Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAACAACCCTATCCGTTGTGTACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAAAGAGCTTCTCTCAACACTCAATTCCCTCGTCCCCCATGAAAGTTCAAAGGTTTTTTTTTTTTTTTTTTTTTTTCTCTCTTTTTAATTTATATATATGACTATATCTTATTATATTATTTTTAGTAAAAATTTTGAATAATGTTTGTGTGCAGGAAGCAAGAACAGTGGTGGATGAGTTAGAAGACGCCACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAAATTAAAATGGTTGAGTTAGAAGATGGAAGAAGAAATAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGTTGCAAGTTAAAGCTCATCAACTGGATTCTACACTGCACATCCTTTTGACAACTGGATCTGATTATCACCCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGAGTCAAACATCGGGTTTTTCACACTATTGTAGCTAAGGTAATTTAGGTCTCGTTTAATAACTATTTTACTTCTAACATTATTTCTACCTTTTATCGTCTCCTGTCTGCCTTCAAAATTCAAACAATTTGCAATAAACAAACTTTGTTATTATATATTTTTTTTTATTAGGAAAAATGGTTTTTAAAAATTTCTTTTTGTTTTTAAAATTTAATTAAGAATTCACAAATTCAAACTTGTGAAAAAACTTTGCAGATTTTTTTTTTTTTTTAAAAAAATGAAACAGCTAAATGATTATTTATTTTCCTTTCAACTTTTTGGTGTCTCACACAAATTAATTATATAAAATGTGTTTAATTCATTTCATAAATAATTATTAAGAGGACAATTTGTTGTTTCATGGTTGAAAATTTGATTTCCCACTAGAAACGTTTCAAAAAAGAGAATGGAAAATGGGGAAAAAAAAAGTCACGTGGGTTATCTTGTTATCTACAAAAATAATTCACGTATGGAAATAAATATAGTTTTGTTTATCGTTTTTTTTTTTTTTTTTTTGGACTTTTTCCCTTTCTTTTCTTCTTTTTGAGTTCTTATCCATTAGGTTTCTGAAGCTTACCAGAGAAATGGTAGAAACCACGGAGAGGGAAGGATAAGAGAGTTATTTTTTAAGGTCAAATAATTAACATTTACGTTCTATTTGAAAACTGTTTTAATTTTGTATAATTAACATAAACGTATTTTTTAAAACTAATTTATTGTTTATTCTAAACCTGACTTAAAATTTGAAAATGTTGTAGACAATAAAACAAGTGAACACTTGGATGGAAGTAGTATACTTCATTTTAAAAAATAAGAAACCAGAAAACAAATGGAGTCTTAGTTTTGGAAAACTCTATTGTTTTCTCACAATTTTTTTTTTTAATAGTCTTCATATTTTTTAAGGTAATATTTGAATCCGGTTAAAAAACTATATTTTAAGACTTAGTATGGTAATTAACCATTTAAACTTTTTGTTTTTAGTTTTTGAAAATTAAGCCTTAAACACTTTTTTTACCTCCAAATTTTTTTATTTATTATATAATTTTTATCAATATTTTCAAAAACTATGACAAATTTTGAGACAAAAATTTATTTTTCAAAAAATTATTTTTGTTAATAAAAATTTAGCTAAGAATCTAACTATTTTAAAATTATTATAAAACATTGAGAGAAAATATATACTTAATTTTCAAAAACTTAACATCCAAATTCAAATAGTTATTAAACTAGGTTGAATTAGTTTTCAAATTGTAGATTTAAAAACCATGAAAGTTGTGTTTCCAAGTTCAAATTTCCAAAACCCAAATAATATGTCAAACAACGTCAAAATTTCAATATTGGTTTCATCCATAAATTTCATGCTTACAAACTATATCTATTGATTTTGTTCTCATTTACTATTGGAAAACGTAAGAATTAATTTAACAATTTTCTTTTTTTTTTTGTTTTGTCACGAATCATTTCTTATATTTCTTATTTGGAAATACACATAATAATGCTAATTAACGTTAGGCAAATAACAATTCATACCCCTAAACTTTGGAGGATATATCAATTTAAACCCTAAACTAATAATCATATCAACTTAAACTCCGAACTTTCATAAATGTGTCGATTTTAACCAGAACCTAATAACTGTATTAGTTTAAACCCTAAACTTTCATAAGTGTATCAATTGAAATCCTCCATTATGTTTTATTTGGATACAGTTATGAAAGTTTAGAGTTTAAATTGATATACTTATGAAAGTTTAAGGTTTAAATTGACACATATAATTATTAGTTTGGGGTTTAGATCGATACAAATCTCAAAGTTTAGGATTTAAATTTATATAATCAATTAGTTTGAGAGTTTAAATTGATACAATCTCTAAAGTTTAAGATATAAATTGATATAACATTACAGTGTGGGAGAAAAAAATGATGATAATATATTGCAAATTTAGGTGGATGGAGAAGGAATGGGGCCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAAAGATGGCGAATGCACTCTTTAATAATATTTCGACCACA
mRNA sequence
ATGGCGAACAACCCTATCCGTTGTGTACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAAAGAGCTTCTCTCAACACTCAATTCCCTCGTCCCCCATGAAAGTTCAAAGGAAGCAAGAACAGTGGTGGATGAGTTAGAAGACGCCACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAAATTAAAATGGTTGAGTTAGAAGATGGAAGAAGAAATAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGTTGCAAGTTAAAGCTCATCAACTGGATTCTACACTGCACATCCTTTTGACAACTGGATCTGATTATCACCCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGAGTCAAACATCGGGTTTTTCACACTATTGTAGCTAAGGTGGATGGAGAAGGAATGGGGCCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAAAGATGGCGAATGCACTCTTTAATAATATTTCGACCACA
Coding sequence (CDS)
ATGGCGAACAACCCTATCCGTTGTGTACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAAAGAGCTTCTCTCAACACTCAATTCCCTCGTCCCCCATGAAAGTTCAAAGGAAGCAAGAACAGTGGTGGATGAGTTAGAAGACGCCACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAAATTAAAATGGTTGAGTTAGAAGATGGAAGAAGAAATAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGTTGCAAGTTAAAGCTCATCAACTGGATTCTACACTGCACATCCTTTTGACAACTGGATCTGATTATCACCCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGAGTCAAACATCGGGTTTTTCACACTATTGTAGCTAAGGTGGATGGAGAAGGAATGGGGCCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAAAGATGGCGAATGCACTCTTTAA
Protein sequence
MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYIKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPEDGERICETVKNLVSEYKDGECTL
Homology
BLAST of ClCG05G023890 vs. NCBI nr
Match:
XP_008442634.2 (PREDICTED: transcription factor bHLH118-like [Cucumis melo])
HSP 1 Score: 240.4 bits (612), Expect = 1.4e-59
Identity = 129/198 (65.15%), Postives = 159/198 (80.30%), Query Frame = 0
Query: 3 NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
+NPIRC P+ Q+D+K +E NRRKEMK L STLNSL+P+ +S+EA RTV D+LEDATNYIK
Sbjct: 2 SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61
Query: 63 ELQNHIEKLKEKKEKLMGKIKMVELE--DGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 122
ELQ +I+KLKEKKE+LMGK KM E E +GRR R+ ETK PKLLLQVKAHQ+ S++
Sbjct: 62 ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETK--PKLLLQVKAHQIGSSVE 121
Query: 123 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPEDGERI 182
+ LTTGSDYH ILQQ+L LL DNG + L+VNQ+ RVFH I A+VDGEG+GP DGERI
Sbjct: 122 VFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGPGDGERI 181
Query: 183 CETVKNLVSEYKDGECTL 198
C+TVK VS+YKD +C++
Sbjct: 182 CKTVKKFVSQYKDEQCSV 197
BLAST of ClCG05G023890 vs. NCBI nr
Match:
XP_038876951.1 (transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876954.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876955.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876956.1 transcription factor bHLH162-like [Benincasa hispida])
HSP 1 Score: 224.6 bits (571), Expect = 7.7e-55
Identity = 128/204 (62.75%), Postives = 154/204 (75.49%), Query Frame = 0
Query: 1 MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYI 60
MANNPI C PS KLIE N R+EMK L STLNSL+P+++S EARTV D+LE+ATNYI
Sbjct: 1 MANNPICCPPS-----KLIERNGRREMKALFSTLNSLLPNQNSGEARTVPDQLEEATNYI 60
Query: 61 KELQNHIEKLKEKKEKL------MGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQL 120
KELQN+IE+LKEKKEKL GK KM ED +R + KHE P LLLQVKAH++
Sbjct: 61 KELQNNIERLKEKKEKLKQKQKVKGKYKMGVEEDEKRRKCKHE---IEPNLLLQVKAHRV 120
Query: 121 DSTLHILLTTG-SDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGP 180
S++ + LTTG SDYH ILQQI+ LL NG L++NQ+ ++HR FH I A+VDGEGM P
Sbjct: 121 GSSVEVFLTTGISDYHFILQQIIRLLQHNGAHILNLNQSILQHRAFHKITAQVDGEGMVP 180
Query: 181 EDGERICETVKNLVSEYKDGECTL 198
EDGERICETVKN VS+YKDG+C+L
Sbjct: 181 EDGERICETVKNFVSQYKDGQCSL 196
BLAST of ClCG05G023890 vs. NCBI nr
Match:
XP_004146605.1 (transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetical protein Csa_013539 [Cucumis sativus])
HSP 1 Score: 224.2 bits (570), Expect = 1.0e-54
Identity = 124/197 (62.94%), Postives = 152/197 (77.16%), Query Frame = 0
Query: 3 NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
+NPIRC P+ Q+++K +E NRRKEMK L STLNSL+P+++S EA RTV D+LEDATNYIK
Sbjct: 2 SNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYIK 61
Query: 63 ELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHIL 122
ELQ +I+KLKEKKEKLMG + E E RR R +ETK PKL + VKAHQ+ S++ +
Sbjct: 62 ELQKNIKKLKEKKEKLMGMEEDEEAEGRRRRRGYEDETK--PKLSVHVKAHQIGSSVEVF 121
Query: 123 LTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEG-MGPEDGERIC 182
LTTGSDYH LQQ+L LL DNG + L+VNQ+ RVFH I A+VDGEG +G DGERIC
Sbjct: 122 LTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGILGGGDGERIC 181
Query: 183 ETVKNLVSEYKDGECTL 198
ETVK VSEYKDGEC++
Sbjct: 182 ETVKKYVSEYKDGECSV 196
BLAST of ClCG05G023890 vs. NCBI nr
Match:
XP_023542777.1 (uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 185.3 bits (469), Expect = 5.2e-43
Identity = 110/195 (56.41%), Postives = 144/195 (73.85%), Query Frame = 0
Query: 1 MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
MANN I C S++ D+KLIE NRR EMK L S L+SLVP++SS EA T++D+LE+ATNY
Sbjct: 1 MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 60
Query: 61 IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
IK+L+ ++EKLKEKKEKLM K+ E E RR+ K +LL+QV+AHQ+ S+L
Sbjct: 61 IKQLKENVEKLKEKKEKLM---KLGE-ESARRSEIK-------ARLLVQVEAHQVGSSLE 120
Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
LLTTGS+YH +L+QIL LL +NGT +++N + VK RVFH I+A++ GEG E +GE
Sbjct: 121 FLLTTGSEYHLVLKQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTEGE 180
Query: 181 RICETVKNLVSEYKD 193
RICETVK VS+YKD
Sbjct: 181 RICETVKKFVSQYKD 184
BLAST of ClCG05G023890 vs. NCBI nr
Match:
KAG6573268.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 184.1 bits (466), Expect = 1.2e-42
Identity = 109/195 (55.90%), Postives = 143/195 (73.33%), Query Frame = 0
Query: 1 MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
MANN I C S++ D+KLIE NRR EMK L S L+SLVP++SS EA T++D+LE+ATNY
Sbjct: 22 MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81
Query: 61 IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
IK+L+ ++EKLKEKKEKLM K+ E E R + K +LL+QV+AHQ+ S+L
Sbjct: 82 IKQLKENVEKLKEKKEKLM---KLGE-ESARSSEIK-------ARLLVQVEAHQVGSSLE 141
Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
LLTTGSDYH +L+Q+L LL +NGT +++N + VK RVFH I+A++ GEG E +GE
Sbjct: 142 FLLTTGSDYHLVLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGE 201
Query: 181 RICETVKNLVSEYKD 193
RICETVK VS+YKD
Sbjct: 202 RICETVKKFVSQYKD 205
BLAST of ClCG05G023890 vs. ExPASy Swiss-Prot
Match:
F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 7.3e-16
Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 0
Query: 11 SSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYIKELQNHIEKL 70
S D+K +E NRR +MK L S L SL+PH SS E T+ D+L++A NYIK+LQ ++EK
Sbjct: 11 SRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEPLTLPDQLDEAANYIKKLQVNVEKK 70
Query: 71 KEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHILLTTGSDYHP 130
+E+K L+ + +L + P+ L +++ + S HI L T ++
Sbjct: 71 RERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKF 130
Query: 131 ILQQIL-LLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMG-----PEDGERICETV 184
+ +I+ +L + G + H + V VFHT+ KV+ G PE E+I +V
Sbjct: 131 MFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGARSQIPERLEKIVNSV 189
BLAST of ClCG05G023890 vs. ExPASy TrEMBL
Match:
A0A1S3B660 (transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 6.6e-60
Identity = 129/198 (65.15%), Postives = 159/198 (80.30%), Query Frame = 0
Query: 3 NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
+NPIRC P+ Q+D+K +E NRRKEMK L STLNSL+P+ +S+EA RTV D+LEDATNYIK
Sbjct: 2 SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61
Query: 63 ELQNHIEKLKEKKEKLMGKIKMVELE--DGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 122
ELQ +I+KLKEKKE+LMGK KM E E +GRR R+ ETK PKLLLQVKAHQ+ S++
Sbjct: 62 ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETK--PKLLLQVKAHQIGSSVE 121
Query: 123 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPEDGERI 182
+ LTTGSDYH ILQQ+L LL DNG + L+VNQ+ RVFH I A+VDGEG+GP DGERI
Sbjct: 122 VFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGPGDGERI 181
Query: 183 CETVKNLVSEYKDGECTL 198
C+TVK VS+YKD +C++
Sbjct: 182 CKTVKKFVSQYKDEQCSV 197
BLAST of ClCG05G023890 vs. ExPASy TrEMBL
Match:
A0A0A0LUL3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 4.9e-55
Identity = 124/197 (62.94%), Postives = 152/197 (77.16%), Query Frame = 0
Query: 3 NNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEA-RTVVDELEDATNYIK 62
+NPIRC P+ Q+++K +E NRRKEMK L STLNSL+P+++S EA RTV D+LEDATNYIK
Sbjct: 2 SNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYIK 61
Query: 63 ELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHIL 122
ELQ +I+KLKEKKEKLMG + E E RR R +ETK PKL + VKAHQ+ S++ +
Sbjct: 62 ELQKNIKKLKEKKEKLMGMEEDEEAEGRRRRRGYEDETK--PKLSVHVKAHQIGSSVEVF 121
Query: 123 LTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEG-MGPEDGERIC 182
LTTGSDYH LQQ+L LL DNG + L+VNQ+ RVFH I A+VDGEG +G DGERIC
Sbjct: 122 LTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGILGGGDGERIC 181
Query: 183 ETVKNLVSEYKDGECTL 198
ETVK VSEYKDGEC++
Sbjct: 182 ETVKKYVSEYKDGECSV 196
BLAST of ClCG05G023890 vs. ExPASy TrEMBL
Match:
A0A6J1K2Y3 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 7.3e-43
Identity = 107/195 (54.87%), Postives = 139/195 (71.28%), Query Frame = 0
Query: 1 MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
MANN I C S++ D+KLIE NRR EMK L S L+SLVP++SS EA T++D+LE+ATNY
Sbjct: 22 MANNFIHCPSSTKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81
Query: 61 IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
IK+L+ ++EKLKEK+EKLMG + ETK +LL+QV+AHQ+ S+L
Sbjct: 82 IKQLKENVEKLKEKREKLMG--------------SREGETK--ARLLVQVEAHQVGSSLE 141
Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPED--GE 180
+LLTTGSDY +L QIL LL +NGT +++N + VK RVFH I+A++ GEG E GE
Sbjct: 142 VLLTTGSDYQFVLNQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTKGE 200
Query: 181 RICETVKNLVSEYKD 193
RICETVK VS+YKD
Sbjct: 202 RICETVKKFVSQYKD 200
BLAST of ClCG05G023890 vs. ExPASy TrEMBL
Match:
A0A6J1GT92 (uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC111457229 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 6.8e-41
Identity = 107/195 (54.87%), Postives = 141/195 (72.31%), Query Frame = 0
Query: 1 MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEAR-TVVDELEDATNY 60
MANN I S++ D+KLIE NRR EMK L S L+SLVP++SS EA T++D+LE+ATNY
Sbjct: 22 MANNFIHSPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSMEAETTLLDQLENATNY 81
Query: 61 IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
IK+L+ ++EKLKEKKEKLM K+ E E R + K +LL+QV+AHQ+ S+L
Sbjct: 82 IKQLKENVEKLKEKKEKLM---KLGE-ESARSSEIK-------ARLLVQVEAHQVGSSLE 141
Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
LLTT SDYH +L+Q+L LL +NGT +++N + VK RVFH I+A++ GEG E +GE
Sbjct: 142 FLLTTRSDYHLVLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGE 201
Query: 181 RICETVKNLVSEYKD 193
RICETVK VS+YKD
Sbjct: 202 RICETVKKFVSQYKD 205
BLAST of ClCG05G023890 vs. ExPASy TrEMBL
Match:
A0A6J1K483 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE=4 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40
Identity = 100/200 (50.00%), Postives = 140/200 (70.00%), Query Frame = 0
Query: 1 MANNPIRCVPSSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVV-DELEDATNY 60
MA+N I C S++TDQ++IE NRR EMK LLS L+SLVP+++S E T + D+LE+ATNY
Sbjct: 1 MADNFIYCPSSAKTDQEIIERNRRDEMKALLSQLHSLVPNQNSTEGETTLPDQLENATNY 60
Query: 61 IKELQNHIEKLKEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLH 120
IK+L+ ++EKLKEK+EKLMG K ++ ++++QV+AH + S+L
Sbjct: 61 IKQLKENVEKLKEKREKLMG-----------LGEKSTITSENKARVIVQVEAHLVGSSLE 120
Query: 121 ILLTTGSDYHPILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGPE--DGE 180
ILLTTGSDYH +L+QI+ LL +NGT+ + +NQ+ V +R FH I+A++ GEG E GE
Sbjct: 121 ILLTTGSDYHLVLRQIIQLLQENGTEIVDINQSTVANRAFHKIIAQMAGEGTTLEGAKGE 180
Query: 181 RICETVKNLVSEYKDGECTL 198
RICE VK VS YKD + T+
Sbjct: 181 RICERVKKFVSHYKDDQYTV 189
BLAST of ClCG05G023890 vs. TAIR 10
Match:
AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )
HSP 1 Score: 85.5 bits (210), Expect = 5.2e-17
Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 0
Query: 11 SSQTDQKLIETNRRKEMKELLSTLNSLVPHESSKEARTVVDELEDATNYIKELQNHIEKL 70
S D+K +E NRR +MK L S L SL+PH SS E T+ D+L++A NYIK+LQ ++EK
Sbjct: 11 SRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEPLTLPDQLDEAANYIKKLQVNVEKK 70
Query: 71 KEKKEKLMGKIKMVELEDGRRNRKKHEETKPNPKLLLQVKAHQLDSTLHILLTTGSDYHP 130
+E+K L+ + +L + P+ L +++ + S HI L T ++
Sbjct: 71 RERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKF 130
Query: 131 ILQQIL-LLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMG-----PEDGERICETV 184
+ +I+ +L + G + H + V VFHT+ KV+ G PE E+I +V
Sbjct: 131 MFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGARSQIPERLEKIVNSV 189
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008442634.2 | 1.4e-59 | 65.15 | PREDICTED: transcription factor bHLH118-like [Cucumis melo] | [more] |
XP_038876951.1 | 7.7e-55 | 62.75 | transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcript... | [more] |
XP_004146605.1 | 1.0e-54 | 62.94 | transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetic... | [more] |
XP_023542777.1 | 5.2e-43 | 56.41 | uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo] | [more] |
KAG6573268.1 | 1.2e-42 | 55.90 | Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma... | [more] |
Match Name | E-value | Identity | Description | |
F4JIJ7 | 7.3e-16 | 32.96 | Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B660 | 6.6e-60 | 65.15 | transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 S... | [more] |
A0A0A0LUL3 | 4.9e-55 | 62.94 | BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 S... | [more] |
A0A6J1K2Y3 | 7.3e-43 | 54.87 | transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE... | [more] |
A0A6J1GT92 | 6.8e-41 | 54.87 | uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC1114572... | [more] |
A0A6J1K483 | 2.6e-40 | 50.00 | transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE... | [more] |
Match Name | E-value | Identity | Description | |
AT4G20970.1 | 5.2e-17 | 32.96 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | [more] |