ClCG05G023610 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G023610
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein BIG GRAIN 1-like E
Location	CG_Chr05: 35402650 .. 35403462 (+)
RNA-Seq Expression	ClCG05G023610
Synteny	ClCG05G023610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTCACCGGCCACCTCTCCGGCAACCCAGATAAACTCTTCCGCAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGATGTCTTTGAAGCCGCCGGCTACTTCTCCGGTAGCAATGAACTCCAGTACAACGCCGCCTCCGTCGGTTACGATACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGATCACGGTGGCCGGAGAGGCGGAAGAATGAGCCTCGACTTACCAATAAGAAGCAATGTGATTCCTCTCCCACCACCGGCGTACACGGCGGAGAAACAAACAATTAAAGACCAGAAAAAACTCCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTAGCCAATTTCCTGAATTCTCTGTTCAATCAATCGTCTTCCAAAAAGAAAAAGAAACCCAAAAATCCAATAAAAAACGAAGATCTTCATCACGAAATGGGCGGAAAAAAAAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCATCTAATTCTTCAAAAATTTCAGGATTTAGAACTCCACCAGCTCCCCATTGCTGCACCGTACAAACTCCGAACAAAAATTACAAGGAAATCAGAAGCTTTTTGAATCAGAAACGGGCAGCTAATTCCAAGAATCTCGGAAATGGGATTAACCAAAAATCGGAGATGAGAAAAATCAACGATCCAGATGAAGGGGCTGAGAGTGATTCAAGTTCTGATCTTTTTGAGTTAAGGATTTATGATAAATTTGATTGTTATTCTTCAACTGAGTTGCCTGTGTATCAAACCACCAACATTCAAACCATCAACAAACTGTAA

mRNA sequence

ATGTCCGTCACCGGCCACCTCTCCGGCAACCCAGATAAACTCTTCCGCAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGATGTCTTTGAAGCCGCCGGCTACTTCTCCGGTAGCAATGAACTCCAGTACAACGCCGCCTCCGTCGGTTACGATACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGATCACGGTGGCCGGAGAGGCGGAAGAATGAGCCTCGACTTACCAATAAGAAGCAATGTGATTCCTCTCCCACCACCGGCGTACACGGCGGAGAAACAAACAATTAAAGACCAGAAAAAACTCCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTAGCCAATTTCCTGAATTCTCTGTTCAATCAATCGTCTTCCAAAAAGAAAAAGAAACCCAAAAATCCAATAAAAAACGAAGATCTTCATCACGAAATGGGCGGAAAAAAAAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCATCTAATTCTTCAAAAATTTCAGGATTTAGAACTCCACCAGCTCCCCATTGCTGCACCGTACAAACTCCGAACAAAAATTACAAGGAAATCAGAAGCTTTTTGAATCAGAAACGGGCAGCTAATTCCAAGAATCTCGGAAATGGGATTAACCAAAAATCGGAGATGAGAAAAATCAACGATCCAGATGAAGGGGCTGAGAGTGATTCAAGTTCTGATCTTTTTGAGTTAAGGATTTATGATAAATTTGATTGTTATTCTTCAACTGAGTTGCCTGTGTATCAAACCACCAACATTCAAACCATCAACAAACTGTAA

Coding sequence (CDS)

ATGTCCGTCACCGGCCACCTCTCCGGCAACCCAGATAAACTCTTCCGCAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGATGTCTTTGAAGCCGCCGGCTACTTCTCCGGTAGCAATGAACTCCAGTACAACGCCGCCTCCGTCGGTTACGATACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGATCACGGTGGCCGGAGAGGCGGAAGAATGAGCCTCGACTTACCAATAAGAAGCAATGTGATTCCTCTCCCACCACCGGCGTACACGGCGGAGAAACAAACAATTAAAGACCAGAAAAAACTCCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTAGCCAATTTCCTGAATTCTCTGTTCAATCAATCGTCTTCCAAAAAGAAAAAGAAACCCAAAAATCCAATAAAAAACGAAGATCTTCATCACGAAATGGGCGGAAAAAAAAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCATCTAATTCTTCAAAAATTTCAGGATTTAGAACTCCACCAGCTCCCCATTGCTGCACCGTACAAACTCCGAACAAAAATTACAAGGAAATCAGAAGCTTTTTGAATCAGAAACGGGCAGCTAATTCCAAGAATCTCGGAAATGGGATTAACCAAAAATCGGAGATGAGAAAAATCAACGATCCAGATGAAGGGGCTGAGAGTGATTCAAGTTCTGATCTTTTTGAGTTAAGGATTTATGATAAATTTGATTGTTATTCTTCAACTGAGTTGCCTGTGTATCAAACCACCAACATTCAAACCATCAACAAACTGTAA

Protein sequence

MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYNAASVGYDTSLFSQKIFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANFLNSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSSNSSKISGFRTPPAPHCCTVQTPNKNYKEIRSFLNQKRAANSKNLGNGINQKSEMRKINDPDEGAESDSSSDLFELRIYDKFDCYSSTELPVYQTTNIQTINKL

Homology

[Close]

BLAST of ClCG05G023610 vs. NCBI nr
Match: XP_038892897.1 (protein BIG GRAIN 1-like E [Benincasa hispida])

HSP 1 Score: 466.8 bits (1200), Expect = 1.2e-127
Identity = 245/273 (89.74%), Postives = 259/273 (94.87%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYNAASVGYDTSLFSQK 60
           MS+TGHLSGNPDKLFRKSLHRRKDSGELDVFEAA YFSGSNEL Y AA+  Y+TSLFSQK
Sbjct: 1   MSITGHLSGNPDKLFRKSLHRRKDSGELDVFEAARYFSGSNELPYTAATT-YETSLFSQK 60

Query: 61  IFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANFL 120
           IFREDHG RRGGRMSLDLPIR+NVIPLPPP YTAEKQ+IKDQKK RQQPSSPGGRLANFL
Sbjct: 61  IFREDHGDRRGGRMSLDLPIRTNVIPLPPPPYTAEKQSIKDQKKQRQQPSSPGGRLANFL 120

Query: 121 NSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSSNSSKISGFRTPPA 180
           NSLFNQSSSKKKKKPKNPI+NEDLH E+GGKKRRSSLSTLIDSK SSNSSKISGFRTPPA
Sbjct: 121 NSLFNQSSSKKKKKPKNPIRNEDLHQEIGGKKRRSSLSTLIDSKFSSNSSKISGFRTPPA 180

Query: 181 PHCCTVQTPNKNYKEIRSFLNQKRAAN-SKNLGNGIN-QKSEM-RKINDPDEGAESDSSS 240
           P+CCTVQTP+KNYKEIRSFL+QKRAAN SKNLGNGI+ +KSEM RKINDPDEG ESDSSS
Sbjct: 181 PNCCTVQTPSKNYKEIRSFLDQKRAANSSKNLGNGIDKKKSEMWRKINDPDEGDESDSSS 240

Query: 241 DLFELRIYDKFDCYSSTELPVYQTTNIQTINKL 271
           DLFELRIYDKFDCYSSTELPVYQTTNIQT+N+L
Sbjct: 241 DLFELRIYDKFDCYSSTELPVYQTTNIQTMNRL 272

[Close]

BLAST of ClCG05G023610 vs. NCBI nr
Match: XP_016900220.1 (PREDICTED: protein BIG GRAIN 1-like E [Cucumis melo] >KAA0034479.1 protein BIG GRAIN 1-like E [Cucumis melo var. makuwa] >TYK09033.1 protein BIG GRAIN 1-like E [Cucumis melo var. makuwa])

HSP 1 Score: 402.5 bits (1033), Expect = 2.8e-108
Identity = 215/276 (77.90%), Postives = 235/276 (85.14%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNE-LQYNAASVGYDTSLFSQ 60
           MSVT HLSG+P+K+FRKSLHRRKDS ELDVFEAA YFSGSNE   YN A+  Y+TSLF  
Sbjct: 1   MSVTSHLSGHPNKIFRKSLHRRKDSDELDVFEAASYFSGSNEPCNYNTATT-YETSLF-- 60

Query: 61  KIFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANF 120
                 HGGRRGGRMSLDLP+R+NVIPLPPP YTAEKQ+IKD KK RQQPSSPGGRLANF
Sbjct: 61  ------HGGRRGGRMSLDLPLRTNVIPLPPPPYTAEKQSIKDPKKHRQQPSSPGGRLANF 120

Query: 121 LNSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS-NSSKISGFRTP 180
           LNSLFNQS SKKKKKPKN IK EDLHHE+G +KRRSSLSTLID+KSSS NSSK+SGFRTP
Sbjct: 121 LNSLFNQSGSKKKKKPKNSIKTEDLHHEIGARKRRSSLSTLIDTKSSSNNSSKVSGFRTP 180

Query: 181 PAPHCCTVQTPNKNYKEIRSFLNQKRAAN----SKNLGNGINQKSEMRKINDPDEGAESD 240
           PAP+CC+VQTP+K Y EIRSFL+QKR  N      N GNGIN+KSEMRK+ND DEG ESD
Sbjct: 181 PAPNCCSVQTPSKKYMEIRSFLDQKREGNYYSKKNNRGNGINEKSEMRKMNDEDEGDESD 240

Query: 241 SSSDLFELRIYDKFDCYSSTELPVYQTTNIQTINKL 271
           SSSDLFELRI D+FDCYSS ELPVY+TTN QTINKL
Sbjct: 241 SSSDLFELRICDRFDCYSSNELPVYRTTNFQTINKL 267

[Close]

BLAST of ClCG05G023610 vs. NCBI nr
Match: XP_011655719.1 (protein BIG GRAIN 1-like E [Cucumis sativus] >KGN51989.1 hypothetical protein Csa_007727 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-107
Identity = 216/273 (79.12%), Postives = 235/273 (86.08%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYNAASVGYDTSLFSQK 60
           MSVT HLSG+PDK+FRKSLHRRKDSGELDVFEAA YF+GSNE  Y  A+  Y+TSLF   
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAAT-YETSLF--- 60

Query: 61  IFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANFL 120
                HGGRRGGRMSLDLP+R+NVIPLP P YTAEKQ++KD KK RQQPSSPGGRLANFL
Sbjct: 61  -----HGGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLANFL 120

Query: 121 NSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS-NSSKISGFRTPP 180
           NSLFNQS+SKKKKKPKN IK EDLHHEMG +KRRSSLSTLID+KSSS +SSKISGFRTPP
Sbjct: 121 NSLFNQSASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSSHSSSKISGFRTPP 180

Query: 181 APHCCTVQTPNKNYKEIRSFLNQKR-AANSKNLGNGI-NQKSEMRKINDPDEGAESDSSS 240
           AP+CCTVQTPNKNY EIRSFL+QKR   N  +  NGI NQKSEMRK+ND DEG ESDSSS
Sbjct: 181 APNCCTVQTPNKNYMEIRSFLDQKREGINYYSKKNGINNQKSEMRKMNDQDEGDESDSSS 240

Query: 241 DLFELRIYDKFDCYSSTELPVYQTTNIQTINKL 271
           DLFELRI D+FDCYSS ELPVY+TTN QTINKL
Sbjct: 241 DLFELRICDRFDCYSSNELPVYRTTNFQTINKL 264

[Close]

BLAST of ClCG05G023610 vs. NCBI nr
Match: XP_022956957.1 (protein BIG GRAIN 1-like E [Cucurbita moschata])

HSP 1 Score: 365.9 bits (938), Expect = 2.9e-97
Identity = 208/275 (75.64%), Postives = 232/275 (84.36%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYN--AASVGYDTSLFS 60
           MSVT  LSG P+K+F KSLHRRKDSGELDVFEAA YFSG NEL YN  AA+  YDTSLFS
Sbjct: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLFS 60

Query: 61  QKIFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLAN 120
           QKIFRED GG RGGRMSLDLPIR+N++PLP P    EKQT KDQKK RQQPSSPGGRLAN
Sbjct: 61  QKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLAN 120

Query: 121 FLNSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS--NSSKISGFR 180
           FLNSLFNQS+SKKKKKPKNPIK+EDL HE GG+KRRSSLSTLIDSKSSS  +SS ISGFR
Sbjct: 121 FLNSLFNQSASKKKKKPKNPIKSEDL-HENGGRKRRSSLSTLIDSKSSSIYSSSNISGFR 180

Query: 181 TPPAPHCCTVQTPNKNYKEIRSFLNQKRAANSKNLGNGINQKS--EMRKINDPDEGAESD 240
           TPPAP+ CTVQTPNKNYKEIRS L+QKR  +SKNLG+G ++++  ++RK+N  DEGAESD
Sbjct: 181 TPPAPN-CTVQTPNKNYKEIRSLLDQKR-TSSKNLGSGYHKQNQYDIRKMNGVDEGAESD 240

Query: 241 SSSDLFELRIYDKFDCYSSTELPVYQTTNIQTINK 270
           SSSDLFELRI     C S   LPVY++TNIQTIN+
Sbjct: 241 SSSDLFELRI-----CDSDCGLPVYESTNIQTINR 263

[Close]

BLAST of ClCG05G023610 vs. NCBI nr
Match: KAG6601482.1 (Protein BIG GRAIN 1-like E, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-96
Identity = 207/275 (75.27%), Postives = 231/275 (84.00%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYN--AASVGYDTSLFS 60
           MSVT  LSG P+K+F KSLHRRKDSGELDVFEAA YFSG NEL YN  AA+  YD SLFS
Sbjct: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDASLFS 60

Query: 61  QKIFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLAN 120
           QKIFRED GG RGGRMSLDLPIR+N++PLP P    EKQT KDQKK RQQPSSPGGRLAN
Sbjct: 61  QKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLAN 120

Query: 121 FLNSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS--NSSKISGFR 180
           FLNSLFNQS+SKKKKKPKNPIK+EDL HE GG+KRRSSLSTLIDSKSSS  +SS ISGFR
Sbjct: 121 FLNSLFNQSASKKKKKPKNPIKSEDL-HENGGRKRRSSLSTLIDSKSSSIYSSSNISGFR 180

Query: 181 TPPAPHCCTVQTPNKNYKEIRSFLNQKRAANSKNLGNGINQKS--EMRKINDPDEGAESD 240
           TPPAP+ CTVQTPNKNYKEIRS L+QKR  +SKNLG+G ++++  ++RK+N  DEGAESD
Sbjct: 181 TPPAPN-CTVQTPNKNYKEIRSLLDQKR-TSSKNLGSGYHKQNQYDIRKMNGVDEGAESD 240

Query: 241 SSSDLFELRIYDKFDCYSSTELPVYQTTNIQTINK 270
           SSSDLFELRI     C S   LPVY++TNIQTIN+
Sbjct: 241 SSSDLFELRI-----CDSDCGLPVYESTNIQTINR 263

[Close]

BLAST of ClCG05G023610 vs. ExPASy Swiss-Prot
Match: Q93Z37 (Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana OX=3702 GN=At1g69160 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.3e-26
Identity = 119/332 (35.84%), Postives = 162/332 (48.80%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRK-SLHRRKDSGELDVFEAAGYFSGSNELQYNAASVG--YDTSLF 60
           MS+ G  S   DKL R+ SL  +++S ELDVFEAA YF       YN AS G    T  +
Sbjct: 1   MSMKGISSAESDKLSRRISLTHKRNSEELDVFEAAVYFG------YNEASSGDHGHTQKY 60

Query: 61  SQKIFREDHGGR-----RGGRMSLDLPIR--SNVIPLPPPAYTA-EKQTIKDQ--KKLRQ 120
                RE++  R      G R+SLDLPIR    V  L    +   E  TIK++      +
Sbjct: 61  GYNAAREENPRRWGILGGGRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHK 120

Query: 121 QPSSPGGRLANFLNSLFNQSSSKK---KKKPKNPIKNEDLHHEMGG-----KKRRSSLST 180
           QPSSPGG++A+FLNSLF+Q+ SKK   K K K    + ++  E+ G     ++RRSS+S 
Sbjct: 121 QPSSPGGKIASFLNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISH 180

Query: 181 LIDSKSSSN---------------SSKISGFRTPPAPHCCTVQTPNKNYKEIRSFLNQKR 240
              S  S++               SS  SGFRTPP P+   + TP KNYK+  ++ +  +
Sbjct: 181 FFSSSRSTSTTTTTTASSSSKSLISSSSSGFRTPP-PY---LNTPTKNYKQFLNYTSATK 240

Query: 241 AANSKNLGNG------------INQKSEMRKI---------------NDPDEGAESDSSS 270
               +                 +   SE ++I                  D+G ESDSSS
Sbjct: 241 QVGEEETKTNKEYSWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKREGEDDGMESDSSS 300

[Close]

BLAST of ClCG05G023610 vs. ExPASy TrEMBL
Match: A0A5D3CB02 (Protein BIG GRAIN 1-like E OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00190 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108
Identity = 215/276 (77.90%), Postives = 235/276 (85.14%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNE-LQYNAASVGYDTSLFSQ 60
           MSVT HLSG+P+K+FRKSLHRRKDS ELDVFEAA YFSGSNE   YN A+  Y+TSLF  
Sbjct: 1   MSVTSHLSGHPNKIFRKSLHRRKDSDELDVFEAASYFSGSNEPCNYNTATT-YETSLF-- 60

Query: 61  KIFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANF 120
                 HGGRRGGRMSLDLP+R+NVIPLPPP YTAEKQ+IKD KK RQQPSSPGGRLANF
Sbjct: 61  ------HGGRRGGRMSLDLPLRTNVIPLPPPPYTAEKQSIKDPKKHRQQPSSPGGRLANF 120

Query: 121 LNSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS-NSSKISGFRTP 180
           LNSLFNQS SKKKKKPKN IK EDLHHE+G +KRRSSLSTLID+KSSS NSSK+SGFRTP
Sbjct: 121 LNSLFNQSGSKKKKKPKNSIKTEDLHHEIGARKRRSSLSTLIDTKSSSNNSSKVSGFRTP 180

Query: 181 PAPHCCTVQTPNKNYKEIRSFLNQKRAAN----SKNLGNGINQKSEMRKINDPDEGAESD 240
           PAP+CC+VQTP+K Y EIRSFL+QKR  N      N GNGIN+KSEMRK+ND DEG ESD
Sbjct: 181 PAPNCCSVQTPSKKYMEIRSFLDQKREGNYYSKKNNRGNGINEKSEMRKMNDEDEGDESD 240

Query: 241 SSSDLFELRIYDKFDCYSSTELPVYQTTNIQTINKL 271
           SSSDLFELRI D+FDCYSS ELPVY+TTN QTINKL
Sbjct: 241 SSSDLFELRICDRFDCYSSNELPVYRTTNFQTINKL 267

[Close]

BLAST of ClCG05G023610 vs. ExPASy TrEMBL
Match: A0A1S4DWX1 (protein BIG GRAIN 1-like E OS=Cucumis melo OX=3656 GN=LOC107990779 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108
Identity = 215/276 (77.90%), Postives = 235/276 (85.14%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNE-LQYNAASVGYDTSLFSQ 60
           MSVT HLSG+P+K+FRKSLHRRKDS ELDVFEAA YFSGSNE   YN A+  Y+TSLF  
Sbjct: 1   MSVTSHLSGHPNKIFRKSLHRRKDSDELDVFEAASYFSGSNEPCNYNTATT-YETSLF-- 60

Query: 61  KIFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANF 120
                 HGGRRGGRMSLDLP+R+NVIPLPPP YTAEKQ+IKD KK RQQPSSPGGRLANF
Sbjct: 61  ------HGGRRGGRMSLDLPLRTNVIPLPPPPYTAEKQSIKDPKKHRQQPSSPGGRLANF 120

Query: 121 LNSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS-NSSKISGFRTP 180
           LNSLFNQS SKKKKKPKN IK EDLHHE+G +KRRSSLSTLID+KSSS NSSK+SGFRTP
Sbjct: 121 LNSLFNQSGSKKKKKPKNSIKTEDLHHEIGARKRRSSLSTLIDTKSSSNNSSKVSGFRTP 180

Query: 181 PAPHCCTVQTPNKNYKEIRSFLNQKRAAN----SKNLGNGINQKSEMRKINDPDEGAESD 240
           PAP+CC+VQTP+K Y EIRSFL+QKR  N      N GNGIN+KSEMRK+ND DEG ESD
Sbjct: 181 PAPNCCSVQTPSKKYMEIRSFLDQKREGNYYSKKNNRGNGINEKSEMRKMNDEDEGDESD 240

Query: 241 SSSDLFELRIYDKFDCYSSTELPVYQTTNIQTINKL 271
           SSSDLFELRI D+FDCYSS ELPVY+TTN QTINKL
Sbjct: 241 SSSDLFELRICDRFDCYSSNELPVYRTTNFQTINKL 267

[Close]

BLAST of ClCG05G023610 vs. ExPASy TrEMBL
Match: A0A0A0KSX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606790 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 5.2e-108
Identity = 216/273 (79.12%), Postives = 235/273 (86.08%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYNAASVGYDTSLFSQK 60
           MSVT HLSG+PDK+FRKSLHRRKDSGELDVFEAA YF+GSNE  Y  A+  Y+TSLF   
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAAT-YETSLF--- 60

Query: 61  IFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANFL 120
                HGGRRGGRMSLDLP+R+NVIPLP P YTAEKQ++KD KK RQQPSSPGGRLANFL
Sbjct: 61  -----HGGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLANFL 120

Query: 121 NSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS-NSSKISGFRTPP 180
           NSLFNQS+SKKKKKPKN IK EDLHHEMG +KRRSSLSTLID+KSSS +SSKISGFRTPP
Sbjct: 121 NSLFNQSASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSSHSSSKISGFRTPP 180

Query: 181 APHCCTVQTPNKNYKEIRSFLNQKR-AANSKNLGNGI-NQKSEMRKINDPDEGAESDSSS 240
           AP+CCTVQTPNKNY EIRSFL+QKR   N  +  NGI NQKSEMRK+ND DEG ESDSSS
Sbjct: 181 APNCCTVQTPNKNYMEIRSFLDQKREGINYYSKKNGINNQKSEMRKMNDQDEGDESDSSS 240

Query: 241 DLFELRIYDKFDCYSSTELPVYQTTNIQTINKL 271
           DLFELRI D+FDCYSS ELPVY+TTN QTINKL
Sbjct: 241 DLFELRICDRFDCYSSNELPVYRTTNFQTINKL 264

[Close]

BLAST of ClCG05G023610 vs. ExPASy TrEMBL
Match: A0A6J1GXU5 (protein BIG GRAIN 1-like E OS=Cucurbita moschata OX=3662 GN=LOC111458485 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.4e-97
Identity = 208/275 (75.64%), Postives = 232/275 (84.36%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYN--AASVGYDTSLFS 60
           MSVT  LSG P+K+F KSLHRRKDSGELDVFEAA YFSG NEL YN  AA+  YDTSLFS
Sbjct: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLFS 60

Query: 61  QKIFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLAN 120
           QKIFRED GG RGGRMSLDLPIR+N++PLP P    EKQT KDQKK RQQPSSPGGRLAN
Sbjct: 61  QKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLAN 120

Query: 121 FLNSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS--NSSKISGFR 180
           FLNSLFNQS+SKKKKKPKNPIK+EDL HE GG+KRRSSLSTLIDSKSSS  +SS ISGFR
Sbjct: 121 FLNSLFNQSASKKKKKPKNPIKSEDL-HENGGRKRRSSLSTLIDSKSSSIYSSSNISGFR 180

Query: 181 TPPAPHCCTVQTPNKNYKEIRSFLNQKRAANSKNLGNGINQKS--EMRKINDPDEGAESD 240
           TPPAP+ CTVQTPNKNYKEIRS L+QKR  +SKNLG+G ++++  ++RK+N  DEGAESD
Sbjct: 181 TPPAPN-CTVQTPNKNYKEIRSLLDQKR-TSSKNLGSGYHKQNQYDIRKMNGVDEGAESD 240

Query: 241 SSSDLFELRIYDKFDCYSSTELPVYQTTNIQTINK 270
           SSSDLFELRI     C S   LPVY++TNIQTIN+
Sbjct: 241 SSSDLFELRI-----CDSDCGLPVYESTNIQTINR 263

[Close]

BLAST of ClCG05G023610 vs. ExPASy TrEMBL
Match: A0A6J1IMQ2 (protein BIG GRAIN 1-like E OS=Cucurbita maxima OX=3661 GN=LOC111478430 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 9.2e-97
Identity = 207/273 (75.82%), Postives = 229/273 (83.88%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRKSLHRRKDSGELDVFEAAGYFSGSNELQYNAASVGYDTSLFSQK 60
           MSVT  LSG P+K+F KSLHRRKDSGELDVFEAA YFSG NEL YNAA+  YDTSLFSQK
Sbjct: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGCNELHYNAAA-SYDTSLFSQK 60

Query: 61  IFREDHGGRRGGRMSLDLPIRSNVIPLPPPAYTAEKQTIKDQKKLRQQPSSPGGRLANFL 120
           IFRED GG RGGRMSLDLPIR+N++PLP P    EKQT KDQKK RQQPSSPGGRLANFL
Sbjct: 61  IFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLANFL 120

Query: 121 NSLFNQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLSTLIDSKSSS--NSSKISGFRTP 180
           NSLFNQS+SKKKKKPK PIK EDL HE GG+KRRSSLSTLIDSKSSS  +SS ISGFRTP
Sbjct: 121 NSLFNQSASKKKKKPKTPIKTEDL-HENGGRKRRSSLSTLIDSKSSSIYSSSNISGFRTP 180

Query: 181 PAPHCCTVQTPNKNYKEIRSFLNQKRAANSKNLGNGINQKS--EMRKINDPDEGAESDSS 240
           PAP+ CTVQTPNKNYKEIRS L++KR  +SKNLG G ++++  ++RK+N  DEGAESDSS
Sbjct: 181 PAPN-CTVQTPNKNYKEIRSLLDKKR-TSSKNLGTGYHKQNPYDIRKMNGVDEGAESDSS 240

Query: 241 SDLFELRIYDKFDCYSSTELPVYQTTNIQTINK 270
           SDLFELRI     C S   LPVY++TNIQTINK
Sbjct: 241 SDLFELRI-----CDSDCGLPVYESTNIQTINK 260

[Close]

BLAST of ClCG05G023610 vs. TAIR 10
Match: AT1G69160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits to 172 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-27
Identity = 119/332 (35.84%), Postives = 162/332 (48.80%), Query Frame = 0


Query: 1   MSVTGHLSGNPDKLFRK-SLHRRKDSGELDVFEAAGYFSGSNELQYNAASVG--YDTSLF 60
           MS+ G  S   DKL R+ SL  +++S ELDVFEAA YF       YN AS G    T  +
Sbjct: 1   MSMKGISSAESDKLSRRISLTHKRNSEELDVFEAAVYFG------YNEASSGDHGHTQKY 60

Query: 61  SQKIFREDHGGR-----RGGRMSLDLPIR--SNVIPLPPPAYTA-EKQTIKDQ--KKLRQ 120
                RE++  R      G R+SLDLPIR    V  L    +   E  TIK++      +
Sbjct: 61  GYNAAREENPRRWGILGGGRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHK 120

Query: 121 QPSSPGGRLANFLNSLFNQSSSKK---KKKPKNPIKNEDLHHEMGG-----KKRRSSLST 180
           QPSSPGG++A+FLNSLF+Q+ SKK   K K K    + ++  E+ G     ++RRSS+S 
Sbjct: 121 QPSSPGGKIASFLNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISH 180

Query: 181 LIDSKSSSN---------------SSKISGFRTPPAPHCCTVQTPNKNYKEIRSFLNQKR 240
              S  S++               SS  SGFRTPP P+   + TP KNYK+  ++ +  +
Sbjct: 181 FFSSSRSTSTTTTTTASSSSKSLISSSSSGFRTPP-PY---LNTPTKNYKQFLNYTSATK 240

Query: 241 AANSKNLGNG------------INQKSEMRKI---------------NDPDEGAESDSSS 270
               +                 +   SE ++I                  D+G ESDSSS
Sbjct: 241 QVGEEETKTNKEYSWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKREGEDDGMESDSSS 300

[Close]

BLAST of ClCG05G023610 vs. TAIR 10
Match: AT3G13980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 8.2e-05
Identity = 58/191 (30.37%), Postives = 87/191 (45.55%), Query Frame = 0


Query: 101 DQKKLRQQPSSPGGRLANFLNSLF-NQSSSKKKKKPKNPIKNEDLHHEMGGKKRRSSLST 160
           D KK++ QP SPGGRLA FLNSLF N +++ KK K    +   +  H        SS S 
Sbjct: 161 DLKKVK-QPISPGGRLATFLNSLFTNAATNPKKHKKTTTVAVVEEPHSSSTCSSASSFSR 220

Query: 161 LIDSKSSSNSSKIS-GFRTPPA------------PHCCTVQTPNKNYKEIRSFLNQKRAA 220
              SK+ S+S K     R  P             P+    +    N +  R   +++   
Sbjct: 221 SCLSKTPSSSGKSKRSVRFCPVNVILDEDSSFTMPYAYNNERLYDNNEAKRVEEHRRVIQ 280

Query: 221 NSKNLGNGINQKSEMRKIN------DPDEGAESDSSSDLFELRIYDKFDCYS-STELPVY 271
            +K+L    + K+++   N      D ++ A S +SSDLFEL             ELPVY
Sbjct: 281 AAKDLLRTYHNKNKVTTTNINNVEEDDEDDAASCASSDLFELENLSAIGIERYREELPVY 340

[Close]

BLAST of ClCG05G023610 vs. TAIR 10
Match: AT5G12050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 6.9e-04
Identity = 56/214 (26.17%), Postives = 90/214 (42.06%), Query Frame = 0


Query: 93  TAEKQTIKD--QKKLRQQPSSPGGRLANFLNSLFNQSSSKK---KKKPKNPIKNEDLHHE 152
           T  ++++K    +K  + P+SPGGR+ NFLNSLF+ +S +    K  P+    ++  +  
Sbjct: 143 TRNRRSVKSSGNQKKPKTPASPGGRIVNFLNSLFSNNSKQSNAVKSYPRKTSYDDSAYVR 202

Query: 153 MGGKKRRSSLSTLIDSKSSSNSSKISGFRTPPAPHCCTVQTPNKNYKEIRSFLNQK---- 212
                  SS +T   + S S S    G+         +V+    N     SF +++    
Sbjct: 203 KTSNDYHSSTTTCSSASSFSRSCMNKGYEKSSGRIKRSVRFSPVNVIVPESFTSKEEDYF 262

Query: 213 -----RAANSKNLGNG-----------------INQKSEMRKIN-----------DPDEG 263
                R +  KN+ +G                  N ++ + K N           D D+ 
Sbjct: 263 SNGNARKSVKKNVEDGGRRSVEEIAREFLRDYHKNHENSLVKTNGFEDYEDDDEDDDDDD 322

The following BLAST results are available for this feature:

BLAST of ClCG05G023610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892897.1	1.2e-127	89.74	protein BIG GRAIN 1-like E [Benincasa hispida]	[more]
XP_016900220.1	2.8e-108	77.90	PREDICTED: protein BIG GRAIN 1-like E [Cucumis melo] >KAA0034479.1 protein BIG G...	[more]
XP_011655719.1	1.1e-107	79.12	protein BIG GRAIN 1-like E [Cucumis sativus] >KGN51989.1 hypothetical protein Cs...	[more]
XP_022956957.1	2.9e-97	75.64	protein BIG GRAIN 1-like E [Cucurbita moschata]	[more]
KAG6601482.1	1.1e-96	75.27	Protein BIG GRAIN 1-like E, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of ClCG05G023610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z37	6.3e-26	35.84	Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana OX=3702 GN=At1g69160 PE=2 SV=...	[more]

BLAST of ClCG05G023610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CB02	1.4e-108	77.90	Protein BIG GRAIN 1-like E OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S4DWX1	1.4e-108	77.90	protein BIG GRAIN 1-like E OS=Cucumis melo OX=3656 GN=LOC107990779 PE=3 SV=1	[more]
A0A0A0KSX8	5.2e-108	79.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606790 PE=3 SV=1	[more]
A0A6J1GXU5	1.4e-97	75.64	protein BIG GRAIN 1-like E OS=Cucurbita moschata OX=3662 GN=LOC111458485 PE=3 SV...	[more]
A0A6J1IMQ2	9.2e-97	75.82	protein BIG GRAIN 1-like E OS=Cucurbita maxima OX=3661 GN=LOC111478430 PE=3 SV=1	[more]

BLAST of ClCG05G023610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69160.1	4.5e-27	35.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G13980.1	8.2e-05	30.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G12050.1	6.9e-04	26.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..236
None	No IPR available	PANTHER	PTHR33541:SF11	PROTEIN BIG GRAIN 1-LIKE E	coord: 218..269
None	No IPR available	PANTHER	PTHR33541:SF11	PROTEIN BIG GRAIN 1-LIKE E	coord: 1..209
IPR039621	Protein BIG GRAIN 1-like	PANTHER	PTHR33541	PROTEIN BIG GRAIN 1-LIKE A-RELATED	coord: 218..269
IPR039621	Protein BIG GRAIN 1-like	PANTHER	PTHR33541	PROTEIN BIG GRAIN 1-LIKE A-RELATED	coord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G023610.1	ClCG05G023610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005886	plasma membrane