ClCG06G001490 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G001490
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	DNA ligase 1
Location	CG_Chr06: 1544091 .. 1549612 (-)
RNA-Seq Expression	ClCG06G001490
Synteny	ClCG06G001490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTTATCCAAATAGAAAATAATAGATGTGGAAAATTGATATATTTAGCTACTTACGAAATTTCAGAATTTAAATTTATACAACCCCAAAGTTTAGGAGTGTAGATTAATATTTTCCTTAAAAATATATACACACATATATAAACAACTCGTATCTTTACCACCTAAGTTACAATTATTACACCAAAGTGAGCATAGTCTAATTAATATACGGATATCTGGTTCGAATTCCGACATTTTGTTAGATGAAGATAGAGATCAACCTCGAAACCACATTAGGAAAAAAAGAAAAAAAAAAAGTTTATCCGTTTTATAAAACTATAATATTGATGTAATTGGTCCGAGAGAATTTATTGTGCAGTTGTAGGGTGTGGCGGTTAGGGTTCCAAATTCCAACAAGAATAACGCGATCTCCAACGGTCACTTACTTACTCACATAATATAATAATAACAAATTAAATTAAAATTAATAACTCAAAAAGAAAAGAAAAGAAACCCATTAGCTCTCCGCTCCAAATTTAAAATTTCCAGATCTTTTCCTTTTCCCTTTCAAACGAGAAGGACTACCAAAGTTCCATGAAACCCCATTATTAATTTCCAGATCTTCTTCTTCTTCTTCCAAGTAATTTCAGTTACATAGTGATGGGTTGCTTTTTTGCTTTATTTGGTTCATCCAAACATTCCAAACGCCTCAAGAATCATCACAAATCTCCACATACGCACCATCAATCCACAATTCAGGTTCTTAATCTTCTTTCTTTTTCGACCAATTTTTTCAAAACCAAACCCTAGAAAACTCGGCCAACAATTTCGTTCTAATTTCTGACTAATTTTGATGTTGGTTTGGTGCAGAGGAATGCAATCCCTAAACCCGCCCAATCTTCTGTTCATACGCTGCCTCATGACTCTAACAGCAAAATCATGCAATTGGTTGAAGCTGGGTGAGTACTTCAAATTTCTAATGCTAATTTTATTTTTTTGGTTAACCTACGGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTCCTCCTCCTCCTCAAGTTAAAATAGATGAAAATTGATGCAATGACTAAGGTGTAAAAATTGAAACTTGTGCATAACCTTTTGACATGGAAATTAATTATGTAAATAAATTTTAACCGTATATTTTTGGGATGAAATAAATGAACGGTTACCATTCATTTAGTTATAAGTTTCAAAATTTTACACTTTTATTTGTTTTTAGTACAACAATTGCACGATGGAGGACTGGCCCTCCGACTTCTAGAGATGCATTGTATGACAATATCATTAAGCCAAACTCACTTTGACAATTTACCTTTTAAGTTTTGAGTTTAATTTTTATTTGATTTTTAGGTTTTAAAATGTTACATTTGTACCTTGAATTTTGAGTTTAAATTTTTTACTTAGGTTTCAATATTTTACCACTTTGCCTCCATTTTTACTGGTGATCACATTGAGTCTTTGACATTAAATTCTTAGTTAATTCATTTAAAATAATTTTGAAGTAAAATTTTTTAATTAATTGTAATAATAATGAAAATTAGCAAATTAATTTAAGGGTTGTTTTTAAATATGACAAAATGAGCCAAACATTTACAAATATAGAAAATTTTCACTATCTATCAGTGATAGACTGCAATAGACTTCTAACATTCAAGCGATAAAAGTTTGTTGCAATCTATCGCTGATAAGCATTGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTTATATTTATAATAATTTTTCTTCATTTAATTATTTTAAATTAATTGATAGACATTAACTTTAAGGACTAAAATAGAGTATTTAGTGAAAATTCAAGGGTAACTATGTAACATTTTGAAATCTATGTACCGCCGAAAAACTAGACTCAAAACAAAATGAAAAATATTTTTTTTGAACTAATTTTAAAGTCCAACGATAAAAATAGAACTTTTTAAGAACATAAGTGAAACCGAAGCACATATACAAATTCAAGACACGTATACGACACAACATGGACATGACAACAATTTTCAAAAAAAATTTAGGACATGGACACAGAAAGGACACGTTTATTAAAATATACATTTTTAAAATCATTTTTAAACCATAAAGAAATTAGAAAATCAATGAGTTAATACATTATACTTAAAGAATTAGTTTTATGTATTTCACTGTAAAATTTTATTATTTCTATCATATGTGTCTATTTAGTAGATGATGAATTTCTAATAAATGTTGGCTCTATTTTGACTTCATACAACTAGTGTTTAACACATCTATTACACTACAAAGTGTTCGATCTGCCAACGAGTGTCAAATTTGCTAAGTGTCCTATTGGACATAGACACATTAGCTAAACTAACGTATTGTGCTTCTTAGAGTGAAACCTACCTCTACGAAGTTTTTTGTATAATGTAACCCAATTCTTTTTTTTCTTTTACAATTTTGATTTTGGTTTTTGGTTACAAATAAGAATGATGTGGGCTTATGATCATAGGAATAGGTGTTATGGGTCAGAAGTGACTTCTGTGAAACCCCATGAGGATGAGCATATTGTTTTACCTCAAGAAGATGCTGCTTCAGTTCATGGCAAGAAACAAGGCCTGAATGAGGAAGAAGACAGTGTGGAAACGTTAAGCAAACCTGAATCGTCATCTGAAGATTTTGTTGTTCCTCTCAATCCCAACTTCAAATCATCTTGCCCTCCAATTCATCGATACAGGAACTGTAAGGATAGTGATGATGAGGATGATGTTTCAGATAGTCATCTTGCTAGTGATGAAAATGGTGAATTTGGAATGGTTGAATCACTGCAGGAAGATTCTTCTGTAGCTGAAAGTTCAATGAATGTTTGTAGGCTAAACCCAACAAATGTGAGGCATAGGACTGCATATGTTTGCTCTGTACTGAATCCAGTTGAAAATCTTTCTCAATGGAATGCTGTGAAATCAAAGAAGGAATTTCCATCAACACTTCAGAAAGAGAATGTGGAGTTGGAACAAGAATCAAGTGTTGAGGAATTTTCATACAGCAGTTCCAAGCCGAGTCGAGAACCGTGTGTCGATGCCAGCCTTTCTAACTGGTTGAATTCATCAGAAGCAACACCAGTCAGTAAGCTTACTGCAACAATGGCTTTAGAAGCCACCATTACTCCAGTGAAAAGTGGGACATTGCAAGGATCGAGCCCGATGAAAAGAAGCGGCCACGGCGAGATGCCTGAAGTTGGAACGGTTGGTATGTATTGCAGGCAAGGAGTGACGAGTTATAAGGATCGTGATTCGGCTTCTTCGTTTAAAGGAATACCAAATACAACTAGCAAGTACAGAGAGGTATTGATTTGAAGTAGTTATTATTTGAAGGGTTTTGTATAGAATGACTTTCTAAGCACTTAAAAATGTATTTTTAAGCAAAAAATAATGTCAGGTGAAACTAAGTTGTTTTGTTTGTGAGTGCAGGATAAGACAGTGAATTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTTTGAATAGTAGAGTTAGAGGAGTTGTAGCTTGAAGCTTTTGGAGCACTGTTATTTGTTGTCAACTGTTTGGTTTTTTTCTATTTGGTTGTGTGTGTATAGCCTAATTATATGGATTTGTTTGTAAATCAGTTGTCCACTCTTTGATTTGTTTTAACCTGCTGTGGGGCTGTATTCCCATGTAATTTACCTACAACAAATTGTCTCAAGGATATCATTGCCCTTTTATTGTTAATATTATGGAATTAATCGATTTTGGGCTT

mRNA sequence

ATGATATCTTCTTCTTCTTCTTCCAATTACATAGTGATGGGTTGCTTTTTTGCTTTATTTGGTTCATCCAAACATTCCAAACGCCTCAAGAATCATCACAAATCTCCACATACGCACCATCAATCCACAATTCAGAGGAATGCAATCCCTAAACCCGCCCAATCTTCTGTTCATACGCTGCCTCATGACTCTAACAGCAAAATCATGCAATTGGTTGAAGCTGGAATGATGTGGGCTTATGATCATAGGAATAGGTGTTATGGGTCAGAAGTGACTTCTGTGAAACCCCATGAGGATGAGCATATTGTTTTACCTCAAGAAGATGCTGCTTCAGTTCATGGCAAGAAACAAGGCCTGAATGAGGAAGAAGACAGTGTGGAAACGTTAAGCAAACCTGAATCGTCATCTGAAGATTTTGTTGTTCCTCTCAATCCCAACTTCAAATCATCTTGCCCTCCAATTCATCGATACAGGAACTGTAAGGATAGTGATGATGAGGATGATGTTTCAGATAGTCATCTTGCTAGTGATGAAAATGGTGAATTTGGAATGGTTGAATCACTGCAGGAAGATTCTTCTGTAGCTGAAAGTTCAATGAATGTTTGTAGGCTAAACCCAACAAATGTGAGGCATAGGACTGCATATGTTTGCTCTGTACTGAATCCAGTTGAAAATCTTTCTCAATGGAATGCTGTGAAATCAAAGAAGGAATTTCCATCAACACTTCAGAAAGAGAATGTGGAGTTGGAACAAGAATCAAGTGTTGAGGAATTTTCATACAGCAGTTCCAAGCCGAGTCGAGAACCGTGTGTCGATGCCAGCCTTTCTAACTGGTTGAATTCATCAGAAGCAACACCAGTCAGTAAGCTTACTGCAACAATGGCTTTAGAAGCCACCATTACTCCAGTGAAAAGTGGGACATTGCAAGGATCGAGCCCGATGAAAAGAAGCGGCCACGGCGAGATGCCTGAAGTTGGAACGGTTGGTATGTATTGCAGGCAAGGAGTGACGAGTTATAAGGATCGTGATTCGGCTTCTTCGTTTAAAGGAATACCAAATACAACTAGCAAGTACAGAGAGGATAAGACAGTGAATTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTTTGAATAGTAGAGTTAGAGGAGTTGTAGCTTGAAGCTTTTGGAGCACTGTTATTTGTTGTCAACTGTTTGGTTTTTTTCTATTTGGTTGTGTGTGTATAGCCTAATTATATGGATTTGTTTGTAAATCAGTTGTCCACTCTTTGATTTGTTTTAACCTGCTGTGGGGCTGTATTCCCATGTAATTTACCTACAACAAATTGTCTCAAGGATATCATTGCCCTTTTATTGTTAATATTATGGAATTAATCGATTTTGGGCTT

Coding sequence (CDS)

ATGATATCTTCTTCTTCTTCTTCCAATTACATAGTGATGGGTTGCTTTTTTGCTTTATTTGGTTCATCCAAACATTCCAAACGCCTCAAGAATCATCACAAATCTCCACATACGCACCATCAATCCACAATTCAGAGGAATGCAATCCCTAAACCCGCCCAATCTTCTGTTCATACGCTGCCTCATGACTCTAACAGCAAAATCATGCAATTGGTTGAAGCTGGAATGATGTGGGCTTATGATCATAGGAATAGGTGTTATGGGTCAGAAGTGACTTCTGTGAAACCCCATGAGGATGAGCATATTGTTTTACCTCAAGAAGATGCTGCTTCAGTTCATGGCAAGAAACAAGGCCTGAATGAGGAAGAAGACAGTGTGGAAACGTTAAGCAAACCTGAATCGTCATCTGAAGATTTTGTTGTTCCTCTCAATCCCAACTTCAAATCATCTTGCCCTCCAATTCATCGATACAGGAACTGTAAGGATAGTGATGATGAGGATGATGTTTCAGATAGTCATCTTGCTAGTGATGAAAATGGTGAATTTGGAATGGTTGAATCACTGCAGGAAGATTCTTCTGTAGCTGAAAGTTCAATGAATGTTTGTAGGCTAAACCCAACAAATGTGAGGCATAGGACTGCATATGTTTGCTCTGTACTGAATCCAGTTGAAAATCTTTCTCAATGGAATGCTGTGAAATCAAAGAAGGAATTTCCATCAACACTTCAGAAAGAGAATGTGGAGTTGGAACAAGAATCAAGTGTTGAGGAATTTTCATACAGCAGTTCCAAGCCGAGTCGAGAACCGTGTGTCGATGCCAGCCTTTCTAACTGGTTGAATTCATCAGAAGCAACACCAGTCAGTAAGCTTACTGCAACAATGGCTTTAGAAGCCACCATTACTCCAGTGAAAAGTGGGACATTGCAAGGATCGAGCCCGATGAAAAGAAGCGGCCACGGCGAGATGCCTGAAGTTGGAACGGTTGGTATGTATTGCAGGCAAGGAGTGACGAGTTATAAGGATCGTGATTCGGCTTCTTCGTTTAAAGGAATACCAAATACAACTAGCAAGTACAGAGAGGATAAGACAGTGAATTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTTTGAATAGTAGAGTTAGAGGAGTTGTAGCTTGA

Protein sequence

MISSSSSSNYIVMGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLVEAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKPESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSDDEDDVSDSHLASDENGEFGMVESLQEDSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELEQESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQGSSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLERALNSRVRGVVA

Homology

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BLAST of ClCG06G001490 vs. NCBI nr
Match: XP_038874798.1 (protein JASON-like isoform X1 [Benincasa hispida] >XP_038874799.1 protein JASON-like isoform X1 [Benincasa hispida])

HSP 1 Score: 573.9 bits (1478), Expect = 1.0e-159
Identity = 313/379 (82.59%), Postives = 327/379 (86.28%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGS K  KRLKNHHKS H+HH STIQ NAIPKPAQSSV TLP DSN+K +QLV
Sbjct: 1   MGCFFACFGSFKDPKRLKNHHKSSHSHHPSTIQSNAIPKPAQSSVPTLPDDSNNKFLQLV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKP 132
           E G        NR  GSE+TSVKPHEDEHI LPQEDAASVH KKQ L +EE+SVE  SKP
Sbjct: 61  EPG--------NRRDGSEITSVKPHEDEHIALPQEDAASVHSKKQCLKKEEESVEKSSKP 120

Query: 133 ESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSDDEDDVSDSHLASDENGEFGMVESLQEDS 192
           ESS+E+FVVPLNPNFKSS PPIHRY NCKDSDDED+V DSHLASDEN EFGMVES++EDS
Sbjct: 121 ESSTENFVVPLNPNFKSSFPPIHRYMNCKDSDDEDEVFDSHLASDENDEFGMVESMKEDS 180

Query: 193 SVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELEQE 252
           SVAESS NV RLNPTNVRHRTAY C+VLNPVENLSQWNAVKSKKEFPST QKENVELEQE
Sbjct: 181 SVAESSENVGRLNPTNVRHRTAYFCNVLNPVENLSQWNAVKSKKEFPSTPQKENVELEQE 240

Query: 253 SSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATM---ALEATITPVKSGTLQ 312
           SSVEEF YSSSKPSRE CVDASLSNWL SSEATPVSK+TATM    LEATITPVKSGTLQ
Sbjct: 241 SSVEEFPYSSSKPSREVCVDASLSNWLASSEATPVSKITATMGLETLEATITPVKSGTLQ 300

Query: 313 GSSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHST 372
           GSS +KR G GEMPEVG V MYCRQGV S KDRDSASSFKGIPNTTSKYREDKTV WHST
Sbjct: 301 GSSSVKRIGRGEMPEVGKVRMYCRQGV-SDKDRDSASSFKGIPNTTSKYREDKTVKWHST 360

Query: 373 PFETRLERALNSRVRGVVA 389
           PFETRLERALNS  RGVVA
Sbjct: 361 PFETRLERALNS--RGVVA 368

[Close]

BLAST of ClCG06G001490 vs. NCBI nr
Match: XP_038874800.1 (protein JASON-like isoform X2 [Benincasa hispida])

HSP 1 Score: 569.3 bits (1466), Expect = 2.5e-158
Identity = 311/379 (82.06%), Postives = 325/379 (85.75%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGS K  KRLKNHHKS H+HH STIQ NAIPKPAQSSV TLP DSN+K +QLV
Sbjct: 1   MGCFFACFGSFKDPKRLKNHHKSSHSHHPSTIQSNAIPKPAQSSVPTLPDDSNNKFLQLV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKP 132
           E G            GSE+TSVKPHEDEHI LPQEDAASVH KKQ L +EE+SVE  SKP
Sbjct: 61  EPGR----------DGSEITSVKPHEDEHIALPQEDAASVHSKKQCLKKEEESVEKSSKP 120

Query: 133 ESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSDDEDDVSDSHLASDENGEFGMVESLQEDS 192
           ESS+E+FVVPLNPNFKSS PPIHRY NCKDSDDED+V DSHLASDEN EFGMVES++EDS
Sbjct: 121 ESSTENFVVPLNPNFKSSFPPIHRYMNCKDSDDEDEVFDSHLASDENDEFGMVESMKEDS 180

Query: 193 SVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELEQE 252
           SVAESS NV RLNPTNVRHRTAY C+VLNPVENLSQWNAVKSKKEFPST QKENVELEQE
Sbjct: 181 SVAESSENVGRLNPTNVRHRTAYFCNVLNPVENLSQWNAVKSKKEFPSTPQKENVELEQE 240

Query: 253 SSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATM---ALEATITPVKSGTLQ 312
           SSVEEF YSSSKPSRE CVDASLSNWL SSEATPVSK+TATM    LEATITPVKSGTLQ
Sbjct: 241 SSVEEFPYSSSKPSREVCVDASLSNWLASSEATPVSKITATMGLETLEATITPVKSGTLQ 300

Query: 313 GSSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHST 372
           GSS +KR G GEMPEVG V MYCRQGV S KDRDSASSFKGIPNTTSKYREDKTV WHST
Sbjct: 301 GSSSVKRIGRGEMPEVGKVRMYCRQGV-SDKDRDSASSFKGIPNTTSKYREDKTVKWHST 360

Query: 373 PFETRLERALNSRVRGVVA 389
           PFETRLERALNS  RGVVA
Sbjct: 361 PFETRLERALNS--RGVVA 366

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BLAST of ClCG06G001490 vs. NCBI nr
Match: XP_011656777.1 (uncharacterized protein LOC101205962 isoform X1 [Cucumis sativus])

HSP 1 Score: 519.6 bits (1337), Expect = 2.3e-143
Identity = 292/380 (76.84%), Postives = 313/380 (82.37%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK+SKRLKNHH S      + IQRNAI K  QSSVHTL  DSN+ +   V
Sbjct: 1   MGCFFACFGSSKNSKRLKNHHPS------TVIQRNAIAKTHQSSVHTLLDDSNNTLFHPV 60

Query: 73  EAGMM--WAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLS 132
           EAG     AYDHRNR  G EV SVK HEDEHIVLPQ+DA SVHGKKQG  EEEDS E LS
Sbjct: 61  EAGNKNNEAYDHRNRIDGLEVASVKSHEDEHIVLPQQDAVSVHGKKQGQKEEEDSEEKLS 120

Query: 133 KPESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD--DEDDVSDSHLASDENGEFGMVESL 192
           K ESSSEDFVVPLN NFKSSCP IHRY NCKDSD  DED+V D+HL SDEN E G+VES+
Sbjct: 121 KSESSSEDFVVPLNANFKSSCPRIHRYGNCKDSDDEDEDEVFDTHLDSDENDELGIVESM 180

Query: 193 QEDSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVE 252
           +EDSSV ESSM+VCRLNPTNVRHRTAYV SVLNPVENLSQWNAVKSKKEFP  LQKEN +
Sbjct: 181 KEDSSVDESSMDVCRLNPTNVRHRTAYVSSVLNPVENLSQWNAVKSKKEFPPKLQKENAK 240

Query: 253 LEQESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTL 312
           LEQESSV+ F Y SS+PS EPCVDASLSNWL SS+ATPV K+T TMALEAT+TP+KSGTL
Sbjct: 241 LEQESSVDGFPY-SSEPSGEPCVDASLSNWLPSSQATPV-KITPTMALEATMTPLKSGTL 300

Query: 313 QGSSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHS 372
           QGSS +K SGH +M EVGT GMY RQGV S+KD DSASSFKGIPNTTSKYREDKTV WHS
Sbjct: 301 QGSSSLKGSGHSKMSEVGTAGMYHRQGV-SHKDCDSASSFKGIPNTTSKYREDKTVKWHS 360

Query: 373 TPFETRLERALNSRVRGVVA 389
           TPFETRLERALNS  RGV A
Sbjct: 361 TPFETRLERALNS--RGVAA 369

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BLAST of ClCG06G001490 vs. NCBI nr
Match: KAA0039885.1 (DNA ligase 1 [Cucumis melo var. makuwa] >TYK24617.1 DNA ligase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 518.5 bits (1334), Expect = 5.1e-143
Identity = 290/378 (76.72%), Postives = 309/378 (81.75%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK+SKRLKNH      HH + IQRNAI K  QSSVHTL  DSN+     V
Sbjct: 1   MGCFFACFGSSKNSKRLKNH------HHSTIIQRNAIAKTHQSSVHTLLDDSNNTFFHPV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKP 132
           E G        NR  G EV SVK HEDEHIVLPQ+D  SVHGKKQG  EEEDS E LSK 
Sbjct: 61  EVG--------NRIDGLEVASVKHHEDEHIVLPQQDVVSVHGKKQGQKEEEDSEEKLSKS 120

Query: 133 ESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD--DEDDVSDSHLASDENGEFGMVESLQE 192
           ESSSEDFVVPLNPNFKSSCP IHRYRNCKDSD  DED+V D+HL SDEN E G+VES++E
Sbjct: 121 ESSSEDFVVPLNPNFKSSCPRIHRYRNCKDSDNEDEDEVFDTHLGSDENDELGIVESMKE 180

Query: 193 DSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELE 252
           DSS+ ESSM+VCRLNPTNVRHRTAYV SVLNPVENLSQWNAVKSKKEF   LQKENVELE
Sbjct: 181 DSSLDESSMDVCRLNPTNVRHRTAYVYSVLNPVENLSQWNAVKSKKEFSPKLQKENVELE 240

Query: 253 QESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQG 312
           QESSV+ F Y SS+PSREPCVDASLSNWL SS+ATPVSK+T TMALEATITP+KSGTLQG
Sbjct: 241 QESSVDGFPY-SSEPSREPCVDASLSNWLPSSQATPVSKITPTMALEATITPLKSGTLQG 300

Query: 313 SSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 372
           SS +K SG  +M EVGT  MY RQGV S+KDRDSASSFKGIPNTTSKYREDKTVNWHSTP
Sbjct: 301 SSSLKGSGDSKMSEVGTARMYRRQGV-SHKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 360

Query: 373 FETRLERALNSRVRGVVA 389
           FETRLERALNS  RGV A
Sbjct: 361 FETRLERALNS--RGVAA 360

[Close]

BLAST of ClCG06G001490 vs. NCBI nr
Match: XP_008459951.1 (PREDICTED: uncharacterized protein LOC103498917 isoform X1 [Cucumis melo])

HSP 1 Score: 513.5 bits (1321), Expect = 1.6e-141
Identity = 288/378 (76.19%), Postives = 308/378 (81.48%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK+SKRLKNHH S      + IQRNAI K  QSSVHTL  DSN+     V
Sbjct: 1   MGCFFACFGSSKNSKRLKNHHPS------TIIQRNAIAKTHQSSVHTLLDDSNNTFFHPV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKP 132
           + G        NR  G EV SVK HEDEHIVLPQ+D  SVHGKKQG  EEEDS E LSK 
Sbjct: 61  KVG--------NRIDGLEVASVKHHEDEHIVLPQQDVVSVHGKKQGQKEEEDSEEKLSKS 120

Query: 133 ESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD--DEDDVSDSHLASDENGEFGMVESLQE 192
           ESSSEDFVVPLNPNFKSSCP IHRYRNCKDSD  DED+V D+HL SDEN E G+VES++E
Sbjct: 121 ESSSEDFVVPLNPNFKSSCPRIHRYRNCKDSDDEDEDEVFDTHLGSDENDELGIVESMKE 180

Query: 193 DSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELE 252
           DSS+ ESSM+VCRLNPTNVRHRTAYV SVLNPVENLSQWNAVKSKKEF   LQKENVELE
Sbjct: 181 DSSLDESSMDVCRLNPTNVRHRTAYVYSVLNPVENLSQWNAVKSKKEFSPKLQKENVELE 240

Query: 253 QESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQG 312
           QESSV+ F Y SS+PSREPCVDASLSNWL SS+ATPVSK+T TMALEATITP+KSG LQG
Sbjct: 241 QESSVDGFPY-SSEPSREPCVDASLSNWLPSSQATPVSKITPTMALEATITPLKSGNLQG 300

Query: 313 SSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 372
           SS +K SG  +M EVGT  MY RQGV S+KDRDSASSFKGIPNTTSKYREDKTVNWHSTP
Sbjct: 301 SSSLKGSGDSKMSEVGTARMYRRQGV-SHKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 360

Query: 373 FETRLERALNSRVRGVVA 389
           FETRLERALNS  RGV A
Sbjct: 361 FETRLERALNS--RGVAA 360

[Close]

BLAST of ClCG06G001490 vs. ExPASy Swiss-Prot
Match: F4IDQ5 (Protein JASON OS=Arabidopsis thaliana OX=3702 GN=JASON PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.2e-07
Identity = 55/175 (31.43%), Postives = 81/175 (46.29%), Query Frame = 0


Query: 210 RHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELEQESSVEEFSYSSSKPSREP 269
           R R+ +V SV N +EN S +   K   E      +E +E E  SS E +     + S E 
Sbjct: 290 RIRSQFVHSVSNIMENASLYKVYKDSHE--GLDYEEQIEAETPSS-ETYGEKVEESSDEK 349

Query: 270 C--VDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQGSSPMKRSGHGEMPEVGT 329
               +AS S WLN      ++ L         ITP                 G+ P    
Sbjct: 350 LSKFEASFSPWLNQINEN-IAALNERTPGVGVITP-----------------GDRP---I 409

Query: 330 VGMYCRQGVTSYKDRDSASSF--KGIPNTTSKYREDKTVNWHSTPFETRLERALN 381
           +G+   Q + + +   S   +   GIPN+T+KY+ED+ V+WH+TPFE RLE+AL+
Sbjct: 410 IGLVAAQWIENEQTEISPKMWDGNGIPNSTTKYKEDQKVSWHATPFEVRLEKALS 440

[Close]

BLAST of ClCG06G001490 vs. ExPASy TrEMBL
Match: A0A0A0KF36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088090 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 1.1e-143
Identity = 292/380 (76.84%), Postives = 313/380 (82.37%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK+SKRLKNHH S      + IQRNAI K  QSSVHTL  DSN+ +   V
Sbjct: 1   MGCFFACFGSSKNSKRLKNHHPS------TVIQRNAIAKTHQSSVHTLLDDSNNTLFHPV 60

Query: 73  EAGMM--WAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLS 132
           EAG     AYDHRNR  G EV SVK HEDEHIVLPQ+DA SVHGKKQG  EEEDS E LS
Sbjct: 61  EAGNKNNEAYDHRNRIDGLEVASVKSHEDEHIVLPQQDAVSVHGKKQGQKEEEDSEEKLS 120

Query: 133 KPESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD--DEDDVSDSHLASDENGEFGMVESL 192
           K ESSSEDFVVPLN NFKSSCP IHRY NCKDSD  DED+V D+HL SDEN E G+VES+
Sbjct: 121 KSESSSEDFVVPLNANFKSSCPRIHRYGNCKDSDDEDEDEVFDTHLDSDENDELGIVESM 180

Query: 193 QEDSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVE 252
           +EDSSV ESSM+VCRLNPTNVRHRTAYV SVLNPVENLSQWNAVKSKKEFP  LQKEN +
Sbjct: 181 KEDSSVDESSMDVCRLNPTNVRHRTAYVSSVLNPVENLSQWNAVKSKKEFPPKLQKENAK 240

Query: 253 LEQESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTL 312
           LEQESSV+ F Y SS+PS EPCVDASLSNWL SS+ATPV K+T TMALEAT+TP+KSGTL
Sbjct: 241 LEQESSVDGFPY-SSEPSGEPCVDASLSNWLPSSQATPV-KITPTMALEATMTPLKSGTL 300

Query: 313 QGSSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHS 372
           QGSS +K SGH +M EVGT GMY RQGV S+KD DSASSFKGIPNTTSKYREDKTV WHS
Sbjct: 301 QGSSSLKGSGHSKMSEVGTAGMYHRQGV-SHKDCDSASSFKGIPNTTSKYREDKTVKWHS 360

Query: 373 TPFETRLERALNSRVRGVVA 389
           TPFETRLERALNS  RGV A
Sbjct: 361 TPFETRLERALNS--RGVAA 369

[Close]

BLAST of ClCG06G001490 vs. ExPASy TrEMBL
Match: A0A5D3DLV6 (DNA ligase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001640 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.5e-143
Identity = 290/378 (76.72%), Postives = 309/378 (81.75%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK+SKRLKNH      HH + IQRNAI K  QSSVHTL  DSN+     V
Sbjct: 1   MGCFFACFGSSKNSKRLKNH------HHSTIIQRNAIAKTHQSSVHTLLDDSNNTFFHPV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKP 132
           E G        NR  G EV SVK HEDEHIVLPQ+D  SVHGKKQG  EEEDS E LSK 
Sbjct: 61  EVG--------NRIDGLEVASVKHHEDEHIVLPQQDVVSVHGKKQGQKEEEDSEEKLSKS 120

Query: 133 ESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD--DEDDVSDSHLASDENGEFGMVESLQE 192
           ESSSEDFVVPLNPNFKSSCP IHRYRNCKDSD  DED+V D+HL SDEN E G+VES++E
Sbjct: 121 ESSSEDFVVPLNPNFKSSCPRIHRYRNCKDSDNEDEDEVFDTHLGSDENDELGIVESMKE 180

Query: 193 DSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELE 252
           DSS+ ESSM+VCRLNPTNVRHRTAYV SVLNPVENLSQWNAVKSKKEF   LQKENVELE
Sbjct: 181 DSSLDESSMDVCRLNPTNVRHRTAYVYSVLNPVENLSQWNAVKSKKEFSPKLQKENVELE 240

Query: 253 QESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQG 312
           QESSV+ F Y SS+PSREPCVDASLSNWL SS+ATPVSK+T TMALEATITP+KSGTLQG
Sbjct: 241 QESSVDGFPY-SSEPSREPCVDASLSNWLPSSQATPVSKITPTMALEATITPLKSGTLQG 300

Query: 313 SSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 372
           SS +K SG  +M EVGT  MY RQGV S+KDRDSASSFKGIPNTTSKYREDKTVNWHSTP
Sbjct: 301 SSSLKGSGDSKMSEVGTARMYRRQGV-SHKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 360

Query: 373 FETRLERALNSRVRGVVA 389
           FETRLERALNS  RGV A
Sbjct: 361 FETRLERALNS--RGVAA 360

[Close]

BLAST of ClCG06G001490 vs. ExPASy TrEMBL
Match: A0A1S3CCL7 (uncharacterized protein LOC103498917 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498917 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.9e-142
Identity = 288/378 (76.19%), Postives = 308/378 (81.48%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK+SKRLKNHH S      + IQRNAI K  QSSVHTL  DSN+     V
Sbjct: 1   MGCFFACFGSSKNSKRLKNHHPS------TIIQRNAIAKTHQSSVHTLLDDSNNTFFHPV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKP 132
           + G        NR  G EV SVK HEDEHIVLPQ+D  SVHGKKQG  EEEDS E LSK 
Sbjct: 61  KVG--------NRIDGLEVASVKHHEDEHIVLPQQDVVSVHGKKQGQKEEEDSEEKLSKS 120

Query: 133 ESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD--DEDDVSDSHLASDENGEFGMVESLQE 192
           ESSSEDFVVPLNPNFKSSCP IHRYRNCKDSD  DED+V D+HL SDEN E G+VES++E
Sbjct: 121 ESSSEDFVVPLNPNFKSSCPRIHRYRNCKDSDDEDEDEVFDTHLGSDENDELGIVESMKE 180

Query: 193 DSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELE 252
           DSS+ ESSM+VCRLNPTNVRHRTAYV SVLNPVENLSQWNAVKSKKEF   LQKENVELE
Sbjct: 181 DSSLDESSMDVCRLNPTNVRHRTAYVYSVLNPVENLSQWNAVKSKKEFSPKLQKENVELE 240

Query: 253 QESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQG 312
           QESSV+ F Y SS+PSREPCVDASLSNWL SS+ATPVSK+T TMALEATITP+KSG LQG
Sbjct: 241 QESSVDGFPY-SSEPSREPCVDASLSNWLPSSQATPVSKITPTMALEATITPLKSGNLQG 300

Query: 313 SSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 372
           SS +K SG  +M EVGT  MY RQGV S+KDRDSASSFKGIPNTTSKYREDKTVNWHSTP
Sbjct: 301 SSSLKGSGDSKMSEVGTARMYRRQGV-SHKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 360

Query: 373 FETRLERALNSRVRGVVA 389
           FETRLERALNS  RGV A
Sbjct: 361 FETRLERALNS--RGVAA 360

[Close]

BLAST of ClCG06G001490 vs. ExPASy TrEMBL
Match: A0A1S3CAX7 (uncharacterized protein LOC103498917 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498917 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.5e-140
Identity = 286/378 (75.66%), Postives = 307/378 (81.22%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK+SKRLKNHH S      + IQRNAI K  QSSVHTL  DSN+     V
Sbjct: 1   MGCFFACFGSSKNSKRLKNHHPS------TIIQRNAIAKTHQSSVHTLLDDSNNTFFHPV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHEDEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKP 132
           + G+           G EV SVK HEDEHIVLPQ+D  SVHGKKQG  EEEDS E LSK 
Sbjct: 61  KVGI----------DGLEVASVKHHEDEHIVLPQQDVVSVHGKKQGQKEEEDSEEKLSKS 120

Query: 133 ESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD--DEDDVSDSHLASDENGEFGMVESLQE 192
           ESSSEDFVVPLNPNFKSSCP IHRYRNCKDSD  DED+V D+HL SDEN E G+VES++E
Sbjct: 121 ESSSEDFVVPLNPNFKSSCPRIHRYRNCKDSDDEDEDEVFDTHLGSDENDELGIVESMKE 180

Query: 193 DSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELE 252
           DSS+ ESSM+VCRLNPTNVRHRTAYV SVLNPVENLSQWNAVKSKKEF   LQKENVELE
Sbjct: 181 DSSLDESSMDVCRLNPTNVRHRTAYVYSVLNPVENLSQWNAVKSKKEFSPKLQKENVELE 240

Query: 253 QESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQG 312
           QESSV+ F Y SS+PSREPCVDASLSNWL SS+ATPVSK+T TMALEATITP+KSG LQG
Sbjct: 241 QESSVDGFPY-SSEPSREPCVDASLSNWLPSSQATPVSKITPTMALEATITPLKSGNLQG 300

Query: 313 SSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 372
           SS +K SG  +M EVGT  MY RQGV S+KDRDSASSFKGIPNTTSKYREDKTVNWHSTP
Sbjct: 301 SSSLKGSGDSKMSEVGTARMYRRQGV-SHKDRDSASSFKGIPNTTSKYREDKTVNWHSTP 358

Query: 373 FETRLERALNSRVRGVVA 389
           FETRLERALNS  RGV A
Sbjct: 361 FETRLERALNS--RGVAA 358

[Close]

BLAST of ClCG06G001490 vs. ExPASy TrEMBL
Match: A0A6J1GNU2 (uncharacterized protein LOC111456104 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456104 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 4.1e-138
Identity = 281/374 (75.13%), Postives = 302/374 (80.75%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCFFA FGSSK  KRLKN+ KS HT+H+STIQRN IPKP QSS+HTLP  SN K +  V
Sbjct: 1   MGCFFACFGSSKDPKRLKNYRKSRHTNHRSTIQRNEIPKPGQSSLHTLPVYSNKKSLHPV 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHED----EHIVLPQEDAASVHGKKQGLNEEEDSVET 132
           EAG   +    N     EVTSVKPHE     EH+VLPQED AS+HG  Q L  EEDSVE 
Sbjct: 61  EAGRDGSL---NISTTEEVTSVKPHEQEHEHEHVVLPQEDVASIHGMNQDL--EEDSVEK 120

Query: 133 LSKPESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSDDEDDVSDSHLASDENGEFGMVESL 192
            SKPESSSEDFVVPL+PNFKSS PP+HRYRNCKDSDDEDDV +SHL  DEN EFGMVES+
Sbjct: 121 SSKPESSSEDFVVPLDPNFKSSFPPVHRYRNCKDSDDEDDVFESHLGRDENDEFGMVESM 180

Query: 193 QEDSSVAESSMNVCRLNPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVE 252
           +E SSVA SSMNV RLNPTNVRHRTAYVC VL PVEN+SQWNAVKSK   PST QKEN+E
Sbjct: 181 KESSSVAHSSMNVNRLNPTNVRHRTAYVCPVLKPVENISQWNAVKSKSALPSTPQKENLE 240

Query: 253 LEQESSVEEFSYSSSKPSREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTL 312
           LEQES+ EEF Y SSK S+E CVDASLSNWL SSEATP SK+TATMALEAT+TPVKS TL
Sbjct: 241 LEQESTGEEFPY-SSKASQELCVDASLSNWLASSEATPASKITATMALEATVTPVKSSTL 300

Query: 313 QGSSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNTTSKYREDKTVNWHS 372
           QGSS  + S H E+P V TVG Y RQG  S KDRDSASSFKGIPNTTSKYREDKTVNWHS
Sbjct: 301 QGSS-SQSSSHRELPVVRTVGTYRRQG-ASDKDRDSASSFKGIPNTTSKYREDKTVNWHS 360

Query: 373 TPFETRLERALNSR 383
           TPFETRLERALNSR
Sbjct: 361 TPFETRLERALNSR 366

[Close]

BLAST of ClCG06G001490 vs. TAIR 10
Match: AT1G04030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-29
Identity = 139/447 (31.10%), Postives = 194/447 (43.40%), Query Frame = 0


Query: 13  MGCFFALFGSSKHSKRLKNHHKSPHTHHQSTIQRNAIPKPAQSSVHTLPHDSNSKIMQLV 72
           MGCF   FG  K+ +R +         ++ +++  A P      VH +     + ++ + 
Sbjct: 1   MGCFSGCFGGRKNRRRQRRRDSDEARDNKLSVE-TAEPHHLNDRVHIVEEIPKASVIPIT 60

Query: 73  EAGMMWAYDHRNRCYGSEVTSVKPHED------EHIVLPQEDAASVHGKKQGLNEEEDSV 132
           E       +   +C  S ++  +   D      EH+V   E++  +  +K   NEE +S 
Sbjct: 61  EI----CDEAEEKCSPSTISRKRVTFDSKVKTYEHVV--SEESVELSEEK---NEEVES- 120

Query: 133 ETLSKPESSSEDFVVPLNPNFKSSCPPIHRYRNCKDSD-----DEDDVSDSHLASDEN-- 192
           E  S   S ++D ++ +  N   S P  HRY+NC++SD     DE D SDS L  DE   
Sbjct: 121 EKRSLKSSKTDDQIIEVASNSSGSYPENHRYKNCRESDDDIEEDEFDCSDSDLDEDEEYY 180

Query: 193 GEFGMVES----------LQEDSSVAESSMNVCRLNPTNVRHRTAY-VCSVLNPVENLSQ 252
            + G  E            Q+     E   +  R +   VR    Y    VLNPVENL+Q
Sbjct: 181 SDVGFSEDSLHNPTKEVYTQDIGDKTEEIDSKLRRSNETVRDGNHYDGQGVLNPVENLTQ 240

Query: 253 WNAVKSK---KEFPSTLQKENVELEQESSVEEFSYS----------SSKP---------- 312
           W + KSK   K+  S  +  N   +QE   +  S+           S KP          
Sbjct: 241 WKSAKSKGRTKQKQSQKENSNFIADQEEKRDSSSFGTDPQIDDITLSVKPKCRIEPKKLR 300

Query: 313 SREPCVDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQGSSPMKRSGH------ 372
           ++E  VDASLS WL++SE    S      A   T+TP K  +    S   R  H      
Sbjct: 301 NQELAVDASLSTWLSTSE----SGSECNSASMYTLTPEKLKSTSCYSKPLRINHDDRPVL 360

Query: 373 -------------------------GEMPEVGTVGMYCRQGVTSYKDRDSASSFKGIPNT 382
                                     E P +GTVG Y      +  D  SASSFKGIPNT
Sbjct: 361 CALTLEDIKQFSATSTPRKSPSKSPDETPIIGTVGGYWGNRSKAI-DCGSASSFKGIPNT 420

[Close]

BLAST of ClCG06G001490 vs. TAIR 10
Match: AT5G44040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 9.0e-13
Identity = 88/304 (28.95%), Postives = 134/304 (44.08%), Query Frame = 0


Query: 92  TSVKPHE----DEHIVLPQEDAASVHGKKQGLNEEEDSVETLSKPESSSEDFVVPLNPNF 151
           T+VK +E    DE + L +E    V  ++   + E   V +                 N 
Sbjct: 115 TNVKTYEHIAVDESVELFEEKKEEVKSRQARCSSEGSDVTS-----------------NS 174

Query: 152 KSSCPPIHRYRNCKDSDDED----DVSDSHLASDENGEFGMVES--LQEDS--------- 211
             S P  HRY+NC++SDDE+    D  DS L   ++ + G+++     +D+         
Sbjct: 175 SGSYPSNHRYQNCRESDDEEEDVTDCDDSDLEDTDDDDCGLLDDDYYNDDNYEDKLHNWD 234

Query: 212 ------SVAESSMNVCRL---NPTNVRHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQ 271
                  +A++ M++ R+      +VR R+ YV +VLNP+ENLSQW AVK+K    +  Q
Sbjct: 235 KVVYTEEIADNVMDIERVEEKGSVSVRDRSGYVNAVLNPIENLSQWKAVKAKGRTTTQTQ 294

Query: 272 --KENV---ELEQESSVEEFS--YSSSKPSR---------EPCVDASLSNWLNSSEATP- 331
             KENV       ES V++ S  +S ++ SR         E  VDASLS WL++S+ T  
Sbjct: 295 PRKENVIIASFSLESQVDDLSSTFSLNRKSRDETEKQRTQEIAVDASLSTWLSTSQTTTS 354

[Close]

BLAST of ClCG06G001490 vs. TAIR 10
Match: AT1G06660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-08
Identity = 55/175 (31.43%), Postives = 81/175 (46.29%), Query Frame = 0


Query: 210 RHRTAYVCSVLNPVENLSQWNAVKSKKEFPSTLQKENVELEQESSVEEFSYSSSKPSREP 269
           R R+ +V SV N +EN S +   K   E      +E +E E  SS E +     + S E 
Sbjct: 290 RIRSQFVHSVSNIMENASLYKVYKDSHE--GLDYEEQIEAETPSS-ETYGEKVEESSDEK 349

Query: 270 C--VDASLSNWLNSSEATPVSKLTATMALEATITPVKSGTLQGSSPMKRSGHGEMPEVGT 329
               +AS S WLN      ++ L         ITP                 G+ P    
Sbjct: 350 LSKFEASFSPWLNQINEN-IAALNERTPGVGVITP-----------------GDRP---I 409

Query: 330 VGMYCRQGVTSYKDRDSASSF--KGIPNTTSKYREDKTVNWHSTPFETRLERALN 381
           +G+   Q + + +   S   +   GIPN+T+KY+ED+ V+WH+TPFE RLE+AL+
Sbjct: 410 IGLVAAQWIENEQTEISPKMWDGNGIPNSTTKYKEDQKVSWHATPFEVRLEKALS 440

[Close]

BLAST of ClCG06G001490 vs. TAIR 10
Match: AT2G30820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 311 SSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSAS----SFKGIPNTTSKYREDKTVNW 370
           SSP+     G+ P +G V  +  +     K+    S       GIPN+T+KY+ED+ V+W
Sbjct: 319 SSPLS-INPGDRPIIGMVAAHWNE-----KEHSQISPKWWDGNGIPNSTNKYKEDQKVSW 378

Query: 371 HSTPFETRLERALN 381
           H+TPFE RLE+AL+
Sbjct: 379 HATPFEERLEKALS 386

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BLAST of ClCG06G001490 vs. TAIR 10
Match: AT2G30820.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 311 SSPMKRSGHGEMPEVGTVGMYCRQGVTSYKDRDSAS----SFKGIPNTTSKYREDKTVNW 370
           SSP+     G+ P +G V  +  +     K+    S       GIPN+T+KY+ED+ V+W
Sbjct: 319 SSPLS-INPGDRPIIGMVAAHWNE-----KEHSQISPKWWDGNGIPNSTNKYKEDQKVSW 378

Query: 371 HSTPFETRLERALN 381
           H+TPFE RLE+AL+
Sbjct: 379 HATPFEERLEKALS 386

The following BLAST results are available for this feature:

BLAST of ClCG06G001490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874798.1	1.0e-159	82.59	protein JASON-like isoform X1 [Benincasa hispida] >XP_038874799.1 protein JASON-...	[more]
XP_038874800.1	2.5e-158	82.06	protein JASON-like isoform X2 [Benincasa hispida]	[more]
XP_011656777.1	2.3e-143	76.84	uncharacterized protein LOC101205962 isoform X1 [Cucumis sativus]	[more]
KAA0039885.1	5.1e-143	76.72	DNA ligase 1 [Cucumis melo var. makuwa] >TYK24617.1 DNA ligase 1 [Cucumis melo v...	[more]
XP_008459951.1	1.6e-141	76.19	PREDICTED: uncharacterized protein LOC103498917 isoform X1 [Cucumis melo]	[more]

BLAST of ClCG06G001490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IDQ5	7.2e-07	31.43	Protein JASON OS=Arabidopsis thaliana OX=3702 GN=JASON PE=2 SV=1	[more]

BLAST of ClCG06G001490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF36	1.1e-143	76.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088090 PE=4 SV=1	[more]
A0A5D3DLV6	2.5e-143	76.72	DNA ligase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001640 ...	[more]
A0A1S3CCL7	7.9e-142	76.19	uncharacterized protein LOC103498917 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CAX7	1.5e-140	75.66	uncharacterized protein LOC103498917 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GNU2	4.1e-138	75.13	uncharacterized protein LOC111456104 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of ClCG06G001490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04030.1	4.0e-29	31.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G44040.1	9.0e-13	28.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G06660.1	5.1e-08	31.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G30820.1	1.3e-06	40.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G30820.2	1.3e-06	40.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..138
None	No IPR available	PANTHER	PTHR33318:SF4	RRNA BIOGENESIS PROTEIN RRP36	coord: 13..382
IPR039300	Protein JASON	PANTHER	PTHR33318	ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT	coord: 13..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G001490.2	ClCG06G001490.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007142	male meiosis II
molecular_function	GO:0016874	ligase activity