ClCG05G016670 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G016670
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein TPR1-like isoform X1
Location	CG_Chr05: 28972228 .. 28975048 (-)
RNA-Seq Expression	ClCG05G016670
Synteny	ClCG05G016670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGATCCCAACCGCGGCTTGCTCTTCCTCATCCTCCAATTCCTCGATCAGCAAAATCTCTCTGAAACTGCTCGCTCGTAAAAATCTAATACATATATATCATATTCTACTTTGTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTAATACTACTTTTTGGTTTTGTTGGTGCCTAGCCTGGAATGCGAAACCGGATTATTCTTCAACATGGGTTATTTTGAAGAGATGTTGAATTGCTGTGCTTATAATGAAGCAGAAAGCTATCTTTGTGGTTTTACTGATATTCATGATAATATTTATTCCACCAAGATCTACTTTGGGATTCGAAAGCTCAAGTTCCTTGAAGCACTCTCTGAGTATGTATACAAAATTATTGATTTTTATTCCTCATTTTCTCTTCTTTTGATTATACTATACTATTTTTATTTTTATTTTTATTTTTCCAAAATTTCAACAATATTATAGAATTTTCAAATTAAAAAATACTCGTATTATTAGTTTTGTAGGATGAAAACAGTTAGTATTTTATTTTTAAAATATTTTTTAATTTTTGAAAATTTCAATAATATACATTAACTAGAGAAAAAAAATATATATCAAAATACTCTTAATATTTTTTAATTTTCAAAAGTTTCAAAATACTCTTATATACACCAAAATATTTGTATTTTTTTTTTTTTTTTTACTTTTGAACTTTTCAATGAATATTAATATCCTCAACTTTTCAAAGAAGAAAGTTTTAAAATTTCTTTTATTGTAAACTTTGAGTTGGGAAAGACATAATTTGAAAACAACTCATGCAGTTACTCTTATTTTGGCCTCCTTTGTTTAAATATTTCACCAATTTTTTTTAGTAATCAAACACAATTTAAAACTTTAAGATAAGGCATAGAATCCTTGAAACTATCCCAAAGTCCCAAAATGAAAATTTCTATTTAAAACTTAGCAAAACGATGAATCGTAAAATACAAAAAAGAGCGACAAACAAATATCATATTTCATCATTGTAAGCCTTTTTAAGTTAATCACAACAAATAAATTAATTTGAATTGCAAAAATGATCAACAAACTCTTTGTCATGACAAGTAACGGAGTATAAAAAAAGATGATGAACATTCAAAAGGGTTAGACCATTAATTGAAGTAGAGTAGAGAGAAACAGAATAGAATATGAGGGTGAAATAGTGTGTAAATTAAAGGCATTAATAGTACTTTTAAAATTACAACGATATATATATATATATTGAAACAAGGTGGTAACAATTTCGTGTAATATATATATATTGAAACAAGGTGGTAACAATTTCCATTCAAATATTAAGTAAGAGTATTTAAAATTTTTTTATTAAAAAATTGAATGATATTAAAGAAACTTTTGAAAGTTGAAGAAATAAAATTTCGAGGTATTTTCTATATTTAAGCTTATTTTTAAAAGAAAAATTTGAATGCAGCGGAGAGCGAGGGATTGCTCGAGAAGTGGTTGAAAACGACATTGAAATTTTCAACCAGTATAACCCAGGGTTGGTCCAGCAAGCTTTTGAGCTACTGCAAATGAGGAACTTTATGCAAGTTTTCAAATTTCGTTTTTTTTATTCTTTCATTAAATTACGAATTTGGTCTACGCATAGTTTAATTTGATAGATTGGAGCTAGTATCAAAATTTTGATTATATTATAAATACTATTACATGAATTTCAAAGTTTGTGTCAATATAGTTTTTAAATTTTCAAAATTATAAATTTAGTCTTTTAATATTATTTTTTTCTTTAATTTCAAGGAACTATAAAACACGAATTAAAAATTTAAGATTCCAAAATTATATTGAATAAATCAATTAATATTGAATTATTATTATTATTATATATTTTTTTTTTTTTGTCTAGTACCACCTGTTATTAGATACAAAATTGAATGTTTTGAGATATATTGGACATTTCTAAAAATTTAAGGACTAATAGGTATAGATTTCAAAATTAATGGAGTAAAACTTATAATTTAATCCAAAAATTTGAAATTAATTTCTATAACTTAATTTGGATGAAGTTTGCAAAGTTTTCCTAAGCCTGTTTTCACTTAACCAAAAACCCACTTAATTTTTCCTATTTTTATTTTGCCCTAAACTCTTAGCACAACTAATTTCTAACACTTTAATGAATAAACATCAAATCGATTTTGAGTTATTAAAAATGTATTTTAGAGTAATTTTTAATATAACAAAAGTGATTTTAATCATTTTTAAAATCCTCCAAAACATGCACTAAAAGCATGTTGTTCAAAGCAATTTTGAATATATCAAAAGTAAATTTAACCATTTCAAAACATGTGAATTTGTTTAGTACTCTCATAAAGTTCAGTATGCCATAACGATCAATACAACTCGGTCGTTAAAACCTATCTTTAAATTTCCATCCATATTTCTTGAAGTAACAGAAATCATAAGACTAAGAGGAACAATTTGACTAAATTATGGAGATCAAATTGAAACTTTGCTAAAATGACCAAATTCGGAAATTCATTTATTATTTTCTTTTTTCTTTTTTCTTTTAATAATCTTTTAGAGATATGATATATTATCGTCACATATAATAAAATGCAGGTCTCACAGGTTGCTTTCGAGTTACAAAAATATGAAAGCAGCAAGAAAAGTTGTGATGGAAAATATCAAGAAATCCGTTGAAGCCAATCCCCTTCTCCAAGGGAAGCTTTCATTTCCGCCACTTCCGACGACGCTGCAGGCCATCTACACGGCGGTGATGGCCGCCAGGGTCAGGCCGCCGCCGCCGACTTGCAGGCGAGATTCCGACGTTTGA

mRNA sequence

ATGGCCACCGATCCCAACCGCGGCTTGCTCTTCCTCATCCTCCAATTCCTCGATCAGCAAAATCTCTCTGAAACTGCTCGCTCCCTGGAATGCGAAACCGGATTATTCTTCAACATGGGTTATTTTGAAGAGATGTTGAATTGCTGTGCTTATAATGAAGCAGAAAGCTATCTTTGTGGTTTTACTGATATTCATGATAATATTTATTCCACCAAGATCTACTTTGGGATTCGAAAGCTCAAGTTCCTTGAAGCACTCTCTGACGGAGAGCGAGGGATTGCTCGAGAAGTGGTTGAAAACGACATTGAAATTTTCAACCAGTATAACCCAGGGTCTCACAGGTTGCTTTCGAGTTACAAAAATATGAAAGCAGCAAGAAAAGTTGTGATGGAAAATATCAAGAAATCCGTTGAAGCCAATCCCCTTCTCCAAGGGAAGCTTTCATTTCCGCCACTTCCGACGACGCTGCAGGCCATCTACACGGCGGTGATGGCCGCCAGGGTCAGGCCGCCGCCGCCGACTTGCAGGCGAGATTCCGACGTTTGA

Coding sequence (CDS)

ATGGCCACCGATCCCAACCGCGGCTTGCTCTTCCTCATCCTCCAATTCCTCGATCAGCAAAATCTCTCTGAAACTGCTCGCTCCCTGGAATGCGAAACCGGATTATTCTTCAACATGGGTTATTTTGAAGAGATGTTGAATTGCTGTGCTTATAATGAAGCAGAAAGCTATCTTTGTGGTTTTACTGATATTCATGATAATATTTATTCCACCAAGATCTACTTTGGGATTCGAAAGCTCAAGTTCCTTGAAGCACTCTCTGACGGAGAGCGAGGGATTGCTCGAGAAGTGGTTGAAAACGACATTGAAATTTTCAACCAGTATAACCCAGGGTCTCACAGGTTGCTTTCGAGTTACAAAAATATGAAAGCAGCAAGAAAAGTTGTGATGGAAAATATCAAGAAATCCGTTGAAGCCAATCCCCTTCTCCAAGGGAAGCTTTCATTTCCGCCACTTCCGACGACGCTGCAGGCCATCTACACGGCGGTGATGGCCGCCAGGGTCAGGCCGCCGCCGCCGACTTGCAGGCGAGATTCCGACGTTTGA

Protein sequence

MATDPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAARVRPPPPTCRRDSDV

Homology

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BLAST of ClCG05G016670 vs. NCBI nr
Match: XP_038896847.1 (protein TPR1-like [Benincasa hispida])

HSP 1 Score: 305.8 bits (782), Expect = 2.4e-79
Identity = 148/177 (83.62%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 4   DPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTD 63
           DP+R LLFLILQFLD QNLSETARSLECETGLFFNM YFEEMLNCCAY+EAE+YLCGFTD
Sbjct: 6   DPDRALLFLILQFLDHQNLSETARSLECETGLFFNMNYFEEMLNCCAYDEAENYLCGFTD 65

Query: 64  IHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSSYKNMK 123
           IHDNIYS KIYF IRKLKFLEAL+DGER IAR+VVEND+EIFNQYNPGSH LLSSYKN+K
Sbjct: 66  IHDNIYSNKIYFEIRKLKFLEALADGEREIARKVVENDLEIFNQYNPGSHMLLSSYKNIK 125

Query: 124 AARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAARVRPPPPTCRRDSD 181
            ARKVV+ENIKK ++ANPLLQGKLSFPPLPTTLQA+YT  MA+R   P   CRRDSD
Sbjct: 126 EARKVVLENIKKCIQANPLLQGKLSFPPLPTTLQAVYTKAMASRAGGPAAACRRDSD 182

[Close]

BLAST of ClCG05G016670 vs. NCBI nr
Match: XP_008452906.1 (PREDICTED: protein TPR1-like isoform X2 [Cucumis melo] >ADN34126.1 hypothetical protein [Cucumis melo subsp. melo] >TYK19976.1 protein TPR1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 1.6e-78
Identity = 154/180 (85.56%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MAT--DPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYL 60
           MAT  DP+R LLFLILQFLD QNLSETARSLECETGLFFNM YFEE+LNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGER +AREVVE DIEIF+QYNPGSH LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAARVRPPPPTCRRD 179
           YKNMK ARKVVMENIKK +EANPLLQGKLSFPPL TTLQA Y   MA+R R  P TCRRD
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGR-APATCRRD 179

[Close]

BLAST of ClCG05G016670 vs. NCBI nr
Match: XP_022139726.1 (protein TPR1-like isoform X2 [Momordica charantia])

HSP 1 Score: 303.1 bits (775), Expect = 1.6e-78
Identity = 147/185 (79.46%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MATDPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCG 60
           MATDP+RG+LFLIL +LDQQNLSETARSLECETGL+FNM YFEEMLNCCAYNEAESYLCG
Sbjct: 1   MATDPDRGILFLILHYLDQQNLSETARSLECETGLYFNMSYFEEMLNCCAYNEAESYLCG 60

Query: 61  FTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSSYK 120
           FTDIHDN+YSTKIYFGIRKLKFLEAL+DGER IAREVVENDIEIF++YNPGSHRLLSSYK
Sbjct: 61  FTDIHDNLYSTKIYFGIRKLKFLEALADGEREIAREVVENDIEIFSEYNPGSHRLLSSYK 120

Query: 121 NMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAAR-----VRPPPPTC 180
           N+K ARKVVM NIK+ + ANPL +GKL+ PPLPTTLQ +YT  MA R        PP TC
Sbjct: 121 NLKEARKVVMANIKRCINANPLFEGKLTLPPLPTTLQRLYTEAMAGRGFFNGREVPPATC 180

[Close]

BLAST of ClCG05G016670 vs. NCBI nr
Match: KAE8649955.1 (hypothetical protein Csa_012980 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 8.6e-77
Identity = 154/195 (78.97%), Postives = 163/195 (83.59%), Query Frame = 0


Query: 1   MAT--DPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYL 60
           MAT  DP+R LLFLILQFLD QNLSETARSLECETGLFFNM YFEE+LNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGER +AREVVE DIEIF+QYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------SHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAV 179
                   SH LLSSY+NMK ARKVVMENIKK +EANPLL+GKLSFPPL TTLQA YT  
Sbjct: 121 LLQMDNFMSHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEA 180

[Close]

BLAST of ClCG05G016670 vs. NCBI nr
Match: XP_022139717.1 (protein TPR1-like isoform X1 [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75
Identity = 147/200 (73.50%), Postives = 163/200 (81.50%), Query Frame = 0


Query: 1   MATDPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCG 60
           MATDP+RG+LFLIL +LDQQNLSETARSLECETGL+FNM YFEEMLNCCAYNEAESYLCG
Sbjct: 1   MATDPDRGILFLILHYLDQQNLSETARSLECETGLYFNMSYFEEMLNCCAYNEAESYLCG 60

Query: 61  FTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPG--------- 120
           FTDIHDN+YSTKIYFGIRKLKFLEAL+DGER IAREVVENDIEIF++YNPG         
Sbjct: 61  FTDIHDNLYSTKIYFGIRKLKFLEALADGEREIAREVVENDIEIFSEYNPGLVQQAFELV 120

Query: 121 ------SHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMA 180
                 SHRLLSSYKN+K ARKVVM NIK+ + ANPL +GKL+ PPLPTTLQ +YT  MA
Sbjct: 121 QMEDFMSHRLLSSYKNLKEARKVVMANIKRCINANPLFEGKLTLPPLPTTLQRLYTEAMA 180

[Close]

BLAST of ClCG05G016670 vs. ExPASy Swiss-Prot
Match: Q5NBT9 (Protein TPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR1 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFEE ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEKVHAGEWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHR----------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N   ++           
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLKVFSTFNEELYKEITQLLTLENF 124

Query: 126 ----LLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPL 153
                LS Y + K+AR +++  +KK +EANPL + KL FP L
Sbjct: 125 RENEQLSKYGDTKSARSIMLIELKKLIEANPLFREKLVFPTL 166

[Close]

BLAST of ClCG05G016670 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29
Identity = 69/165 (41.82%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTT 156
             +  LS Y + K+AR +++  +KK +EANPL + KL FP L T+
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of ClCG05G016670 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.9e-29
Identity = 68/162 (41.98%), Postives = 99/162 (61.11%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPL 153
             +  LS Y + K+AR +++  +KK +EANPL + KL FP L
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of ClCG05G016670 vs. ExPASy Swiss-Prot
Match: Q0J7U6 (Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR2 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-29
Identity = 66/161 (40.99%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+  +FNM +FE+++    ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGFTKVE 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A E++  D+++F  +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPP 152
             +  LS Y + K+AR +++  +KK +EANPL + KL+FPP
Sbjct: 125 RQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPP 165

[Close]

BLAST of ClCG05G016670 vs. ExPASy Swiss-Prot
Match: Q9LRZ0 (Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-28
Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   E+   LE E+G FFN+ YFEE      ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHR----------- 125
           DN YS KI+F IRK K+LEAL   +R  A E++  D+++F  +N   ++           
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENF 124

Query: 126 ----LLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFP 151
                LS Y + K+AR ++   +KK +EANPL + KL+FP
Sbjct: 125 RENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFP 164

[Close]

BLAST of ClCG05G016670 vs. ExPASy TrEMBL
Match: A0A0A0L5R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652830 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.0e-80
Identity = 154/180 (85.56%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MAT--DPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYL 60
           MAT  DP+R LLFLILQFLD QNLSETARSLECETGLFFNM YFEE+LNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGER +AREVVE DIEIF+QYNPGSH LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120

Query: 121 YKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAARVRPPPPTCRRD 179
           Y+NMK ARKVVMENIKK +EANPLL+GKLSFPPL TTLQA YT  MA+R R PP TCRRD
Sbjct: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSR-PPATCRRD 179

[Close]

BLAST of ClCG05G016670 vs. ExPASy TrEMBL
Match: A0A5D3D8T8 (Protein TPR1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00900 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.6e-79
Identity = 154/180 (85.56%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MAT--DPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYL 60
           MAT  DP+R LLFLILQFLD QNLSETARSLECETGLFFNM YFEE+LNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGER +AREVVE DIEIF+QYNPGSH LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAARVRPPPPTCRRD 179
           YKNMK ARKVVMENIKK +EANPLLQGKLSFPPL TTLQA Y   MA+R R  P TCRRD
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGR-APATCRRD 179

[Close]

BLAST of ClCG05G016670 vs. ExPASy TrEMBL
Match: E5GCC7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.6e-79
Identity = 154/180 (85.56%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MAT--DPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYL 60
           MAT  DP+R LLFLILQFLD QNLSETARSLECETGLFFNM YFEE+LNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGER +AREVVE DIEIF+QYNPGSH LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAARVRPPPPTCRRD 179
           YKNMK ARKVVMENIKK +EANPLLQGKLSFPPL TTLQA Y   MA+R R  P TCRRD
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGR-APATCRRD 179

[Close]

BLAST of ClCG05G016670 vs. ExPASy TrEMBL
Match: A0A6J1CDK2 (protein TPR1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010564 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.6e-79
Identity = 147/185 (79.46%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MATDPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCG 60
           MATDP+RG+LFLIL +LDQQNLSETARSLECETGL+FNM YFEEMLNCCAYNEAESYLCG
Sbjct: 1   MATDPDRGILFLILHYLDQQNLSETARSLECETGLYFNMSYFEEMLNCCAYNEAESYLCG 60

Query: 61  FTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSSYK 120
           FTDIHDN+YSTKIYFGIRKLKFLEAL+DGER IAREVVENDIEIF++YNPGSHRLLSSYK
Sbjct: 61  FTDIHDNLYSTKIYFGIRKLKFLEALADGEREIAREVVENDIEIFSEYNPGSHRLLSSYK 120

Query: 121 NMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAAR-----VRPPPPTC 180
           N+K ARKVVM NIK+ + ANPL +GKL+ PPLPTTLQ +YT  MA R        PP TC
Sbjct: 121 NLKEARKVVMANIKRCINANPLFEGKLTLPPLPTTLQRLYTEAMAGRGFFNGREVPPATC 180

[Close]

BLAST of ClCG05G016670 vs. ExPASy TrEMBL
Match: A0A1S3BVS3 (protein TPR1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.6e-79
Identity = 154/180 (85.56%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MAT--DPNRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYL 60
           MAT  DP+R LLFLILQFLD QNLSETARSLECETGLFFNM YFEE+LNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNPGSHRLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGER +AREVVE DIEIF+QYNPGSH LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTTLQAIYTAVMAARVRPPPPTCRRD 179
           YKNMK ARKVVMENIKK +EANPLLQGKLSFPPL TTLQA Y   MA+R R  P TCRRD
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGR-APATCRRD 179

[Close]

BLAST of ClCG05G016670 vs. TAIR 10
Match: AT1G80490.1 (TOPLESS-related 1 )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 69/165 (41.82%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTT 156
             +  LS Y + K+AR +++  +KK +EANPL + KL FP L T+
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of ClCG05G016670 vs. TAIR 10
Match: AT1G80490.2 (TOPLESS-related 1 )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 69/165 (41.82%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPLPTT 156
             +  LS Y + K+AR +++  +KK +EANPL + KL FP L T+
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of ClCG05G016670 vs. TAIR 10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 68/162 (41.98%), Postives = 99/162 (61.11%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPL 153
             +  LS Y + K+AR +++  +KK +EANPL + KL FP L
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of ClCG05G016670 vs. TAIR 10
Match: AT1G15750.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 68/162 (41.98%), Postives = 99/162 (61.11%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPL 153
             +  LS Y + K+AR +++  +KK +EANPL + KL FP L
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of ClCG05G016670 vs. TAIR 10
Match: AT1G15750.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 68/162 (41.98%), Postives = 99/162 (61.11%), Query Frame = 0


Query: 6   NRGLLFLILQFLDQQNLSETARSLECETGLFFNMGYFEEMLNCCAYNEAESYLCGFTDIH 65
           +R L+FLILQFLD++   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + 
Sbjct: 5   SRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVD 64

Query: 66  DNIYSTKIYFGIRKLKFLEALSDGERGIAREVVENDIEIFNQYNP--------------- 125
           DN YS KI+F IRK K+LEAL   +R  A +++  D+++F+ +N                
Sbjct: 65  DNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124

Query: 126 GSHRLLSSYKNMKAARKVVMENIKKSVEANPLLQGKLSFPPL 153
             +  LS Y + K+AR +++  +KK +EANPL + KL FP L
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

The following BLAST results are available for this feature:

BLAST of ClCG05G016670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896847.1	2.4e-79	83.62	protein TPR1-like [Benincasa hispida]	[more]
XP_008452906.1	1.6e-78	85.56	PREDICTED: protein TPR1-like isoform X2 [Cucumis melo] >ADN34126.1 hypothetical ...	[more]
XP_022139726.1	1.6e-78	79.46	protein TPR1-like isoform X2 [Momordica charantia]	[more]
KAE8649955.1	8.6e-77	78.97	hypothetical protein Csa_012980 [Cucumis sativus]	[more]
XP_022139717.1	1.6e-75	73.50	protein TPR1-like isoform X1 [Momordica charantia]	[more]

BLAST of ClCG05G016670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5NBT9	1.1e-29	42.59	Protein TPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR1 PE=1 SV=1	[more]
Q0WV90	4.1e-29	41.82	Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3	[more]
Q94AI7	6.9e-29	41.98	Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1	[more]
Q0J7U6	9.1e-29	40.99	Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TP...	[more]
Q9LRZ0	2.0e-28	41.88	Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2	[more]

BLAST of ClCG05G016670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5R0	4.0e-80	85.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652830 PE=4 SV=1	[more]
A0A5D3D8T8	7.6e-79	85.56	Protein TPR1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCC7	7.6e-79	85.56	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1CDK2	7.6e-79	79.46	protein TPR1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010564 PE=4...	[more]
A0A1S3BVS3	7.6e-79	85.56	protein TPR1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1	[more]

BLAST of ClCG05G016670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80490.1	2.9e-30	41.82	TOPLESS-related 1	[more]
AT1G80490.2	2.9e-30	41.82	TOPLESS-related 1	[more]
AT1G15750.1	4.9e-30	41.98	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.2	4.9e-30	41.98	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.3	4.9e-30	41.98	Transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 5..37 e-value: 0.009 score: 25.2
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 5..37 score: 9.069893
IPR027728	Topless family	PANTHER	PTHR44083	TOPLESS-RELATED PROTEIN 1-RELATED	coord: 4..152
None	No IPR available	PANTHER	PTHR44083:SF26	1 ENHANCER LOCUS 2 PROTEIN, PUTATIVE-RELATED	coord: 4..152
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 36..93 score: 8.270143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G016670.2	ClCG05G016670.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding