60
           MSSS RIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G
Sbjct: 258 MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIG 317

Query: 61  K 62
           +
Sbjct: 318 Q 318

[Close]

BLAST of ClCG06G002160 vs. ExPASy Swiss-Prot
Match: Q33C25 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN=accD PE=3 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1   MSSSYRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTG 60
           MSSS RIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G
Sbjct: 258 MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIG 317

Query: 61  K 62
           +
Sbjct: 318 Q 318

[Close]

BLAST of ClCG06G002160 vs. ExPASy Swiss-Prot
Match: Q2MIH8 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Solanum bulbocastanum OX=147425 GN=accD PE=3 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1   MSSSYRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTG 60
           MSSS RIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G
Sbjct: 253 MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIG 312

Query: 61  K 62
           +
Sbjct: 313 Q 313

[Close]

BLAST of ClCG06G002160 vs. ExPASy Swiss-Prot
Match: Q2MI91 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Solanum lycopersicum OX=4081 GN=accD PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1   MSSSYRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTG 60
           MSSS RIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEA+QTG G
Sbjct: 253 MSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIG 312

Query: 61  K 62
           +
Sbjct: 313 Q 313

[Close]

BLAST of ClCG06G002160 vs. ExPASy TrEMBL
Match: A0A0A0KDL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-53
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 103 MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 162
           M   R+ P+SGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI SSSSRILPSSQ+TPA
Sbjct: 1   MIMARQDPRSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMTPA 60

Query: 163 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 222
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YVVGIVS+LSMLGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCFTA 120

Query: 223 PTPRKDFHG 231
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of ClCG06G002160 vs. ExPASy TrEMBL
Match: A0A1S3CB48 (uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 8.4e-52
Identity = 114/129 (88.37%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 103 MSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAI-SSSSRILPSSQITPA 162
           M+  ++ P+SGVF+EISSLLLKILRSPPPPVPFSDHVLELSS I SSSSRILPSSQ+TPA
Sbjct: 1   MNMAQQDPRSGVFHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMTPA 60

Query: 163 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 222
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMI YVVGIVS+LS+LGRSL+CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCFTA 120

Query: 223 PTPRKDFHG 231
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

[Close]

BLAST of ClCG06G002160 vs. ExPASy TrEMBL
Match: A0A6J1DMY8 (uncharacterized protein LOC111022584 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022584 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 113/136 (83.09%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 102 VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPA 161
           +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPA
Sbjct: 1   MMRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPA 60

Query: 162 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 221
           G A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YVVGIVS+LSMLGRS+LCCF+A
Sbjct: 61  GLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSA 120

Query: 222 PTPRKDFHGEFLFSSC 238
           PTPRKDF+ +F F  C
Sbjct: 121 PTPRKDFNAQF-FHCC 135

[Close]

BLAST of ClCG06G002160 vs. ExPASy TrEMBL
Match: A0A6J1DPD1 (uncharacterized protein LOC111022584 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111022584 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51
Identity = 111/129 (86.05%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 102 VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPA 161
           +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPA
Sbjct: 1   MMRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPA 60

Query: 162 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 221
           G A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YVVGIVS+LSMLGRS+LCCF+A
Sbjct: 61  GLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSA 120

Query: 222 PTPRKDFHG 231
           PTPRKDF+G
Sbjct: 121 PTPRKDFNG 129

[Close]

BLAST of ClCG06G002160 vs. ExPASy TrEMBL
Match: A0A6J1DMF9 (uncharacterized protein LOC111022584 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022584 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 114/142 (80.28%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 102 VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAISSSSRILPSSQITPA 161
           +M RPRE PQS V +EISSLL+KILRSPPPPVPFSDHVLELSS ISSSS +LPSSQITPA
Sbjct: 1   MMRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPA 60

Query: 162 GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRSLLCCFTA 221
           G A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMI YVVGIVS+LSMLGRS+LCCF+A
Sbjct: 61  GLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCCFSA 120

Query: 222 PTPRKDFHGEFLFSSCLLVFIG 244
           PTPRKDF+ E     C+  F G
Sbjct: 121 PTPRKDFN-EGYERGCVSAFFG 141

[Close]

BLAST of ClCG06G002160 vs. TAIR 10
Match: AT1G27290.1 (unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.9 bits (315), Expect = 4.5e-29
Identity = 72/131 (54.96%), Postives = 95/131 (72.52%), Query Frame = 0


Query: 102 VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS-- 161
           +M R R+  QS VFY++SSL+L +LRSPP P+   DH  +  + I    SS R   SS  
Sbjct: 1   MMRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPS 60

Query: 162 --QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRS 221
              I+P+GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L L+++ YV GIVS +SM+GRS
Sbjct: 61  LAHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRS 120

Query: 222 LLC-CFTAPTP 225
           +LC   T P+P
Sbjct: 121 ILCYVLTPPSP 131

[Close]

BLAST of ClCG06G002160 vs. TAIR 10
Match: AT1G27290.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.9 bits (315), Expect = 4.5e-29
Identity = 72/131 (54.96%), Postives = 95/131 (72.52%), Query Frame = 0


Query: 102 VMSRPREHPQSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAIS---SSSRILPSS-- 161
           +M R R+  QS VFY++SSL+L +LRSPP P+   DH  +  + I    SS R   SS  
Sbjct: 1   MMRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPS 60

Query: 162 --QITPAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMICYVVGIVSTLSMLGRS 221
              I+P+GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L L+++ YV GIVS +SM+GRS
Sbjct: 61  LAHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRS 120

Query: 222 LLC-CFTAPTP 225
           +LC   T P+P
Sbjct: 121 ILCYVLTPPSP 131

[Close]

BLAST of ClCG06G002160 vs. TAIR 10
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta )

HSP 1 Score: 103.6 bits (257), Expect = 2.4e-22
Identity = 48/61 (78.69%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1   MSSSYRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAIQTGTG 60
           MSSS RIEL IDPGTW+PMDEDMVS DPI+FHS+EEPYK+RIDS Q+ TGLT+A+QTGTG
Sbjct: 256 MSSSERIELSIDPGTWNPMDEDMVSADPIKFHSKEEPYKNRIDSAQKTTGLTDAVQTGTG 315

Query: 61  K 62
           +
Sbjct: 316 Q 316

The following BLAST results are available for this feature:

BLAST of ClCG06G002160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014655.1	4.0e-56	83.33	hypothetical protein SDJN02_24834, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038875874.1	8.9e-56	92.97	uncharacterized protein LOC120068233 [Benincasa hispida]	[more]
XP_004151234.1	4.1e-53	91.47	uncharacterized protein LOC101208751 [Cucumis sativus] >KGN46462.1 hypothetical ...	[more]
XP_008459845.1	1.7e-51	88.37	PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo]	[more]
XP_022155438.1	3.0e-51	83.09	uncharacterized protein LOC111022584 isoform X1 [Momordica charantia]	[more]

BLAST of ClCG06G002160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09X08	1.5e-26	95.08	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q3C1J3	3.4e-26	93.44	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q33C25	3.4e-26	93.44	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q2MIH8	3.4e-26	93.44	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q2MI91	3.4e-26	93.44	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of ClCG06G002160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDL5	2.0e-53	91.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1	[more]
A0A1S3CB48	8.4e-52	88.37	uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=...	[more]
A0A6J1DMY8	1.4e-51	83.09	uncharacterized protein LOC111022584 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DPD1	3.2e-51	86.05	uncharacterized protein LOC111022584 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DMF9	1.2e-50	80.28	uncharacterized protein LOC111022584 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of ClCG06G002160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27290.1	4.5e-29	54.96	unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bac...	[more]
AT1G27290.2	4.5e-29	54.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
ATCG00500.1	2.4e-22	78.69	acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.226.10		coord: 1..68 e-value: 1.6E-13 score: 52.8
None	No IPR available	PANTHER	PTHR34781	TRANSMEMBRANE PROTEIN	coord: 103..230
None	No IPR available	PANTHER	PTHR34781:SF2	TRANSMEMBRANE PROTEIN	coord: 103..230
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 5..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G002160.2	ClCG06G002160.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane