ClCG05G020840 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G020840
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	ATP synthase subunit d, mitochondrial
Location	CG_Chr05: 32858010 .. 32860567 (+)
RNA-Seq Expression	ClCG05G020840
Synteny	ClCG05G020840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCGATATCTCTGTTTTGAGCTCTCAACGAATTGCCCTCTCACACATCCCATTGATTCTCTTCTTCTTTCCTCCGCCAAATCGAGAGATAACAACAAGAAAATGAGCGGCACCGTTAAGAAAGTGGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCGTCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTTAGCCAGGTCTGGAAGATTCCAATTTCTCCCCCTTTTTTCTTTTGTTATTTTCACGGTTGCTAGATCTCTCCCTTTTTGTTTGGTTTTGTTGATGTGGGTTGATTTTGTTTGGCTTGAATGTTTCGAGATTGTTCTTATTTTAATTGTGCTTTTCAGGAATTTTTATAGTTGTGTTTAATTTGGTCTTCATTTCGTGCAAATCCGGTGTGATTTTATTCTTATTCGATATATCAATAACTGAGAATCGCAATGTTTCGTTTCTCGTGGGTCATAGAGAGGTTAATGTTGATTTAGTTGTGGTCTGTCTGACTGAGGAAGATCGTTCATAGTAGAATTGGAATTTAGGAAACAAAAATCTTTCTCGTTGTAAAGGAAACATTTCGTACTTGTTTGGATCCAGAAACTGCTATATGCATCAGATGATAAGAACAGGTGATAATTCATTATTGCAGCAATCCTAATGTCTCAGGTAAATTTAGATGAGCAATGTCTTATCTTATATGAAAATGGCAAATCATAACTATTGGTATCAGACATGGATTATTTACTGTCTATTGCATATAGTTCAAGCGCAAATGGGAGTGTTGGAATATGGCCCAAATAGTAAGATGTCAGCACTTCTCTTATGAGTTATAGGTTTTAATCACTCCTTCGTGTGTGTGTGTGTTTTTCCTTTAAAAAAAAAGTGCCACTGGAAGCTAAATTGATTGCTCATAAAGATGATTCTGTTAATTTTGTGCTTTTCCTTTCTATCAGTCAGCAAGTTGATCGTATTTATGACAATTTGTGAAAATTGCTGCCTTACGGACTTTGGTCAAAACTTTCAAGACTTGCATTATTATAAACTGTTTATCTCTGTGTAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACGGTATGCTCTCTGATTCACTTGTCATTTGAAGTTTATACTTCGATTTTTCTGTGCAATATTTAGACTAGGCAATATTGTGATTTTCTTAGCACAAGTTTGTCTGTGAATTCCAACGCTTCTCTAATTCGAGTCTTCAAAGATAACTTTTCTTGGTTGGGCAGTCTTCGGGGTCAATGATCATATACATACATTATTAATTTGAGATTTTTGTATTTAGACAGCTAGGGCACATCAGTGATTCAATCACCAAAACGTTTAAGTGGCCCTTTTAGCTCAGTGGATGTCACACTACCCTATTGCTGAAATCCTCTGATTGAAGTATTTACAACAATTGTCTTTTATTGGATCACATATCACATTTTATCGGGTATAATAGAGCCTAAATTTTTTCGTTACTCTTGTTCTAATAGGCCAAAATTTTTGTTGTCACAATGTAATTTGCTTGAATTTAGCTTTTCTTCTCCCACATCTCCCACGTATAGCATGGGACCTCAGACATTGTCAGCAATATATCAGGACAGATTAACCATGGTTTTGCATTGACATTAAAGTAGAAACCAATGCCTTTATGATTTGTTTACTTTCTTATTCATTACAATTCGGTTGACCTGCTTCCTTTTTAGGCATTGAGATCCCCAAATTCGTAGACACAGTGACTCCACAGTACAAACCTAAATTTGATGCATTGGTAAGCACCAGTTATATTTCAGTAGATCTGTGTTGTTTCTCTCTGCTGGTAGGTGCTTCATTTATTGTTTATGTGGCAGCTGGTAGAATTGAAGGAAGCTGAAGAAAAGTCTCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGGTAATGGAAAAGAAAGGATAATTTGATTTCCAATTTTGTAGAAACAAATTCTCACAGCCTGTTATATTCTCGTCAGAAAAAGATCAGCACCATGACTGCTGATGAATACTTTGAGAAGCATCCTGAGTTGAGGAAGAAATTCGATGATGAAATCCGAAACGACTACTGGGGCTATTGACTGGAAATTAAAGTTCAAGCACCAAAGTTTCAGAATTTAATTTCATAAACCTCCCGGGACTTGTTTTGCTGCAGATGTTTGGTCAGTAATAAAACAAACCAGATAGTTCCTCTGAAATTTGGTTGCATTTGCTTTTGGGATTATGGTAACGAAATTGATTAGGGAAACTGAGTTTTTCCTTGAAATGATGTTGTGAGAGTTCCAAATAACTCTTAAGGTTACATTATCATGGAAAATGCATTTTTTTTTAACGAGCTTATTCTGGCTTTCTTATCCTTCCAAGATCAATAAAGAGATGTTACAAGCTTTAAATT

mRNA sequence

CGCCGATATCTCTGTTTTGAGCTCTCAACGAATTGCCCTCTCACACATCCCATTGATTCTCTTCTTCTTTCCTCCGCCAAATCGAGAGATAACAACAAGAAAATGAGCGGCACCGTTAAGAAAGTGGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCGTCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTTAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACGGCATTGAGATCCCCAAATTCGTAGACACAGTGACTCCACAGTACAAACCTAAATTTGATGCATTGCTGGTAGAATTGAAGGAAGCTGAAGAAAAGTCTCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAATACTTTGAGAAGCATCCTGAGTTGAGGAAGAAATTCGATGATGAAATCCGAAACGACTACTGGGGCTATTGACTGGAAATTAAAGTTCAAGCACCAAAGTTTCAGAATTTAATTTCATAAACCTCCCGGGACTTGTTTTGCTGCAGATGTTTGGTCAGTAATAAAACAAACCAGATAGTTCCTCTGAAATTTGGTTGCATTTGCTTTTGGGATTATGGTAACGAAATTGATTAGGGAAACTGAGTTTTTCCTTGAAATGATGTTGTGAGAGTTCCAAATAACTCTTAAGGTTACATTATCATGGAAAATGCATTTTTTTTTAACGAGCTTATTCTGGCTTTCTTATCCTTCCAAGATCAATAAAGAGATGTTACAAGCTTTAAATT

Coding sequence (CDS)

ATGAGCGGCACCGTTAAGAAAGTGGCCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCGTCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTTAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACGGCATTGAGATCCCCAAATTCGTAGACACAGTGACTCCACAGTACAAACCTAAATTTGATGCATTGCTGGTAGAATTGAAGGAAGCTGAAGAAAAGTCTCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAATACTTTGAGAAGCATCCTGAGTTGAGGAAGAAATTCGATGATGAAATCCGAAACGACTACTGGGGCTATTGA

Protein sequence

MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Homology

[Close]

BLAST of ClCG05G020840 vs. NCBI nr
Match: XP_023541261.1 (ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. NCBI nr
Match: XP_022139222.1 (ATP synthase subunit d, mitochondrial [Momordica charantia])

HSP 1 Score: 320.5 bits (820), Expect = 8.8e-84
Identity = 161/168 (95.83%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPE
Sbjct: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. NCBI nr
Match: XP_004142418.1 (ATP synthase subunit d, mitochondrial [Cucumis sativus] >KGN52290.1 hypothetical protein Csa_007810 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 162/168 (96.43%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGT+KKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1   MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. NCBI nr
Match: XP_022966719.1 (ATP synthase subunit d, mitochondrial [Cucurbita maxima])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. NCBI nr
Match: XP_038893313.1 (ATP synthase subunit d, mitochondrial [Benincasa hispida])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGT+KKV +VAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE
Sbjct: 1   MSGTIKKVTNVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYKPKFDALLVELKEAE+KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYKPKFDALLVELKEAEQKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIVEVQEMKKKISTMTADEYF KHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQEMKKKISTMTADEYFVKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. ExPASy Swiss-Prot
Match: Q9FT52 (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-75
Identity = 139/168 (82.74%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YKPKFDALLVELKEAE+KSLKE
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168

[Close]

BLAST of ClCG05G020840 vs. ExPASy TrEMBL
Match: A0A6J1CDD8 (ATP synthase subunit d, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010189 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 161/168 (95.83%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPE
Sbjct: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. ExPASy TrEMBL
Match: A0A6J1HUL8 (ATP synthase subunit d, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466347 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.3e-84
Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. ExPASy TrEMBL
Match: A0A0A0KRL4 (ATP synthase subunit d, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G623540 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.3e-84
Identity = 162/168 (96.43%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGT+KKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1   MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. ExPASy TrEMBL
Match: A0A6J1G072 (ATP synthase subunit d, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449482 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.1e-83
Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFD+LLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDSLLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. ExPASy TrEMBL
Match: A0A5D3CDC0 (ATP synthase subunit d, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002870 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.7e-83
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEI EV+EMK+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of ClCG05G020840 vs. TAIR 10
Match: AT3G52300.1 (ATP synthase D chain, mitochondrial )

HSP 1 Score: 283.9 bits (725), Expect = 8.5e-77
Identity = 139/168 (82.74%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
           PIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YKPKFDALLVELKEAE+KSLKE
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168

[Close]

BLAST of ClCG05G020840 vs. TAIR 10
Match: AT3G52300.2 (ATP synthase D chain, mitochondrial )

HSP 1 Score: 184.5 bits (467), Expect = 7.0e-47
Identity = 85/108 (78.70%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
           MSG  KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLV 109
           PIDW+YYRKGIG+ +VD YKEAYD IEIPK+VD VTP+YKPKFDAL++
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALVI 108

The following BLAST results are available for this feature:

BLAST of ClCG05G020840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541261.1	6.8e-84	97.02	ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022139222.1	8.8e-84	95.83	ATP synthase subunit d, mitochondrial [Momordica charantia]	[more]
XP_004142418.1	1.5e-83	96.43	ATP synthase subunit d, mitochondrial [Cucumis sativus] >KGN52290.1 hypothetical...	[more]
XP_022966719.1	1.5e-83	96.43	ATP synthase subunit d, mitochondrial [Cucurbita maxima]	[more]
XP_038893313.1	2.0e-83	96.43	ATP synthase subunit d, mitochondrial [Benincasa hispida]	[more]

BLAST of ClCG05G020840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT52	1.2e-75	82.74	ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g523...	[more]

BLAST of ClCG05G020840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDD8	4.3e-84	95.83	ATP synthase subunit d, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1HUL8	7.3e-84	96.43	ATP synthase subunit d, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC11146634...	[more]
A0A0A0KRL4	7.3e-84	96.43	ATP synthase subunit d, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G623540...	[more]
A0A6J1G072	2.1e-83	95.83	ATP synthase subunit d, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449...	[more]
A0A5D3CDC0	4.7e-83	95.83	ATP synthase subunit d, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of ClCG05G020840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52300.1	8.5e-77	82.74	ATP synthase D chain, mitochondrial	[more]
AT3G52300.2	7.0e-47	78.70	ATP synthase D chain, mitochondrial	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..141
None	No IPR available	PANTHER	PTHR12700:SF18	ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL	coord: 1..168
IPR008689	ATP synthase, F0 complex, subunit D, mitochondrial	PFAM	PF05873	Mt_ATP-synt_D	coord: 15..166 e-value: 8.5E-19 score: 67.9
IPR008689	ATP synthase, F0 complex, subunit D, mitochondrial	PIRSF	PIRSF005514	Mitoh_ATP-synt_D	coord: 9..168 e-value: 3.0E-39 score: 132.3
IPR008689	ATP synthase, F0 complex, subunit D, mitochondrial	PANTHER	PTHR12700	ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL	coord: 1..168
IPR036228	ATP synthase, F0 complex, subunit D superfamily, mitochondrial	GENE3D	6.10.280.70		coord: 14..141 e-value: 5.2E-35 score: 122.1
IPR036228	ATP synthase, F0 complex, subunit D superfamily, mitochondrial	SUPERFAMILY	161065	ATP synthase D chain-like	coord: 15..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G020840.1	ClCG05G020840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000274	mitochondrial proton-transporting ATP synthase, stator stalk
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity