ClCG05G021910 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGTAAACCGATATGTCGTTTTTAGTCATTCATTTCTTCACTGTCGTCGTCCTCTTCGCCTTCGAACTCCTCCTTCTCCACTTCTCTCATCTGCTCTGCGCTCGACCTCCTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAAAAGGTAATTCTCTGAACCTCTCTCTTTTTATTCCTCCATCTCCGCTCATTTTTACAAGTATTCATCCATGCGCGTCGTTCCGAAATCGGTATGTGCAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCTCAGGTAATTCGATAATTCGATGATTCTTTTTTTCCCCTCCATATCCGGAAGTTTGAGGTACAAGCAGCATAACTTTGAGCTCTGAAATAATGATGAATTAGTGCTTTAATTTACTATTACATTGCCTGCTTTAGGGCTTCATTTGTTCAATTGTCGCGTGTTAGGTTTTATGAAGAGTTTATTCGATCAGATGTATTCGTTAAGTCTGAAATTTTAGCATTGAAGCATAATTAAGTGGCACGGAAATAATGTATAATCTTCTACGTATTTTCTTGAGCGTTTTATATGTTTAGCCATTACGAGTTTATTCGTTCTGTTATGTTCATTAGGGCGGCGTGGACGAGGGTGAAGATCCAAGAAGCGCAGCCATAAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTATTATTTCATTGATATATTCGGCTGTCTTTTCTAGGATATGCATATTCTTCTCTTAGGTTTTCATGAATCAAGTCCTTCTCATAATCGTTAAAACTGAAATTCTCTTTTAGGAGCAAAGATGATTAGGTTTTTGCTGTCCAAATGAAATTAGATCTCAACAGCATCTAGTTTCTAAAAAGTTGCAGTTAATATGGTGCCGTACGAAAGAAAGTCCATAATTGATCACTATTGTATCGACTGAGCTCTTTGAGTTATTATATTTGAGTTGGTTTAGGGTGTATTTAATGCTTTTCTTGTTCTCAACGTTACCGTTAAAATTCTAACCATCTATTTTATGATTAATGGAATTGGTTTATTGCAACTGAATTGTATCTTACCTTTTCTCACTGACTAACTATTTGTGCTGGCTTTCATGCGCATACACATCAAGTAAGGTTAGCTCATTAGACCATTATTTGGTTTTATAACATTTGATACAAAAAACAATTTGAATATTATTGCTAGAGCTAGAGGGTCACCTTGATTTGAATTCAGATTCTAAAGAGAGATGAGTTTAAAGCATGCCTCTAATTACTGTGCCAATCCATTGTAACCCATTGTGGGCATAATTTTCTTTAATCTCTGGAGATGGAGGAAGAACATTCAACTTTAACAGTGGTCTTATCAGCCCATTGACTTGGTTATTTAACATTTATCTACCGATATGGCTTGTTTCTTCTATGACCCTCTGTAGTATGATTGCTGAACTATAGGTTATGCAGTATTAGTAGTTTTAATGTGTTCATACTCTGTGGGTTACTGAAGTTGTGAATTCGCCTTATATTTTTTTTTTCTTTCATTTGGGAGTTTTTCCAGAGTTTTAACCTGTGTTTACCTTAATTGGACACATCAGTGAAATGTCTTGAATATTGGTTTCCTAAAGTAGGTACCTTATTGGCTGACTTATGACTTTCCACCACATGTCCGGGAAAAACTTAGACATCAGTGGGGGTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTGAGTTCTTTTTTCTACACATACAGTTTTTATTCCTTTCATATTCTTCAGAGCTAAATCGCACTTGACGTACACTGGTTTACCTAGTTATTATTATCTCAATGCCGATCCCTTTTTCAAAAAAAAAAAATAAATAAACAACCTTTGTGCCAAAACCCTGTTTCCTTATAGTAACCTGGAAAGCCAGTGCCCCATACTGAAGTTACTCACATCGGAGAGCAAATCAACGAATTTTTGTGAGGGTTCTTAGAAATCGTACAAGGGCCAAGACCACTTAGTCGTTCATTTCCTAATGATACATATTTTAGAAAAACAAAATCGACCTCAATGAATTTGTATGGATAATAGTGTTAATATAACTATTGAGTCTTTCTTGGTTTCTCTGTTAGAACTTTTGCAAGTAACTTTTTCTCTTTCATTTTCTTCTTATCCCGCCAAGGCACTATTTCATTTGACTTATCAACTAAATGTTAACGATATTTTTCTATTCTCTCTGCTGCTCTTATCTTATAGCATGTTCAAATGTTTGTGAAATTTTAGGTTTCTGCTGAAGTTGACAGGAAGTGATGAAGAGATCAATCTTTTAGGTGATGGGACTGAGAAAGCCGAGTTTGGTGAATGGTCATGGATGTCACCTGAAGAAGTAGTAGAACGTGTGAGTAGACCACCATTACCTTTTTATTTAATTCAACAATTGTAAGGTGGGAGATCGAACTATTGATACTAGAAATAGTAATTAGTGGAGCTATATACTCAAATTAACAAATAGTCATTTAACTCATCACCAACCAAAACAAGCTGAGAAAATCAATCCAAAAAACGAATATGGATATTCAACTTACATTTACCCTCTATCATGCAGGCTGTAGATTTCAAGAAACCTGTTTACAAGGACGTGCTAACGGTATTCAAACCCCATCTCGAGTAA ATGGCCGTAAACCGATATGTCGTTTTTAGTCATTCATTTCTTCACTGTCGTCGTCCTCTTCGCCTTCGAACTCCTCCTTCTCCACTTCTCTCATCTGCTCTGCGCTCGACCTCCTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAAAAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCTCAGGGCGGCGTGGACGAGGGTGAAGATCCAAGAAGCGCAGCCATAAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACCTTATTGGCTGACTTATGACTTTCCACCACATGTCCGGGAAAAACTTAGACATCAGTGGGGGTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTTTCTGCTGAAGTTGACAGGAAGTGATGAAGAGATCAATCTTTTAGGTGATGGGACTGAGAAAGCCGAGTTTGGTGAATGGTCATGGATGTCACCTGAAGAAGTAGTAGAACGTGCTGTAGATTTCAAGAAACCTGTTTACAAGGACGTGCTAACGGTATTCAAACCCCATCTCGAGTAA ATGGCCGTAAACCGATATGTCGTTTTTAGTCATTCATTTCTTCACTGTCGTCGTCCTCTTCGCCTTCGAACTCCTCCTTCTCCACTTCTCTCATCTGCTCTGCGCTCGACCTCCTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAAAAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCTCAGGGCGGCGTGGACGAGGGTGAAGATCCAAGAAGCGCAGCCATAAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACCTTATTGGCTGACTTATGACTTTCCACCACATGTCCGGGAAAAACTTAGACATCAGTGGGGGTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTTTCTGCTGAAGTTGACAGGAAGTGATGAAGAGATCAATCTTTTAGGTGATGGGACTGAGAAAGCCGAGTTTGGTGAATGGTCATGGATGTCACCTGAAGAAGTAGTAGAACGTGCTGTAGATTTCAAGAAACCTGTTTACAAGGACGTGCTAACGGTATTCAAACCCCATCTCGAGTAA MAVNRYVVFSHSFLHCRRPLRLRTPPSPLLSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQKWFLLKLTGSDEEINLLGDGTEKAEFGEWSWMSPEEVVERAVDFKKPVYKDVLTVFKPHLE Homology
BLAST of ClCG05G021910 vs. NCBI nr
Match: XP_038891804.1 (nudix hydrolase 26, chloroplastic [Benincasa hispida]) HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103 Identity = 187/194 (96.39%), Postives = 188/194 (96.91%), Query Frame = 0
BLAST of ClCG05G021910 vs. NCBI nr
Match: XP_023541253.1 (nudix hydrolase 26, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374.0 bits (959), Expect = 8.0e-100 Identity = 184/201 (91.54%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of ClCG05G021910 vs. NCBI nr
Match: XP_022968345.1 (nudix hydrolase 26, chloroplastic [Cucurbita maxima]) HSP 1 Score: 374.0 bits (959), Expect = 8.0e-100 Identity = 181/201 (90.05%), Postives = 187/201 (93.03%), Query Frame = 0
BLAST of ClCG05G021910 vs. NCBI nr
Match: XP_022945096.1 (nudix hydrolase 26, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 374.0 bits (959), Expect = 8.0e-100 Identity = 184/201 (91.54%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of ClCG05G021910 vs. NCBI nr
Match: KAG6573892.1 (Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99 Identity = 182/201 (90.55%), Postives = 186/201 (92.54%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy Swiss-Prot
Match: Q9CAF2 (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.2e-77 Identity = 131/172 (76.16%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy Swiss-Prot
Match: Q9FNH4 (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.7e-63 Identity = 113/185 (61.08%), Postives = 141/185 (76.22%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy Swiss-Prot
Match: Q9C6Z2 (Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 9.0e-54 Identity = 92/157 (58.60%), Postives = 121/157 (77.07%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy Swiss-Prot
Match: Q3IZC1 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=rppH PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.7e-39 Identity = 82/156 (52.56%), Postives = 102/156 (65.38%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy Swiss-Prot
Match: B9KN59 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) OX=557760 GN=rppH PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.7e-39 Identity = 82/156 (52.56%), Postives = 102/156 (65.38%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy TrEMBL
Match: A0A6J1HWY8 (nudix hydrolase 26, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467610 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.9e-100 Identity = 181/201 (90.05%), Postives = 187/201 (93.03%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy TrEMBL
Match: A0A6J1FZW7 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449436 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.9e-100 Identity = 184/201 (91.54%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy TrEMBL
Match: A0A6J1DAT2 (nudix hydrolase 26, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018605 PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 8.7e-100 Identity = 182/206 (88.35%), Postives = 192/206 (93.20%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy TrEMBL
Match: A0A0A0KRB9 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G613530 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98 Identity = 178/201 (88.56%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of ClCG05G021910 vs. ExPASy TrEMBL
Match: A0A1S3BGM3 (nudix hydrolase 26, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489378 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98 Identity = 179/201 (89.05%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of ClCG05G021910 vs. TAIR 10
Match: AT3G10620.1 (nudix hydrolase homolog 26 ) HSP 1 Score: 290.8 bits (743), Expect = 8.3e-79 Identity = 131/172 (76.16%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of ClCG05G021910 vs. TAIR 10
Match: AT5G06340.1 (nudix hydrolase homolog 27 ) HSP 1 Score: 242.7 bits (618), Expect = 2.6e-64 Identity = 113/185 (61.08%), Postives = 141/185 (76.22%), Query Frame = 0
BLAST of ClCG05G021910 vs. TAIR 10
Match: AT1G30110.1 (nudix hydrolase homolog 25 ) HSP 1 Score: 211.5 bits (537), Expect = 6.4e-55 Identity = 92/157 (58.60%), Postives = 121/157 (77.07%), Query Frame = 0
BLAST of ClCG05G021910 vs. TAIR 10
Match: AT1G30110.2 (nudix hydrolase homolog 25 ) HSP 1 Score: 211.5 bits (537), Expect = 6.4e-55 Identity = 92/157 (58.60%), Postives = 121/157 (77.07%), Query Frame = 0
BLAST of ClCG05G021910 vs. TAIR 10
Match: AT4G25434.2 (nudix hydrolase homolog 10 ) HSP 1 Score: 45.4 bits (106), Expect = 6.1e-05 Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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