ClCG05G023910 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G023910
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	cell division topological specificity factor homolog, chloroplastic
Location	CG_Chr05: 35642127 .. 35643612 (+)
RNA-Seq Expression	ClCG05G023910
Synteny	ClCG05G023910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGCGCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTTCCACTTCTCTATTACTGAACTTCCTTATCTTCATTTTCATCCGAGTCTGTTGCCATTCGTCAAATGCATCTCCATTTCTCCAACAATTGCATGGAATTGACATAGATTTGTGGAATACTTTCTGGAATCTGATTTTGTGGTTAGCCTTTCCATCATTTTTTACTCCTTTAATCGCTTCTCCAGATCTTTAGTAGTTTTATTTGTCGATTTGAAGTCACCAATTCTTGACGCTTTGGCTCCAGGTTTCCCTGATTATCAGGCTTGAATTTCAATAGTTGAAATCGCTTGGACTCTATTTCTTGATAGTTGCAACATCCATGCTACTACTGGTTTGGTTTCTCCCAAGTTGCGTCGTTGGTGTGCCTATAAATTTTTCTCATAGTACTCGAGTAGAAGGTGCTATGCTTCTTATGCGATGTTTATAGATGTTGTTAGGCCTAAAACCTGGCGTAATTCATTTTTGGTTCTGGAGAGAATCCAACACTTTTGCTCAAATTTTACTGAATCTTCTGTATAGCGATTGATATGGAGAAAATTTAGAATGCAGGAGGAACCTTCTCGAAAACTTGCAAAACGGCTTTGTTTAATTTGAGATTCTTGTATTGCACTGCAGGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

mRNA sequence

ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGCGCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

Coding sequence (CDS)

ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGCGCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCTCCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCATACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCTCAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGCGGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGTTGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA

Protein sequence

MHNVVVSGPSTTTVVQRQTLIEGSPVSSGKEVKRVKARENHSNSRLKKTKLENGDSWRSNGFSNTSFFLSTAFSDVISSSQGLKISFPRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS

Homology

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: XP_008446409.1 (PREDICTED: cell division topological specificity factor homolog, chloroplastic [Cucumis melo] >KAA0034453.1 cell division topological specificity factor-like protein [Cucumis melo var. makuwa] >TYK17681.1 cell division topological specificity factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 322.4 bits (825), Expect = 4.0e-84
Identity = 173/201 (86.07%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILS
Sbjct: 29  KADFSSFVHRRYGNKGTRPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLKLAWRIIF-PSSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDD 208

Query: 269 GEGSASAGLIFDSLIADGKGS 290
           GE S SAGLIFDSL+ADGKGS
Sbjct: 209 GEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: XP_004135443.3 (cell division topological specificity factor homolog, chloroplastic [Cucumis sativus] >KAE8648758.1 hypothetical protein Csa_007843 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 2.2e-82
Identity = 169/199 (84.92%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + DLSS V+RR+G+KG +PK HTM+HENDS+HSISLE+VESS NYERS KSLS+ESFILS
Sbjct: 29  KADLSSFVHRRYGNKGTRPKWHTMSHENDSLHSISLENVESSENYERSSKSLSEESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLTLAWRIIF-PSSAPKMESNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV    NT+LKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGEIANTNLKDD 208

Query: 269 GEGSASAGLIFDSLIADGK 288
           GE S SAGLIFDSL+ADGK
Sbjct: 209 GEESGSAGLIFDSLVADGK 226

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: KAG6601459.1 (Cell division topological specificity factor-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-80
Identity = 168/200 (84.00%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           +VDLS  V+RR G+KGIKPK  TMAHEND+IHSIS +DVESSA+YERSP+SLSQESFILS
Sbjct: 29  KVDLSGFVHRRSGNKGIKPKWRTMAHENDTIHSISQQDVESSADYERSPRSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMILLSDRCAVNDE KQKIVD++
Sbjct: 89  SMKMNFLERLILAWRIIF-PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSM 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+ AT NT+LKDD
Sbjct: 149 LSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKDD 208

Query: 269 GEGSASAGLIFDSLIADGKG 289
           GE S SAG IFDSLIA+GKG
Sbjct: 209 GERSGSAGPIFDSLIAEGKG 227

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: XP_023551705.1 (cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023551706.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.5 bits (794), Expect = 1.6e-80
Identity = 169/199 (84.92%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           +VDLS  V+RR G+KGIKPK  TMAHENDSIHSIS +DVESSA+YERSP+SLSQESFILS
Sbjct: 29  KVDLSGFVHRRSGNKGIKPKWRTMAHENDSIHSISQQDVESSADYERSPRSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMILLSDRCAVNDE KQKIVD++
Sbjct: 89  SMKMNFLERLILAWRIIF-PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSM 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEEV AT NT+LKDD
Sbjct: 149 LSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEVGATINTELKDD 208

Query: 269 GEGSASAGLIFDSLIADGK 288
           GE S SAG IFDSLIA+GK
Sbjct: 209 GERSGSAGPIFDSLIAEGK 226

[Close]

BLAST of ClCG05G023910 vs. NCBI nr
Match: XP_022957365.1 (cell division topological specificity factor homolog, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 310.1 bits (793), Expect = 2.0e-80
Identity = 167/200 (83.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 88  PRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFIL 147
           P+VDLS  V+RR G+KGIKPK  TMAHENDSIH IS +DVESSA+YERSP+SLSQESFIL
Sbjct: 28  PKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIHGISQQDVESSADYERSPRSLSQESFIL 87

Query: 148 SSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDN 207
           SSM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMILLSDRCAVNDE KQKIVD+
Sbjct: 88  SSMKMNFLERLILAWRIIF-PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDS 147

Query: 208 ILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKD 267
           +LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+ AT NT+LKD
Sbjct: 148 MLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKD 207

Query: 268 DGEGSASAGLIFDSLIADGK 288
           DGE S SAG IFD+LIA+GK
Sbjct: 208 DGERSGSAGPIFDALIAEGK 226

[Close]

BLAST of ClCG05G023910 vs. ExPASy Swiss-Prot
Match: Q9C4Z7 (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MINE1 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.7e-38
Identity = 90/153 (58.82%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 129 SSANYERSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLK 188
           ++ +YE SP    Q  ESF+ +++NM F +RL LAW+IIF P+   + +SNA IAKQRLK
Sbjct: 74  NTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIF-PSHASRRSSNARIAKQRLK 133

Query: 189 MILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRR 248
           MIL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ NVSTD DL TIYSVTVPVRR
Sbjct: 134 MILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRR 193

Query: 249 VKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF 280
           VK EYQ  +E    TN + KD  +GS      F
Sbjct: 194 VKPEYQDVDEAGTITNVEYKDTRDGSVDVRFDF 225

[Close]

BLAST of ClCG05G023910 vs. ExPASy TrEMBL
Match: A0A5A7SVD6 (Cell division topological specificity factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00060 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.9e-84
Identity = 173/201 (86.07%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILS
Sbjct: 29  KADFSSFVHRRYGNKGTRPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLKLAWRIIF-PSSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDD 208

Query: 269 GEGSASAGLIFDSLIADGKGS 290
           GE S SAGLIFDSL+ADGKGS
Sbjct: 209 GEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of ClCG05G023910 vs. ExPASy TrEMBL
Match: A0A1S3BEH9 (cell division topological specificity factor homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489163 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.9e-84
Identity = 173/201 (86.07%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILS
Sbjct: 29  KADFSSFVHRRYGNKGTRPKWHTMAHENDSLHSISLENVENSAKYEQSSKSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLKLAWRIIF-PSSAPKMKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGAITNTDLKDD 208

Query: 269 GEGSASAGLIFDSLIADGKGS 290
           GE S SAGLIFDSL+ADGKGS
Sbjct: 209 GEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of ClCG05G023910 vs. ExPASy TrEMBL
Match: A0A0A0KQS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606490 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.3e-83
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           + DLSS V+RR+G+KG +PK HTM+HENDS+HSISLE+VESS NYERS KSLS+ESFILS
Sbjct: 29  KADLSSFVHRRYGNKGTRPKWHTMSHENDSLHSISLENVESSENYERSSKSLSEESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMILLSDRCAVNDEAKQKIVDNI
Sbjct: 89  SMNMNFLERLTLAWRIIF-PSSAPKMESNATIAKQRLKMILLSDRCAVNDEAKQKIVDNI 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV    NT+LKDD
Sbjct: 149 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVGEIANTNLKDD 208

Query: 269 GEGSASAGLIFDSLIADGKGS 290
           GE S SAGLIFDSL+ADGKGS
Sbjct: 209 GEESGSAGLIFDSLVADGKGS 228

[Close]

BLAST of ClCG05G023910 vs. ExPASy TrEMBL
Match: A0A6J1H0C0 (cell division topological specificity factor homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458787 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 9.9e-81
Identity = 167/200 (83.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 88  PRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFIL 147
           P+VDLS  V+RR G+KGIKPK  TMAHENDSIH IS +DVESSA+YERSP+SLSQESFIL
Sbjct: 28  PKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIHGISQQDVESSADYERSPRSLSQESFIL 87

Query: 148 SSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDN 207
           SSM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMILLSDRCAVNDE KQKIVD+
Sbjct: 88  SSMKMNFLERLILAWRIIF-PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDS 147

Query: 208 ILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKD 267
           +LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+ AT NT+LKD
Sbjct: 148 MLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKD 207

Query: 268 DGEGSASAGLIFDSLIADGK 288
           DGE S SAG IFD+LIA+GK
Sbjct: 208 DGERSGSAGPIFDALIAEGK 226

[Close]

BLAST of ClCG05G023910 vs. ExPASy TrEMBL
Match: A0A6J1K368 (cell division topological specificity factor homolog, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491965 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 3.8e-80
Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 89  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILS 148
           +VDLS  V+RR G+KGIKPK  TMAHEND IHSIS +DVESSA+YERSP+SLSQESFILS
Sbjct: 29  KVDLSGFVHRRSGNKGIKPKWRTMAHENDRIHSISEQDVESSADYERSPRSLSQESFILS 88

Query: 149 SMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNI 208
           SM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMILLSDRCAVNDE KQKIVD++
Sbjct: 89  SMKMNFLERLILAWRIIF-PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSM 148

Query: 209 LSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDD 268
           LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEEV AT NT+LKDD
Sbjct: 149 LSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEVGATINTELKDD 208

Query: 269 GEGSASAGLIFDSLIADGKG 289
           GE S  AG IFDSLIA+GKG
Sbjct: 209 GERSGPAGPIFDSLIAEGKG 227

[Close]

BLAST of ClCG05G023910 vs. TAIR 10
Match: AT1G69390.1 (homologue of bacterial MinE 1 )

HSP 1 Score: 159.1 bits (401), Expect = 5.4e-39
Identity = 90/153 (58.82%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 129 SSANYERSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLK 188
           ++ +YE SP    Q  ESF+ +++NM F +RL LAW+IIF P+   + +SNA IAKQRLK
Sbjct: 74  NTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIF-PSHASRRSSNARIAKQRLK 133

Query: 189 MILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRR 248
           MIL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ NVSTD DL TIYSVTVPVRR
Sbjct: 134 MILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIYSVTVPVRR 193

Query: 249 VKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF 280
           VK EYQ  +E    TN + KD  +GS      F
Sbjct: 194 VKPEYQDVDEAGTITNVEYKDTRDGSVDVRFDF 225

The following BLAST results are available for this feature:

BLAST of ClCG05G023910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446409.1	4.0e-84	86.07	PREDICTED: cell division topological specificity factor homolog, chloroplastic [...	[more]
XP_004135443.3	2.2e-82	84.92	cell division topological specificity factor homolog, chloroplastic [Cucumis sat...	[more]
KAG6601459.1	1.2e-80	84.00	Cell division topological specificity factor-like, chloroplastic, partial [Cucur...	[more]
XP_023551705.1	1.6e-80	84.92	cell division topological specificity factor homolog, chloroplastic-like [Cucurb...	[more]
XP_022957365.1	2.0e-80	83.50	cell division topological specificity factor homolog, chloroplastic-like [Cucurb...	[more]

BLAST of ClCG05G023910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C4Z7	7.7e-38	58.82	Cell division topological specificity factor homolog, chloroplastic OS=Arabidops...	[more]

BLAST of ClCG05G023910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVD6	1.9e-84	86.07	Cell division topological specificity factor-like protein OS=Cucumis melo var. m...	[more]
A0A1S3BEH9	1.9e-84	86.07	cell division topological specificity factor homolog, chloroplastic OS=Cucumis m...	[more]
A0A0A0KQS2	1.3e-83	85.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606490 PE=3 SV=1	[more]
A0A6J1H0C0	9.9e-81	83.50	cell division topological specificity factor homolog, chloroplastic-like OS=Cucu...	[more]
A0A6J1K368	3.8e-80	84.00	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]

BLAST of ClCG05G023910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69390.1	5.4e-39	58.82	homologue of bacterial MinE 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005527	Cell division topological specificity factor MinE	PFAM	PF03776	MinE	coord: 179..245 e-value: 1.3E-13 score: 50.7
IPR005527	Cell division topological specificity factor MinE	PANTHER	PTHR33404	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 90..274
IPR036707	Cell division topological specificity factor MinE superfamily	GENE3D	3.30.1070.10	Cell division topological specificity factor MinE	coord: 166..244 e-value: 1.6E-7 score: 32.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..273
None	No IPR available	PANTHER	PTHR33404:SF2	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 90..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G023910.1	ClCG05G023910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0032955	regulation of division septum assembly
biological_process	GO:0051301	cell division