ClCG05G023860 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTTCCTGTCTAAACTCGGCGGCTCCACCGACAAGCCACAAGACCAAAACCCAGACCACCACAAGACATCGGCTTCCGATCTCTTGTCCAGCGCCAAGCTGGTTGCTGACGCCGCCAAATCCTCTTTTGGCGGCGGCGGCGACTCTGTTGACAAGGGCAAAGTCGCCGGAGCCACTGCCGACCTTCTCGGAGCTGCTTCTGATTACGGCAAATTGGATGAAACCAAGGGAATTGGTAAGTACGTTGATCAGGCTGAGGACTATCTCAATAAGTATGAAAAGTCTCATTCTGCTCCTCATGGTTCCGGCACCGAGCCGAAGGCCGAGGAACCACCGAAGGCAGAAGAGCCGCCGAAGAAGGAGAACGCCGGCGAGAAGGAAGAGGGAGGATCTGGGTTTGGGGATTATTTGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA ATGGACTTCCTGTCTAAACTCGGCGGCTCCACCGACAAGCCACAAGACCAAAACCCAGACCACCACAAGACATCGGCTTCCGATCTCTTGTCCAGCGCCAAGCTGGTTGCTGACGCCGCCAAATCCTCTTTTGGCGGCGGCGGCGACTCTGTTGACAAGGGCAAAGTCGCCGGAGCCACTGCCGACCTTCTCGGAGCTGCTTCTGATTACGGCAAATTGGATGAAACCAAGGGAATTGGTAAGTACGTTGATCAGGCTGAGGACTATCTCAATAAGTATGAAAAGTCTCATTCTGCTCCTCATGGTTCCGGCACCGAGCCGAAGGCCGAGGAACCACCGAAGGCAGAAGAGCCGCCGAAGAAGGAGAACGCCGGCGAGAAGGAAGAGGGAGGATCTGGGTTTGGGGATTATTTGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA ATGGACTTCCTGTCTAAACTCGGCGGCTCCACCGACAAGCCACAAGACCAAAACCCAGACCACCACAAGACATCGGCTTCCGATCTCTTGTCCAGCGCCAAGCTGGTTGCTGACGCCGCCAAATCCTCTTTTGGCGGCGGCGGCGACTCTGTTGACAAGGGCAAAGTCGCCGGAGCCACTGCCGACCTTCTCGGAGCTGCTTCTGATTACGGCAAATTGGATGAAACCAAGGGAATTGGTAAGTACGTTGATCAGGCTGAGGACTATCTCAATAAGTATGAAAAGTCTCATTCTGCTCCTCATGGTTCCGGCACCGAGCCGAAGGCCGAGGAACCACCGAAGGCAGAAGAGCCGCCGAAGAAGGAGAACGCCGGCGAGAAGGAAGAGGGAGGATCTGGGTTTGGGGATTATTTGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA MDFLSKLGGSTDKPQDQNPDHHKTSASDLLSSAKLVADAAKSSFGGGGDSVDKGKVAGATADLLGAASDYGKLDETKGIGKYVDQAEDYLNKYEKSHSAPHGSGTEPKAEEPPKAEEPPKKENAGEKEEGGSGFGDYLKVAEGFLKK Homology
BLAST of ClCG05G023860 vs. NCBI nr
Match: XP_038893443.1 (nodulin-related protein 1-like [Benincasa hispida]) HSP 1 Score: 236.1 bits (601), Expect = 1.9e-58 Identity = 125/147 (85.03%), Postives = 131/147 (89.12%), Query Frame = 0
BLAST of ClCG05G023860 vs. NCBI nr
Match: XP_022151057.1 (nodulin-related protein 1-like [Momordica charantia] >XP_022157122.1 nodulin-related protein 1-like [Momordica charantia]) HSP 1 Score: 227.6 bits (579), Expect = 6.8e-56 Identity = 122/147 (82.99%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of ClCG05G023860 vs. NCBI nr
Match: XP_004135154.1 (nodulin-related protein 1 [Cucumis sativus] >KGN51963.1 hypothetical protein Csa_008710 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55 Identity = 119/148 (80.41%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of ClCG05G023860 vs. NCBI nr
Match: XP_022945442.1 (nodulin-related protein 1-like [Cucurbita moschata] >KAG6574054.1 Nodulin-related protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50 Identity = 114/147 (77.55%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of ClCG05G023860 vs. NCBI nr
Match: XP_022968319.1 (nodulin-related protein 1-like [Cucurbita maxima]) HSP 1 Score: 209.9 bits (533), Expect = 1.5e-50 Identity = 113/147 (76.87%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of ClCG05G023860 vs. ExPASy Swiss-Prot
Match: Q9ZQ80 (Nodulin-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.6e-21 Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0
BLAST of ClCG05G023860 vs. ExPASy TrEMBL
Match: A0A6J1DTQ5 (nodulin-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111023921 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56 Identity = 122/147 (82.99%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of ClCG05G023860 vs. ExPASy TrEMBL
Match: A0A0A0KQS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606550 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 9.6e-56 Identity = 119/148 (80.41%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of ClCG05G023860 vs. ExPASy TrEMBL
Match: A0A6J1G0Y4 (nodulin-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111449671 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 5.4e-51 Identity = 114/147 (77.55%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of ClCG05G023860 vs. ExPASy TrEMBL
Match: A0A6J1HZB1 (nodulin-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467584 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 7.1e-51 Identity = 113/147 (76.87%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of ClCG05G023860 vs. ExPASy TrEMBL
Match: A0A5D3D177 (Nodulin-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00020 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49 Identity = 114/150 (76.00%), Postives = 128/150 (85.33%), Query Frame = 0
BLAST of ClCG05G023860 vs. TAIR 10
Match: AT1G13930.1 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ) HSP 1 Score: 102.1 bits (253), Expect = 4.0e-22 Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 0
BLAST of ClCG05G023860 vs. TAIR 10
Match: AT1G13930.3 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ) HSP 1 Score: 102.1 bits (253), Expect = 4.0e-22 Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 0
BLAST of ClCG05G023860 vs. TAIR 10
Match: AT1G13930.2 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ) HSP 1 Score: 102.1 bits (253), Expect = 4.0e-22 Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 0
BLAST of ClCG05G023860 vs. TAIR 10
Match: AT2G03440.1 (nodulin-related protein 1 ) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-22 Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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