ClCG05G026880 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAAAACAAAAAACAAAAAACCGCCGGTCGCCGGATGGCACAATGTTATTCGAATTCCTTCATACAAAGACGTTCCCGGCGCCGACATCGGAGGGGGAAAAAGCGAGGAGAAGAAGCGCCGCCATGATTCCAACCGGAAAGAAGAGAAACACAAGCGGTGGCGGAGGCAGCGGCGGAAGAACCAAGGGCAGAACGACCATGGAAACCGCAACGGCGGCGAGGACGAAAACGGACACTAAGTTGAAGCAACGTACCATAGCAATTTTCTGGCAGCCGGAGATTGGATCATGTCCTTCAGCGGCGGGAATGCGTGTGAAAAGAATCCGGTGA ATGGAAGAAAAACAAAAAACAAAAAACCGCCGGTCGCCGGATGGCACAATGTTATTCGAATTCCTTCATACAAAGACGTTCCCGGCGCCGACATCGGAGGGGGAAAAAGCGAGGAGAAGAAGCGCCGCCATGATTCCAACCGGAAAGAAGAGAAACACAAGCGGTGGCGGAGGCAGCGGCGGAAGAACCAAGGGCAGAACGACCATGGAAACCGCAACGGCGGCGAGGACGAAAACGGACACTAAGTTGAAGCAACGTACCATAGCAATTTTCTGGCAGCCGGAGATTGGATCATGTCCTTCAGCGGCGGGAATGCGTGTGAAAAGAATCCGGTGA ATGGAAGAAAAACAAAAAACAAAAAACCGCCGGTCGCCGGATGGCACAATGTTATTCGAATTCCTTCATACAAAGACGTTCCCGGCGCCGACATCGGAGGGGGAAAAAGCGAGGAGAAGAAGCGCCGCCATGATTCCAACCGGAAAGAAGAGAAACACAAGCGGTGGCGGAGGCAGCGGCGGAAGAACCAAGGGCAGAACGACCATGGAAACCGCAACGGCGGCGAGGACGAAAACGGACACTAAGTTGAAGCAACGTACCATAGCAATTTTCTGGCAGCCGGAGATTGGATCATGTCCTTCAGCGGCGGGAATGCGTGTGAAAAGAATCCGGTGA MEEKQKTKNRRSPDGTMLFEFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAIFWQPEIGSCPSAAGMRVKRIR Homology
BLAST of ClCG05G026880 vs. NCBI nr
Match: KAG6573795.1 (hypothetical protein SDJN03_27682, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22 Identity = 62/79 (78.48%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of ClCG05G026880 vs. NCBI nr
Match: KAE8648868.1 (hypothetical protein Csa_008159, partial [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20 Identity = 60/74 (81.08%), Postives = 62/74 (83.78%), Query Frame = 0
BLAST of ClCG05G026880 vs. NCBI nr
Match: EEF49536.1 (glutamate receptor 2 plant, putative [Ricinus communis]) HSP 1 Score: 61.2 bits (147), Expect = 6.4e-06 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of ClCG05G026880 vs. NCBI nr
Match: KAG5066285.1 (hypothetical protein JHK86_010016 [Glycine max]) HSP 1 Score: 61.2 bits (147), Expect = 6.4e-06 Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of ClCG05G026880 vs. NCBI nr
Match: PON98760.1 (hypothetical protein TorRG33x02_053750 [Trema orientale]) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-05 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of ClCG05G026880 vs. ExPASy TrEMBL
Match: A0A0A0KWY2 (Glutamate receptor 2 plant OS=Cucumis sativus OX=3659 GN=Csa_5G623890 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20 Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0
BLAST of ClCG05G026880 vs. ExPASy TrEMBL
Match: B9RG81 (Glutamate receptor 2 plant, putative OS=Ricinus communis OX=3988 GN=RCOM_1452030 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.1e-06 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of ClCG05G026880 vs. ExPASy TrEMBL
Match: A0A2P5FLV3 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_053750 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of ClCG05G026880 vs. ExPASy TrEMBL
Match: A0A540KIX5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_040301 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 7.6e-05 Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of ClCG05G026880 vs. ExPASy TrEMBL
Match: A0A498JFA5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_015873 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.8e-04 Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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