ClCG05G024350 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGATTCTTCTCGATCTCCATCCTCTCTCTTCCATGATTCGTACCACTTCCACAGATTTTTCTTTGTTTTTTCTGTAAACCCTAACTCGAATCCTTTTCATTTCCCCCTTCCTTCGTTGATTTTGGTGTTGTTTGTGTCATTTTCTTTTCCTTCTTGTAGAAAGGCCAGTGTAGGAAGGTTATCCCTTATTCTCCTTTCCCATCATAGGAATTGGATTCGGGATTCCCTTCCTGCTCTTTCTTAAACTGCCGGAGAACTGTACGGGAGCTGAGATTTGGGTTTTTGGTTCCTAATGCAATTCCAGCTGCTTTTGGGGTTTAGTATTTGATCGGTTCTGGGTTCTTTTCCAAGATGGGTATTGTAATCTCTGATCAAATGTTGGGTACTTTTGTACCCATTGTGGTTTATTGGCTATATTCTGGGTTTTATATTCTTCTTGGCTCATTTGAGAACTATCGGTTGCACTCTAAGAAAGATGAGCAGGAAAAGAACCTAGTGTCCAAAAGCACCGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTATGCATTGCATAAAGTCCATTCAAGTTCATTTAATTTCTATTTGTATTTGTTTTTCATCATACCTTGTAACTTTGTCAAGACCTTTGTATAAAGTCAAGGATCAAATATGAATAGGGTATTAATTAATAGTTGAAAGAGGTGGCACTGAATCATATGGGAACTGTAACAATCACTTGATGCGAAATTCACCTCTTCCCGGTCCACTTGCTTGTTGTTCTCATGGGTTTGTGGACACTAGATATCAAAGCATTGAGACTGGACTATGTTTGTTGAGAAGTAATTGTAGTAGTGATTGGCACTGCGAACTTTATTGCCGGTCTGTGATTTGATTAGTTCTTGTTACATTGTACGAGCTATATTACCCTGCATCAGTTGTGGAGGGTTGGACCTGTGTACTTCTTAGTCTTGCAGACCAAGATTGGTCGATATATTATTCTCTGAAAACTCTTTTAGTTAGTTTTGAATCATTTATTTCACCTGGTTAGGTCACTTTCCGTGAAAATATTTCATCCATGATTCTTGAGCTACTGTACTTCAAAATTCTTACCTCCCCACCAAAAGAAAGAGAGAATACAAGAAATAGATAAAGTAGCATTCCAAAATCTGATGCTGCATTTTAATTTTGATTAGTTAGTCATATGAATAAGCATTTTCTATTGAAAGAGCTTGTCTGACCAGTGGTTTCTTTTTGTGTAATTTTTCTGTGGTGTGTGCGTCTCAAAGCAAACCTCAATCCTTGAGCTGTCTCATGATGGATGCCACCAAATTACTACTTACAACTAGCGGTTGATGGTGCATAAGTTTTAACCTCTTTCCCCCATATGTCTTGGAATTTAGGTGGTTGAGGGAAAGGAAGGAAGCTAGCCAAAAGTAGAAGAAATAGCTGAAAATTTTTATCCCGTATCAATATATATCATTTTAGCAGAAACACTGTTAATCTAGATTGATAGACTTGTGATCTTTTGTGCACCTTTTACTCAGCTGTGCTTCAATTCTAACCTTCCACATCGAGAGCATCTTTTTTATGGGTTCTGCTGTCCTTGAATAGTTGAATATTAGTTTCTAAAGTGAAGCATTTTGGTCCACATTTCTTAAATACACGTTTCTCTCTGGTATAACCCACCAGAACGCTCAGATTGACCTACTCTTCAGTCTTTTACAGTGTCTGGTTTCTTTCACATATATTTGTTTTCTCACTGTTCAAGTACTGGCTGTAAATGTCCTGTAGCCATTATTCAATATGATTAAGAAACAGAAATTGGTTTCTTGTGTTGAAGTCAGTTTTTGTGAGGTGGAAAACCTACGCATTCCTGAAAAATGAAGGGATTGAAGAACTTACTTGTAAGGGGCCAAAATTGCAATGTTGCATTAGTTAAGCATTAGTCTGTAGATCCTGCAATTAATTTCTGATATTCTGGGTCTAATCATTTCTCTTTGCATACTGAATATTGCTTGTTCCATTCGTTTACTGGTCTGTCCTGCATCTAATGTAATGGACGTGTAATTTATTCACTAAAATTTACGGAGTCATAATGTGGCTAATGTTTGGGTGACTCTTTATTTTTCACGTTGTATTTTCTATTGCTGAGTGGATTTGACATGGGAAAGTTGATTTGTTCATCGCCTGTTGCTGACAATTGCTTTGTTTTAACTTTTCATGTAGGTGACTGAAAATGATGGGGAGGTTGCTACAGTTTCAAAATCTTGGCTAACAATCGTAGTTCAGTTTATTGTAGCGATGCTGGTGTTGGACACTTGGCAATACTTTATTCACAGATACATGCATCAGAACAAGTTTCTATACAAGCACGTCCATTCCCAGCATCACCGGTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCATTGGAAGGTCTTCTCCTTGACACAATCGGTGGGGCTTTATCTTTTCTCGTTTCTGGGATGTCGCCTCGGGTTGCCATCTTTTTCTTTTCCTTTGCAACCATCAAAACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCATGTGTTCTTCAGAAACAATTCTGCGTATCATGATGTCCATCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTATGTGGGATAGAATATTTGGCACCTACATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAGGCGCGAGTTAAGGAAGATTAGTTGTTCCATAGCAATCACATATTATTTGCCCCCAGTGTTAATTTTTTTCTCCCTGTTAGCCAGCCACCATACTGCTAAATTTGTATCATACACCTATTCTTGTGTCTTACACTTTTGTTACTATTATTTTCCTCGAAGTTTCATAGCTGAATCATGTTGTGATTTGAACCCTTTTCTTTTTTCTTGTACCTACTCCTTGTGAACAGAGAACCCTTTGATTTTTTTTCCTTCTTTTTTTCCTTTTTACTTTCGGATTGGGGTAACCGGTACTTAATGACATTCTGAAG GTTTGATTCTTCTCGATCTCCATCCTCTCTCTTCCATGATTCGTACCACTTCCACAGATTTTTCTTTGTTTTTTCTGTAAACCCTAACTCGAATCCTTTTCATTTCCCCCTTCCTTCGTTGATTTTGGTGTTGTTTGTGTCATTTTCTTTTCCTTCTTGTAGAAAGGCCAGTGTAGGAAGGTTATCCCTTATTCTCCTTTCCCATCATAGGAATTGGATTCGGGATTCCCTTCCTGCTCTTTCTTAAACTGCCGGAGAACTGTACGGGAGCTGAGATTTGGGTTTTTGGTTCCTAATGCAATTCCAGCTGCTTTTGGGGTTTAGTATTTGATCGGTTCTGGGTTCTTTTCCAAGATGGGTATTGTAATCTCTGATCAAATGTTGGGTACTTTTGTACCCATTGTGGTTTATTGGCTATATTCTGGGTTTTATATTCTTCTTGGCTCATTTGAGAACTATCGGTTGCACTCTAAGAAAGATGAGCAGGAAAAGAACCTAGTGTCCAAAAGCACCGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTGACTGAAAATGATGGGGAGGTTGCTACAGTTTCAAAATCTTGGCTAACAATCGTAGTTCAGTTTATTGTAGCGATGCTGGTGTTGGACACTTGGCAATACTTTATTCACAGATACATGCATCAGAACAAGTTTCTATACAAGCACGTCCATTCCCAGCATCACCGGTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCATTGGAAGGTCTTCTCCTTGACACAATCGGTGGGGCTTTATCTTTTCTCGTTTCTGGGATGTCGCCTCGGGTTGCCATCTTTTTCTTTTCCTTTGCAACCATCAAAACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCATGTGTTCTTCAGAAACAATTCTGCGTATCATGATGTCCATCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTATGTGGGATAGAATATTTGGCACCTACATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAGGCGCGAGTTAAGGAAGATTAGTTGTTCCATAGCAATCACATATTATTTGCCCCCAGTGTTAATTTTTTTCTCCCTGTTAGCCAGCCACCATACTGCTAAATTTGTATCATACACCTATTCTTGTGTCTTACACTTTTGTTACTATTATTTTCCTCGAAGTTTCATAGCTGAATCATGTTGTGATTTGAACCCTTTTCTTTTTTCTTGTACCTACTCCTTGTGAACAGAGAACCCTTTGATTTTTTTTCCTTCTTTTTTTCCTTTTTACTTTCGGATTGGGGTAACCGGTACTTAATGACATTCTGAAG ATGGGTATTGTAATCTCTGATCAAATGTTGGGTACTTTTGTACCCATTGTGGTTTATTGGCTATATTCTGGGTTTTATATTCTTCTTGGCTCATTTGAGAACTATCGGTTGCACTCTAAGAAAGATGAGCAGGAAAAGAACCTAGTGTCCAAAAGCACCGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTGACTGAAAATGATGGGGAGGTTGCTACAGTTTCAAAATCTTGGCTAACAATCGTAGTTCAGTTTATTGTAGCGATGCTGGTGTTGGACACTTGGCAATACTTTATTCACAGATACATGCATCAGAACAAGTTTCTATACAAGCACGTCCATTCCCAGCATCACCGGTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCATTGGAAGGTCTTCTCCTTGACACAATCGGTGGGGCTTTATCTTTTCTCGTTTCTGGGATGTCGCCTCGGGTTGCCATCTTTTTCTTTTCCTTTGCAACCATCAAAACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCATGTGTTCTTCAGAAACAATTCTGCGTATCATGATGTCCATCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTATGTGGGATAGAATATTTGGCACCTACATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAGGCGCGAGTTAAGGAAGATTAG MGIVISDQMLGTFVPIVVYWLYSGFYILLGSFENYRLHSKKDEQEKNLVSKSTVVRGVFLQQIIQAIVAILLFKVTENDGEVATVSKSWLTIVVQFIVAMLVLDTWQYFIHRYMHQNKFLYKHVHSQHHRLVVPYAFGALYNHPLEGLLLDTIGGALSFLVSGMSPRVAIFFFSFATIKTVDDHCGLWLPGNLFHVFFRNNSAYHDVHHQLYGSKYNFSQPFFVMWDRIFGTYMPYSLEKRAGGGFEARVKED Homology
BLAST of ClCG05G024350 vs. NCBI nr
Match: XP_038892349.1 (sphinganine C4-monooxygenase 2 [Benincasa hispida]) HSP 1 Score: 495.7 bits (1275), Expect = 2.3e-136 Identity = 244/253 (96.44%), Postives = 248/253 (98.02%), Query Frame = 0
BLAST of ClCG05G024350 vs. NCBI nr
Match: XP_004135460.1 (sphinganine C4-monooxygenase 2 [Cucumis sativus] >KGN51908.1 hypothetical protein Csa_008088 [Cucumis sativus]) HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136 Identity = 246/253 (97.23%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of ClCG05G024350 vs. NCBI nr
Match: XP_008446343.1 (PREDICTED: sphinganine C4-monooxygenase 2 [Cucumis melo] >KAA0034409.1 sphinganine C4-monooxygenase 2 [Cucumis melo var. makuwa] >TYK17723.1 sphinganine C4-monooxygenase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 493.8 bits (1270), Expect = 8.8e-136 Identity = 245/253 (96.84%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of ClCG05G024350 vs. NCBI nr
Match: XP_022987574.1 (sphinganine C4-monooxygenase 2-like [Cucurbita maxima] >KAG7032210.1 Sphinganine C4-monooxygenase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 488.0 bits (1255), Expect = 4.8e-134 Identity = 239/253 (94.47%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of ClCG05G024350 vs. NCBI nr
Match: KAG6601427.1 (Sphinganine C4-monooxygenase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 487.3 bits (1253), Expect = 8.2e-134 Identity = 238/253 (94.07%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy Swiss-Prot
Match: Q9AST3 (Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=SBH2 PE=1 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 4.4e-114 Identity = 196/250 (78.40%), Postives = 220/250 (88.00%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy Swiss-Prot
Match: Q8VYI1 (Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=SBH1 PE=1 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 9.8e-114 Identity = 193/250 (77.20%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy Swiss-Prot
Match: B8B4W4 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. indica OX=39946 GN=GL1-9 PE=3 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 7.8e-95 Identity = 164/252 (65.08%), Postives = 203/252 (80.56%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy Swiss-Prot
Match: Q0D4G3 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. japonica OX=39947 GN=GL1-9 PE=2 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 7.8e-95 Identity = 164/252 (65.08%), Postives = 203/252 (80.56%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy Swiss-Prot
Match: O94298 (Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sur2 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.7e-54 Identity = 107/254 (42.13%), Postives = 149/254 (58.66%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy TrEMBL
Match: A0A0A0KQL6 (Fatty acid hydroxylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605020 PE=3 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136 Identity = 246/253 (97.23%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy TrEMBL
Match: A0A5A7SZ77 (Sphinganine C4-monooxygenase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00520 PE=3 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 4.2e-136 Identity = 245/253 (96.84%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy TrEMBL
Match: A0A1S3BEC5 (sphinganine C4-monooxygenase 2 OS=Cucumis melo OX=3656 GN=LOC103489111 PE=3 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 4.2e-136 Identity = 245/253 (96.84%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy TrEMBL
Match: A0A6J1JJ91 (sphinganine C4-monooxygenase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485096 PE=3 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 2.3e-134 Identity = 239/253 (94.47%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of ClCG05G024350 vs. ExPASy TrEMBL
Match: A0A6J1H222 (sphinganine C4-monooxygenase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458865 PE=3 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 5.2e-134 Identity = 238/253 (94.07%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of ClCG05G024350 vs. TAIR 10
Match: AT1G14290.1 (sphingoid base hydroxylase 2 ) HSP 1 Score: 412.1 bits (1058), Expect = 3.1e-115 Identity = 196/250 (78.40%), Postives = 220/250 (88.00%), Query Frame = 0
BLAST of ClCG05G024350 vs. TAIR 10
Match: AT1G69640.1 (sphingoid base hydroxylase 1 ) HSP 1 Score: 411.0 bits (1055), Expect = 7.0e-115 Identity = 193/250 (77.20%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of ClCG05G024350 vs. TAIR 10
Match: AT2G29390.4 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-12 Identity = 51/155 (32.90%), Postives = 72/155 (46.45%), Query Frame = 0
BLAST of ClCG05G024350 vs. TAIR 10
Match: AT2G29390.5 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-12 Identity = 51/155 (32.90%), Postives = 72/155 (46.45%), Query Frame = 0
BLAST of ClCG05G024350 vs. TAIR 10
Match: AT2G29390.3 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 69.7 bits (169), Expect = 3.8e-12 Identity = 66/239 (27.62%), Postives = 105/239 (43.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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