ClCG05G024140 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATACACACGAAGCTCAGAGTTCTTCTCTTCGTCTCCGACAAACTAGGGTTTTCTTTCCATTCAGACAGCCGGGCACTGGTGGCGACACGCTTTCCCGCAGAATCGTTGCTGCTTATTCTCGCTCTTTTCTGTCCCTAAAAATGTAAGCTTTCTCCGGCTTTTTTGTTTCTTAAAGCATTGCTTAATTTCATACTTTGTTCTGAGGGACTGTTTTGATTACTACCCTAAATTTTAGGCTTTTTTTTTCCCCCCGTCTGTGATTGTTTGTGTGTATTCGTTTCCGAAGTATTGGAAGCTTTCTTTTTATCTTTTCCCGCGACGACCTTGTTGGGGTTTTCTTTTTTCGCCCCCTTCTTTCTGCTTGAATAGTTTTCCTTTTCTAGTGCTTTACTTTTACCTCTGCAAGCACTGTGTGTCAAATTATTATGGATTTTTGTTTATTTCTCCAAATTTCTAGTTGTAGTTGCAATTTTGGTAGTTATCATTTATGATGGTTGTTAAAGATATATTAGTTTCAGGAATTTTGCTAAGTTGGCCTAGGGACCTTTGATTTTGATTATTTGACACTGTTCCGGTCTACCCATTGTTCTTCTCATCTTCCTTTATTTTTTGGCCTCTTTTGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGAGTTGATAGTTGGTTTGCTTTGAATTTAGATTCTTTGCTTTAAATGTATGTTCTTTACCTAATTCAGCTATTTCCAGGACCTCATAAATTCGTCATGAATTCGTTAAATGTGCATATGGGCCTTCTTACTGTTGGCTTGATGTGGTTATGACTTGTTATTGTATGACTGTGTCCTTGAGTTCTAAGGTTATGACGGTTTTTCTGATGGCAGTTATGCTGTGGTTGGCTCATGGACTTTGAAGGAATTTGGGAACCATGATAGAGTCTGTGCTTGTTGTCTGTAACAAAGAATGAATGCATATGTGAAAATTTTGAGTTAACATTCAAGGGTTTTTTTTGCTTACTGGAAATGTGGTTTTTGATTTCCAAATGTTATTGTATTTCATGATGTAGTTTGTAAGAGAAACTTTTCAATTTTAGTGGCATGGTCTCTGGTTAGTGTTTTAAGAGTTGAAAACAAGCAGAGACAGCCTAAGGAAGTTGATAGCTCAATGGGGTCTCTTTGTTGTGTGGCTGCAAGGCCACATGGATCAAATGCAGCTAGCAGAGACTGGTCTCTGGGCCCTCATGAGCCTTTTTGGCATACAAATACGAGCTTTTCACCACCTCCATCAAGATGGGATATCCAATTCCAATCTGAAGGGTTGCCACATGGTTGGCATGATGCTGTACAACTGTATGGTTCATCTACATCATCAAATAGTAAAGAAAGTCGAAGCTGGATACGGGGCAACAATCATCTTTATACTCACAACTCTGCATCTGATGGTTCTGGGTTGTTTTTTAGTAGTCCTTCTGACATTTCACAAGGCCCTCAATGGACACCTCCGGCAATCCAGGAAATCAATATTGATGGTTATGAAACTGCAACCAAAAGGGGTACTCTTACTGTTATTACATCATCCTTTTCTATAGTCATATAATTATTTCTCGTCATTTTGGGTGGATATAGAACTTCATAGGTCGTTGGGTAATCTGCTATTGAATTCACTTTTTTTTTCTTGTGCTATATATTTCTGGGCTCTAAAGCAGAATAATTGTTGCTTTTCTTATTGCAGTTAAATTCTTATCATGGTTTCATCATTCCATGTAAACATTTTCTTAGCATGTTACATATGGATGAGAAATTTTAGTTGCAGATAATTATGGGTTTGTCTGTGTGTGTCATTGTTCCTCTGTCTGTTATTTGAGACAGCTTTATCATTCTATTCAAACAGAGAATTGTGTGGTTGTGCTACCCATGCCTTTGTGAGAGAATTTTAAACGGATAACTATATAATATTCTTTGTGTGCGGAAGAAGGGAATATTATTTGATGTCTTAAGAGTATGGGCAATGTCCTTGGACTTGCACCCTTGAGTCTTATAGCAGCCCCTACCTCCAAAACCAAACATTGAGGCAACGATTGTGAGCAGTCTGCTCCAGTGAATTGATTTGAATTTTTTAATTATCTTTTCCCTCTTATTTGCTTTTTTATTGTTTGCATTAATAAATGTCTTCAGGGGAGAAATGCTGTTTTAAATTAGTGAGTCGTACCCTGCACTTTAGCTATATTCAACTAGTTTATCCCTATGTATTCAAGTCAGTTTAGCATGGAATTGTGGACAAGTACAAATCACTGGTGGGTCCTCTAGCAGCTAGTTTTACCTGTTTAACTTCCCCTGCGTGAAATTATACTTTTAACTAAAAGTTAGTTCTTACCAACAGATATTCCAATGCCATGACAATGTTATGTTAGTTTAAAATCCTAAATATGTTGTAAAAGATTACAAAATGGTGCAGCATAGTTAAGAGTATAGGATACTGTAGAATTCATCAATATTGGAACAGTTTTGTTTTAACGCTGCTATCGTTTTGCATCAACTGAACTGTTTTCTTGTCTTTCTTGCTCCTTAGATCATTCGTTGAGGACATTTTCCTTTTGGCCTGCGGCAGAGGTAGTACTGAGTTTTGTATCATCTCCCTGGTACCAGTATTTACCTAGTACTAGCAAATTATAAGTGGTTTTCATTGAATTTTGCAGGGTACCTCCGAAAATCCGGATACTGGGAGCTCTACTTTCTCACATTCAGACAGTAGTGAAACAGAACCCACCATCAAGTTACGCTCATCCTCTAATTGGAACTTCACGAGCCGTCGTTCTTTCATATCCAAACCTATTCATCCTTTGGCCATTCCTATGCAAACTTCCTCAGGAGAAGCTTTTGAATCCACTAATTTAGGGTTCACAGAGTTTGATTCTCCTACTCCCCAAAGAGACACCCAACGATGGAGCAGTGCAAGTAGCAGCATCGATTTTGCTGATGTGTCTGAGCCCCTTGAATCAGACTTCTACTTTAGATCATCATGTAAATCTGATGGTTTCAGATGTGGGTTATGTGAAAGATTTCTTTCACAGAGATCACCATGGAGTTCACGCCGGATTGTGAGAAGTACTGATATGCCAGTTGCTGGCGTGCTTTCTTGTCGACATGTTTTTCATGCTGAATGCTTGGATCAAACTACTCCAAAGACACGTAAGAGTGACCCGCCATGCCCACTTTGTTTGAAACATGAGGATGACCATTCTCCCGAGCAGCGAGCAAATTCGAGATTGAGGAATGCAAATTCCTTACCGAAACCTAGACCCTCGGCCAGTGATGACGGGCCACCAAGGCCATGGGGTTGTGCTCAGGTAGGAGATTGTGTTGAAGGTGCCTTGCATGCACCTCCACGAAATTCGATGCTTTTTGTAAACCGAAATCGTGTGAAGAACCTTTCTTTTAAGGGAAATCCCAGCAAAGAATTTCCTGGAAAGTTGAGAAAAAGTGGCTCATATTCTTCACGATTGGTGAGTGCAAGACCATTTGATCAAGAATTTGCTGGCTGTTCAAGAACTTCAGCTGGACCCAGTATGAAACGATGATTATGTAGATAACTCAGGAGAAAGAAATTCCAAGAGATTTTCTTCTCAGAATCAGCTTTAGCTTGCCTTGTAATTTTTGCTTTACTCTTTCCAAATTCTTCAGCTAGGGAAATTTTAGCTTTCTCCAGATTATTAGATTTTATCTATTGATGTATAGTTGAGTTGTGGGCAATACATGATGAACATGTATTATTTAATTTTTTTTCATCTTTTCCTTTTTGTGATGGATACTAGCAGATAGCGAACAACATTCTAATTTATTACACATGAAGAATATGTG CATACACACGAAGCTCAGAGTTCTTCTCTTCGTCTCCGACAAACTAGGGTTTTCTTTCCATTCAGACAGCCGGGCACTGGTGGCGACACGCTTTCCCGCAGAATCGTTGCTGCTTATTCTCGCTCTTTTCTGTCCCTAAAAATTTATGCTGTGGTTGGCTCATGGACTTTGAAGGAATTTGGGAACCATGATAGAAGAAACTTTTCAATTTTAGTGGCATGGTCTCTGGTTAGTGTTTTAAGAGTTGAAAACAAGCAGAGACAGCCTAAGGAAGTTGATAGCTCAATGGGGTCTCTTTGTTGTGTGGCTGCAAGGCCACATGGATCAAATGCAGCTAGCAGAGACTGGTCTCTGGGCCCTCATGAGCCTTTTTGGCATACAAATACGAGCTTTTCACCACCTCCATCAAGATGGGATATCCAATTCCAATCTGAAGGGTTGCCACATGGTTGGCATGATGCTGTACAACTGTATGGTTCATCTACATCATCAAATAGTAAAGAAAGTCGAAGCTGGATACGGGGCAACAATCATCTTTATACTCACAACTCTGCATCTGATGGTTCTGGGTTGTTTTTTAGTAGTCCTTCTGACATTTCACAAGGCCCTCAATGGACACCTCCGGCAATCCAGGAAATCAATATTGATGGTTATGAAACTGCAACCAAAAGGGATCATTCGTTGAGGACATTTTCCTTTTGGCCTGCGGCAGAGGGTACCTCCGAAAATCCGGATACTGGGAGCTCTACTTTCTCACATTCAGACAGTAGTGAAACAGAACCCACCATCAAGTTACGCTCATCCTCTAATTGGAACTTCACGAGCCGTCGTTCTTTCATATCCAAACCTATTCATCCTTTGGCCATTCCTATGCAAACTTCCTCAGGAGAAGCTTTTGAATCCACTAATTTAGGGTTCACAGAGTTTGATTCTCCTACTCCCCAAAGAGACACCCAACGATGGAGCAGTGCAAGTAGCAGCATCGATTTTGCTGATGTGTCTGAGCCCCTTGAATCAGACTTCTACTTTAGATCATCATGTAAATCTGATGGTTTCAGATGTGGGTTATGTGAAAGATTTCTTTCACAGAGATCACCATGGAGTTCACGCCGGATTGTGAGAAGTACTGATATGCCAGTTGCTGGCGTGCTTTCTTGTCGACATGTTTTTCATGCTGAATGCTTGGATCAAACTACTCCAAAGACACGTAAGAGTGACCCGCCATGCCCACTTTGTTTGAAACATGAGGATGACCATTCTCCCGAGCAGCGAGCAAATTCGAGATTGAGGAATGCAAATTCCTTACCGAAACCTAGACCCTCGGCCAGTGATGACGGGCCACCAAGGCCATGGGGTTGTGCTCAGGTAGGAGATTGTGTTGAAGGTGCCTTGCATGCACCTCCACGAAATTCGATGCTTTTTGTAAACCGAAATCGTGTGAAGAACCTTTCTTTTAAGGGAAATCCCAGCAAAGAATTTCCTGGAAAGTTGAGAAAAAGTGGCTCATATTCTTCACGATTGGTGAGTGCAAGACCATTTGATCAAGAATTTGCTGGCTGTTCAAGAACTTCAGCTGGACCCAGTATGAAACGATGATTATGTAGATAACTCAGGAGAAAGAAATTCCAAGAGATTTTCTTCTCAGAATCAGCTTTAGCTTGCCTTGTAATTTTTGCTTTACTCTTTCCAAATTCTTCAGCTAGGGAAATTTTAGCTTTCTCCAGATTATTAGATTTTATCTATTGATGTATAGTTGAGTTGTGGGCAATACATGATGAACATGTATTATTTAATTTTTTTTCATCTTTTCCTTTTTGTGATGGATACTAGCAGATAGCGAACAACATTCTAATTTATTACACATGAAGAATATGTG CATACACACGAAGCTCAGAGTTCTTCTCTTCGTCTCCGACAAACTAGGGTTTTCTTTCCATTCAGACAGCCGGGCACTGGTGGCGACACGCTTTCCCGCAGAATCGTTGCTGCTTATTCTCGCTCTTTTCTGTCCCTAAAAATTTATGCTGTGGTTGGCTCATGGACTTTGAAGGAATTTGGGAACCATGATAGAAGAAACTTTTCAATTTTAGTGGCATGGTCTCTGGTTAGTGTTTTAAGAGTTGAAAACAAGCAGAGACAGCCTAAGGAAGTTGATAGCTCAATGGGGTCTCTTTGTTGTGTGGCTGCAAGGCCACATGGATCAAATGCAGCTAGCAGAGACTGGTCTCTGGGCCCTCATGAGCCTTTTTGGCATACAAATACGAGCTTTTCACCACCTCCATCAAGATGGGATATCCAATTCCAATCTGAAGGGTTGCCACATGGTTGGCATGATGCTGTACAACTGTATGGTTCATCTACATCATCAAATAGTAAAGAAAGTCGAAGCTGGATACGGGGCAACAATCATCTTTATACTCACAACTCTGCATCTGATGGTTCTGGGTTGTTTTTTAGTAGTCCTTCTGACATTTCACAAGGCCCTCAATGGACACCTCCGGCAATCCAGGAAATCAATATTGATGGTTATGAAACTGCAACCAAAAGGGATCATTCGTTGAGGACATTTTCCTTTTGGCCTGCGGCAGAGGGTACCTCCGAAAATCCGGATACTGGGAGCTCTACTTTCTCACATTCAGACAGTAGTGAAACAGAACCCACCATCAAGTTACGCTCATCCTCTAATTGGAACTTCACGAGCCGTCGTTCTTTCATATCCAAACCTATTCATCCTTTGGCCATTCCTATGCAAACTTCCTCAGGAGAAGCTTTTGAATCCACTAATTTAGGGTTCACAGAGTTTGATTCTCCTACTCCCCAAAGAGACACCCAACGATGGAGCAGTGCAAGTAGCAGCATCGATTTTGCTGATGTGTCTGAGCCCCTTGAATCAGACTTCTACTTTAGATCATCATGTAAATCTGATGGTTTCAGATGTGGGTTATGTGAAAGATTTCTTTCACAGAGATCACCATGGAGTTCACGCCGGATTGTGAGAAGTACTGATATGCCAGTTGCTGGCGTGCTTTCTTGTCGACATGTTTTTCATGCTGAATGCTTGGATCAAACTACTCCAAAGACACGTAAGAGTGACCCGCCATGCCCACTTTGTTTGAAACATGAGGATGACCATTCTCCCGAGCAGCGAGCAAATTCGAGATTGAGGAATGCAAATTCCTTACCGAAACCTAGACCCTCGGCCAGTGATGACGGGCCACCAAGGCCATGGGGTTGTGCTCAGGTAGGAGATTGTGTTGAAGGTGCCTTGCATGCACCTCCACGAAATTCGATGCTTTTTGTAAACCGAAATCGTGTGAAGAACCTTTCTTTTAAGGGAAATCCCAGCAAAGAATTTCCTGGAAAGTTGAGAAAAAGTGGCTCATATTCTTCACGATTGGTGAGTGCAAGACCATTTGATCAAGAATTTGCTGGCTGTTCAAGAACTTCAGCTGGACCCAGTATGAAACGATGA HTHEAQSSSLRLRQTRVFFPFRQPGTGGDTLSRRIVAAYSRSFLSLKIYAVVGSWTLKEFGNHDRRNFSILVAWSLVSVLRVENKQRQPKEVDSSMGSLCCVAARPHGSNAASRDWSLGPHEPFWHTNTSFSPPPSRWDIQFQSEGLPHGWHDAVQLYGSSTSSNSKESRSWIRGNNHLYTHNSASDGSGLFFSSPSDISQGPQWTPPAIQEINIDGYETATKRDHSLRTFSFWPAAEGTSENPDTGSSTFSHSDSSETEPTIKLRSSSNWNFTSRRSFISKPIHPLAIPMQTSSGEAFESTNLGFTEFDSPTPQRDTQRWSSASSSIDFADVSEPLESDFYFRSSCKSDGFRCGLCERFLSQRSPWSSRRIVRSTDMPVAGVLSCRHVFHAECLDQTTPKTRKSDPPCPLCLKHEDDHSPEQRANSRLRNANSLPKPRPSASDDGPPRPWGCAQVGDCVEGALHAPPRNSMLFVNRNRVKNLSFKGNPSKEFPGKLRKSGSYSSRLVSARPFDQEFAGCSRTSAGPSMKR Homology
BLAST of ClCG05G024140 vs. NCBI nr
Match: XP_038892769.1 (uncharacterized protein LOC120081739 [Benincasa hispida] >XP_038892771.1 uncharacterized protein LOC120081739 [Benincasa hispida]) HSP 1 Score: 856.7 bits (2212), Expect = 1.1e-244 Identity = 412/436 (94.50%), Postives = 424/436 (97.25%), Query Frame = 0
BLAST of ClCG05G024140 vs. NCBI nr
Match: XP_004135450.1 (uncharacterized protein LOC101203618 [Cucumis sativus] >XP_011655687.1 uncharacterized protein LOC101203618 [Cucumis sativus] >XP_031741887.1 uncharacterized protein LOC101203618 [Cucumis sativus] >KGN51934.1 hypothetical protein Csa_009161 [Cucumis sativus]) HSP 1 Score: 851.3 bits (2198), Expect = 4.5e-243 Identity = 411/436 (94.27%), Postives = 420/436 (96.33%), Query Frame = 0
BLAST of ClCG05G024140 vs. NCBI nr
Match: XP_008446375.1 (PREDICTED: uncharacterized protein LOC103489136 [Cucumis melo] >XP_008446376.1 PREDICTED: uncharacterized protein LOC103489136 [Cucumis melo] >XP_008446377.1 PREDICTED: uncharacterized protein LOC103489136 [Cucumis melo] >KAA0034432.1 Methyltransferase-like protein 7B [Cucumis melo var. makuwa] >TYK17702.1 Methyltransferase-like protein 7B [Cucumis melo var. makuwa]) HSP 1 Score: 846.7 bits (2186), Expect = 1.1e-241 Identity = 408/436 (93.58%), Postives = 418/436 (95.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. NCBI nr
Match: XP_022968062.1 (uncharacterized protein LOC111467413 [Cucurbita maxima] >XP_022968064.1 uncharacterized protein LOC111467413 [Cucurbita maxima] >XP_022968065.1 uncharacterized protein LOC111467413 [Cucurbita maxima]) HSP 1 Score: 845.1 bits (2182), Expect = 3.3e-241 Identity = 406/436 (93.12%), Postives = 418/436 (95.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. NCBI nr
Match: XP_022945280.1 (uncharacterized protein LOC111449574 [Cucurbita moschata] >XP_022945281.1 uncharacterized protein LOC111449574 [Cucurbita moschata] >XP_022945282.1 uncharacterized protein LOC111449574 [Cucurbita moschata]) HSP 1 Score: 844.7 bits (2181), Expect = 4.2e-241 Identity = 406/436 (93.12%), Postives = 418/436 (95.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. ExPASy TrEMBL
Match: A0A0A0KSR5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606260 PE=4 SV=1) HSP 1 Score: 851.3 bits (2198), Expect = 2.2e-243 Identity = 411/436 (94.27%), Postives = 420/436 (96.33%), Query Frame = 0
BLAST of ClCG05G024140 vs. ExPASy TrEMBL
Match: A0A1S3BFL3 (uncharacterized protein LOC103489136 OS=Cucumis melo OX=3656 GN=LOC103489136 PE=4 SV=1) HSP 1 Score: 846.7 bits (2186), Expect = 5.4e-242 Identity = 408/436 (93.58%), Postives = 418/436 (95.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. ExPASy TrEMBL
Match: A0A5A7STI4 (Methyltransferase-like protein 7B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00300 PE=4 SV=1) HSP 1 Score: 846.7 bits (2186), Expect = 5.4e-242 Identity = 408/436 (93.58%), Postives = 418/436 (95.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. ExPASy TrEMBL
Match: A0A6J1HW51 (uncharacterized protein LOC111467413 OS=Cucurbita maxima OX=3661 GN=LOC111467413 PE=4 SV=1) HSP 1 Score: 845.1 bits (2182), Expect = 1.6e-241 Identity = 406/436 (93.12%), Postives = 418/436 (95.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. ExPASy TrEMBL
Match: A0A6J1G0E8 (uncharacterized protein LOC111449574 OS=Cucurbita moschata OX=3662 GN=LOC111449574 PE=4 SV=1) HSP 1 Score: 844.7 bits (2181), Expect = 2.1e-241 Identity = 406/436 (93.12%), Postives = 418/436 (95.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. TAIR 10
Match: AT1G14180.1 (RING/U-box superfamily protein ) HSP 1 Score: 286.6 bits (732), Expect = 4.2e-77 Identity = 174/413 (42.13%), Postives = 226/413 (54.72%), Query Frame = 0
BLAST of ClCG05G024140 vs. TAIR 10
Match: AT1G14180.2 (RING/U-box superfamily protein ) HSP 1 Score: 208.8 bits (530), Expect = 1.1e-53 Identity = 111/237 (46.84%), Postives = 149/237 (62.87%), Query Frame = 0
BLAST of ClCG05G024140 vs. TAIR 10
Match: AT5G18260.1 (RING/U-box superfamily protein ) HSP 1 Score: 91.7 bits (226), Expect = 2.0e-18 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of ClCG05G024140 vs. TAIR 10
Match: AT4G39140.1 (RING/U-box superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 1.9e-13 Identity = 101/395 (25.57%), Postives = 144/395 (36.46%), Query Frame = 0
BLAST of ClCG05G024140 vs. TAIR 10
Match: AT4G39140.2 (RING/U-box superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 1.9e-13 Identity = 101/395 (25.57%), Postives = 144/395 (36.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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