ClCG06G001810 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G001810
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	small acidic protein-like isoform X2
Location	CG_Chr06: 1872802 .. 1874086 (-)
RNA-Seq Expression	ClCG06G001810
Synteny	ClCG06G001810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCATCTCTTCTTCTTCTTCTTCATCGAGATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAGTCTTTCCGTAACTTCACCCTCAACCACCGTCTAGCCTCGGCTGCCCCTTCCTCCGCCGGAGTTCGGAGGTCTCCGTCGTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCGACGACGATGACGAATCTCATCTTCCTCTTCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGGTCAGAATCACCATTACCGCCTTGCTTTTTCCTTTATTTTATTTTGTTTTGTTTTATTTGTTATGTGTTTTCGGTGTTTAATTAATTTGAATACCGAGTTCTCTTCTCTCCCTTTGATTTTCTTTGTCTTTTTCTCTCTTGATCCAGCTTCCGATTCCTTCGTTTTTTTCTTTCCTCTTCTTAACCTAACTTCATTTATTGCCAAAGGCCGCATATGGCAGATCTTTGCAAATTCTGTTGTCTTGTACTTTTGATTATTAATCTTTTTGATGATTGTTTCAGATGGAGCTTTCGTTTCTTTCTTTAATTAATGCGTTTCTGTATCCATATATTTGTCTTTATGATTAATGTTTTCCTTTTTCCATACATACTTCATCTTAGGATTCGGATTCCAAACCCTAGAATTAATTAATTTCATACTTGCTTTTATCGTCCGCCATTTTTCACTTCTCTTTTCGTACAACGCATCAGAGAGAAACTTTCTGGATTTTGGATTCTCCATTTCCTTTCGGTTTTTTCTCTTTTCTTTTGTTTCGATTTCTCCTCGGGAACATTAAATTAACATTTCGATTCAATTCCGTTTGGCTTTCTAGACAGGGGAAGTCTACTACAGAAACTGCCGGACTGGAATGAGAGTAAAGGAAGATCCAAGGACAGTGGAAGCACACAGCCGAGATTTATACTCAGAAGACGAAGACGACGACGATGATGAGACCTCGTCGGATGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATACCCGGCGGAAAACGTGGAGGATGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTATTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGACAATAATGGCTTTCCATGAACCAACGAACCACATTTTTCCGGAAAACAAAAAAAAAAAAAAAAAA

mRNA sequence

ATTTCATCTCTTCTTCTTCTTCTTCATCGAGATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAGTCTTTCCGTAACTTCACCCTCAACCACCGTCTAGCCTCGGCTGCCCCTTCCTCCGCCGGAGTTCGGAGGTCTCCGTCGTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCGACGACGATGACGAATCTCATCTTCCTCTTCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACAGAAACTGCCGGACTGGAATGAGAGTAAAGGAAGATCCAAGGACAGTGGAAGCACACAGCCGAGATTTATACTCAGAAGACGAAGACGACGACGATGATGAGACCTCGTCGGATGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATACCCGGCGGAAAACGTGGAGGATGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTATTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGACAATAATGGCTTTCCATGAACCAACGAACCACATTTTTCCGGAAAACAAAAAAAAAAAAAAAAAA

Coding sequence (CDS)

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCTCTTGAGCAGTCTTTCCGTAACTTCACCCTCAACCACCGTCTAGCCTCGGCTGCCCCTTCCTCCGCCGGAGTTCGGAGGTCTCCGTCGTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCGACGACGATGACGAATCTCATCTTCCTCTTCAACATAATCGCTTCGACACAATCTTGGAGCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACAGAAACTGCCGGACTGGAATGAGAGTAAAGGAAGATCCAAGGACAGTGGAAGCACACAGCCGAGATTTATACTCAGAAGACGAAGACGACGACGATGATGAGACCTCGTCGGATGGTGGAAGTGAGGAGTCGTGTTCTTCATCGTCGTACGGTGGTAGTAGACAGCAATACCCGGCGGAAAACGTGGAGGATGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTATTTCATGGTGCCGAAACAGGTCGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGACGACAATAATGGCTTTCCATGA

Protein sequence

MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHLPLQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLYSEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDRSDDNNGFP

Homology

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BLAST of ClCG06G001810 vs. NCBI nr
Match: XP_038906838.1 (uncharacterized protein LOC120092736 [Benincasa hispida])

HSP 1 Score: 362.5 bits (929), Expect = 2.5e-96
Identity = 190/207 (91.79%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRLASAA SSAGVRRSPSSFSSSSSSS    DDE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLASAAASSAGVRRSPSSFSSSSSSS----DDEPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHN+FDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRT EAHSRDL
Sbjct: 61  PLHQHNQFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTAEAHSRDL 120

Query: 121 YSEDEDDDD--DETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVP 180
           YSEDEDDD+  DE+SSDGGSEESCSSSSYGGSR+QYPAENVEDVLVVAGCKRCFMYFMVP
Sbjct: 121 YSEDEDDDEDGDESSSDGGSEESCSSSSYGGSRRQYPAENVEDVLVVAGCKRCFMYFMVP 180

Query: 181 KQVEDCPKCSSSRLVHFDRSDDNNGFP 205
           KQVEDCPKCSSSRLVHFDRSD++NGFP
Sbjct: 181 KQVEDCPKCSSSRLVHFDRSDESNGFP 203

[Close]

BLAST of ClCG06G001810 vs. NCBI nr
Match: KAA0039848.1 (uncharacterized protein E6C27_scaffold122G001230 [Cucumis melo var. makuwa] >TYK24651.1 uncharacterized protein E5676_scaffold266G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 362.1 bits (928), Expect = 3.2e-96
Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAPSSAGVRRSPSSFSSSSSSS    DDE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSS----DDEPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180
           YSED+ +D DE+SSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ
Sbjct: 121 YSEDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180

Query: 181 VEDCPKCSSSRLVHFDRSDDNNGFP 205
           VEDCPKCSSSRLVHFDRSD++NGFP
Sbjct: 181 VEDCPKCSSSRLVHFDRSDESNGFP 201

[Close]

BLAST of ClCG06G001810 vs. NCBI nr
Match: XP_004140554.1 (uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hypothetical protein Csa_005342 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 6.1e-95
Identity = 187/206 (90.78%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAPSSAGVRRSPSSFSSSSSSS    DDE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSS----DDEPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEDED-DDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK 180
           Y ED+D +D DE+SSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK
Sbjct: 121 YLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK 180

Query: 181 QVEDCPKCSSSRLVHFDRSDDNNGFP 205
           QVEDCPKCSSSRLVHFDRSD++NGFP
Sbjct: 181 QVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of ClCG06G001810 vs. NCBI nr
Match: XP_016902460.1 (PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo])

HSP 1 Score: 352.1 bits (902), Expect = 3.3e-93
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAPSSAGVRRSPSSFSSSSSSS    DDE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSS----DDEPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180
           YSED+ +D DE+SSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ
Sbjct: 121 YSEDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180

Query: 181 VEDCPKCSSSRLVHFDRSDD 200
           VEDCPKCSSSRLVHFDRSD+
Sbjct: 181 VEDCPKCSSSRLVHFDRSDE 196

[Close]

BLAST of ClCG06G001810 vs. NCBI nr
Match: KAG6576106.1 (hypothetical protein SDJN03_26745, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014626.1 hypothetical protein SDJN02_24805 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.0 bits (824), Expect = 3.7e-84
Identity = 172/206 (83.50%), Postives = 179/206 (86.89%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFR F+LNHRL SAAP SAGVRR         SSSSS   DE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAP-SAGVRR---------SSSSSSSADERHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QH+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRV EDPRT EAHSRDL
Sbjct: 61  PLNQHHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDL 120

Query: 121 YSEDEDDDD-DETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK 180
           YSED+DD+D DE+SSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPK
Sbjct: 121 YSEDDDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPK 180

Query: 181 QVEDCPKCSSSRLVHFDRSDDNNGFP 205
           QVEDCPKCSSSRLVHFDRS+D+NGFP
Sbjct: 181 QVEDCPKCSSSRLVHFDRSEDSNGFP 196

[Close]

BLAST of ClCG06G001810 vs. ExPASy TrEMBL
Match: A0A5A7TA84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002010 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAPSSAGVRRSPSSFSSSSSSS    DDE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSS----DDEPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180
           YSED+ +D DE+SSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ
Sbjct: 121 YSEDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180

Query: 181 VEDCPKCSSSRLVHFDRSDDNNGFP 205
           VEDCPKCSSSRLVHFDRSD++NGFP
Sbjct: 181 VEDCPKCSSSRLVHFDRSDESNGFP 201

[Close]

BLAST of ClCG06G001810 vs. ExPASy TrEMBL
Match: A0A0A0KF89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.9e-95
Identity = 187/206 (90.78%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAPSSAGVRRSPSSFSSSSSSS    DDE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSS----DDEPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEDED-DDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK 180
           Y ED+D +D DE+SSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK
Sbjct: 121 YLEDDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK 180

Query: 181 QVEDCPKCSSSRLVHFDRSDDNNGFP 205
           QVEDCPKCSSSRLVHFDRSD++NGFP
Sbjct: 181 QVEDCPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of ClCG06G001810 vs. ExPASy TrEMBL
Match: A0A1S4E3A8 (uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.6e-93
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFRNF+LNHRL+SAAPSSAGVRRSPSSFSSSSSSS    DDE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSS----DDEPHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+VKEDPRT  AHSRDL
Sbjct: 61  PLHQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDL 120

Query: 121 YSEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180
           YSED+ +D DE+SSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ
Sbjct: 121 YSEDDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQ 180

Query: 181 VEDCPKCSSSRLVHFDRSDD 200
           VEDCPKCSSSRLVHFDRSD+
Sbjct: 181 VEDCPKCSSSRLVHFDRSDE 196

[Close]

BLAST of ClCG06G001810 vs. ExPASy TrEMBL
Match: A0A6J1GM82 (uncharacterized protein LOC111455780 OS=Cucurbita moschata OX=3662 GN=LOC111455780 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.8e-84
Identity = 171/206 (83.01%), Postives = 179/206 (86.89%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFR F+LNHRL SAAP SAGVRR         SSSSS   DE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAP-SAGVRR---------SSSSSSSADERHL 60

Query: 61  PL-QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDL 120
           PL QH+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRV EDPRT EAHSRDL
Sbjct: 61  PLNQHHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDL 120

Query: 121 YSEDEDDDD-DETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK 180
           YSED+D++D DE+SSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPK
Sbjct: 121 YSEDDDENDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPK 180

Query: 181 QVEDCPKCSSSRLVHFDRSDDNNGFP 205
           QVEDCPKCSSSRLVHFDRS+D+NGFP
Sbjct: 181 QVEDCPKCSSSRLVHFDRSEDSNGFP 196

[Close]

BLAST of ClCG06G001810 vs. ExPASy TrEMBL
Match: A0A6J1JMX9 (uncharacterized protein LOC111488350 OS=Cucurbita maxima OX=3661 GN=LOC111488350 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.9e-82
Identity = 168/207 (81.16%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MKSPDMAAVTDSLEQSFR F+LNHRL S AP SAGVRR         SSSSS   DE HL
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSPAP-SAGVRR---------SSSSSSSADERHL 60

Query: 61  PL--QHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRD 120
           PL   H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRV EDPRT EAH RD
Sbjct: 61  PLHHHHHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHGRD 120

Query: 121 LYSEDEDDDD-DETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVP 180
           LYSED+DD+D DE+SSD  SEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVP
Sbjct: 121 LYSEDDDDNDADESSSDDSSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVP 180

Query: 181 KQVEDCPKCSSSRLVHFDRSDDNNGFP 205
           KQVEDCPKCSSSRLVHFDRS+D+NGFP
Sbjct: 181 KQVEDCPKCSSSRLVHFDRSEDSNGFP 197

[Close]

BLAST of ClCG06G001810 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). )

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-34
Identity = 97/204 (47.55%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MK+P+M  +T+SLE+S  N +LN R           R     F  SSS       +E   
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRR---------RVVGDGFGRSSS-------NEHMT 60

Query: 61  PLQHNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTV---EAHSR 120
           P+     D  LELNSH+SLP  WEQCLDLKTGE+YY N + GMRVKEDPR V   +  S 
Sbjct: 61  PIS----DRTLELNSHLSLPCHWEQCLDLKTGEIYYINWKNGMRVKEDPRKVMNADPDSG 120

Query: 121 DLY-----SEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFM 180
           D Y      ED    D E SS   S  S  +       ++   E  EDVLVVAGCK CFM
Sbjct: 121 DSYGTVCSEEDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKACFM 180

Query: 181 YFMVPKQVEDCPKCSSSRLVHFDR 197
           YFMVPK VEDCPKC +++L+HFDR
Sbjct: 181 YFMVPKLVEDCPKC-AAQLLHFDR 183

[Close]

BLAST of ClCG06G001810 vs. TAIR 10
Match: AT2G33510.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). )

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31
Identity = 97/219 (44.29%), Postives = 116/219 (52.97%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHL 60
           MK+P+M  +T+SLE+S  N +LN R           R     F  SSS       +E   
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRR---------RVVGDGFGRSSS-------NEHMT 60

Query: 61  PLQHNRFDTILELNSHISLPPFWEQCLDLK---------------TGEVYYRNCRTGMRV 120
           P+     D  LELNSH+SLP  WEQCLDLK               TGE+YY N + GMRV
Sbjct: 61  PIS----DRTLELNSHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRV 120

Query: 121 KEDPRTV---EAHSRDLY-----SEDEDDDDDETSSDGGSEESCSSSSYGGSRQQYPAEN 180
           KEDPR V   +  S D Y      ED    D E SS   S  S  +       ++   E 
Sbjct: 121 KEDPRKVMNADPDSGDSYGTVCSEEDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEE 180

Query: 181 VEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDR 197
            EDVLVVAGCK CFMYFMVPK VEDCPKC +++L+HFDR
Sbjct: 181 EEDVLVVAGCKACFMYFMVPKLVEDCPKC-AAQLLHFDR 198

[Close]

BLAST of ClCG06G001810 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 87/198 (43.94%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 6   MAAVTDSLEQSFRNFTLNHRLASAAPSSAGVRRSPSSFSSSSSSSSSDDDDESHLPLQHN 65
           MA +T+ LE+S +N +L  R +S              F  S          + H+P+   
Sbjct: 1   MADITEYLERSMQNCSLIDRRSSMG----------DGFGMS----------DEHIPIS-- 60

Query: 66  RFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRTVEAHSRDLYSEDED 125
             D  LEL+SH S+P   EQCLDLKTGE+YYR+  +GMRVKEDPR  ++ SR  Y++   
Sbjct: 61  --DRFLELSSHFSVPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPR--KSMSRGNYADQSS 120

Query: 126 DD-------DDETSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPK 185
            +        +E SS   SEES S SS   SR+ +  E  EDVLVVAGCK C MYFMVPK
Sbjct: 121 GESSGTVFSSEEVSSYYESEESSSESS-PSSRKYHKEEQDEDVLVVAGCKACLMYFMVPK 170

Query: 186 QVEDCPKCSSSRLVHFDR 197
             +DCPKC +++L+HFD+
Sbjct: 181 LFKDCPKC-ATQLLHFDQ 170

The following BLAST results are available for this feature:

BLAST of ClCG06G001810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906838.1	2.5e-96	91.79	uncharacterized protein LOC120092736 [Benincasa hispida]	[more]
KAA0039848.1	3.2e-96	91.22	uncharacterized protein E6C27_scaffold122G001230 [Cucumis melo var. makuwa] >TYK...	[more]
XP_004140554.1	6.1e-95	90.78	uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hypothetical ...	[more]
XP_016902460.1	3.3e-93	91.50	PREDICTED: uncharacterized protein LOC103498882 [Cucumis melo]	[more]
KAG6576106.1	3.7e-84	83.50	hypothetical protein SDJN03_26745, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG06G001810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G001810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TA84	1.6e-96	91.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KF89	2.9e-95	90.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1	[more]
A0A1S4E3A8	1.6e-93	91.50	uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=...	[more]
A0A6J1GM82	6.8e-84	83.01	uncharacterized protein LOC111455780 OS=Cucurbita moschata OX=3662 GN=LOC1114557...	[more]
A0A6J1JMX9	4.9e-82	81.16	uncharacterized protein LOC111488350 OS=Cucurbita maxima OX=3661 GN=LOC111488350...	[more]

BLAST of ClCG06G001810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33510.1	2.2e-34	47.55	CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis t...	[more]
AT2G33510.2	2.3e-31	44.29	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_c...	[more]
AT1G28070.1	1.0e-28	43.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.20.70.10		coord: 78..115 e-value: 4.1E-5 score: 25.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..135
None	No IPR available	PANTHER	PTHR14791:SF48	BNAC03G58250D PROTEIN	coord: 48..198
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 48..198
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 75..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G001810.1	ClCG06G001810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding