ClCG05G016440 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G016440
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	transcription elongation factor B polypeptide 3
Location	CG_Chr05: 28649987 .. 28650692 (-)
RNA-Seq Expression	ClCG05G016440
Synteny	ClCG05G016440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCAAATAGGTAAAGCAATTTCATCTTTGAATAACGATGCTTGGATTAACGAAGCTAGAGATAGTGTGAGATTTATTGGAGATGTTGGCGAAACCGATTTACAATTTCTAGAGCTTATTTTACCACATTGCACTGTTGACCAATTGATGCACATTGAAAAAAGTTCTAAAGGGTGAGATCTCACTCCAGTAACTTATCAATTGTGGAAAACTTTTTATGAAAGGAAGTTTGGTAAAGATGACGTTGATATTGTAGTCAAGAAGATGCATCACAGGAATGAACCATTTAAATGGATGGATTTTATATGTGGCCAAGATTGAAGAATTAAAAAATAAGGCAAAGACAATTGAAGAACGAATATTACAAGCCTATTAAAAGGAAAAGACCCGAAAGCGAAGTCATCAAATAATATTTTGTGGTGATGAAGATTTATCATCAAGCAACAAGAAGCCAAGATCTAAAAGAACAATTGGATTTGAATGCAATACTACTAAAAGTAAGCTACAAAAGAAGACAAATAGTGAAACACAAATTTGTGAGGTTCCCTCTTCGAGTGATAAGAAACGTAGCTTTGAAAGAGCAATCAGATCTAGACACAATGACAATAAGAGCAAGATACTGAAGAAGGCAAAGAGAGAAGCACTTCAGAGTATAGAGATAAAAAATTTTGTAGCTTTTCAAAGAAATGCAATGCATAAGTAG

mRNA sequence

ATGTTTCAAATAGGTAAAGCAATTTCATCTTTGAATAACGATGCTTGGATTAACGAAGCTAGAGATAGTGTGAGATTTATTGGAGATGTTGGCGAAACCGATTTACAATTTCTAGAGCTTATTTTACCACATTGCACTGTTGACCAATTGATGCACATTGAAAAAAGTTCTAAAGGTCATCAAATAATATTTTGTGGTGATGAAGATTTATCATCAAGCAACAAGAAGCCAAGATCTAAAAGAACAATTGGATTTGAATGCAATACTACTAAAAGTAAGCTACAAAAGAAGACAAATAGTGAAACACAAATTTGTGAGGTTCCCTCTTCGAGTGATAAGAAACGTAGCTTTGAAAGAGCAATCAGATCTAGACACAATGACAATAAGAGCAAGATACTGAAGAAGGCAAAGAGAGAAGCACTTCAGAGTATAGAGATAAAAAATTTTGTAGCTTTTCAAAGAAATGCAATGCATAAGTAG

Coding sequence (CDS)

ATGTTTCAAATAGGTAAAGCAATTTCATCTTTGAATAACGATGCTTGGATTAACGAAGCTAGAGATAGTGTGAGATTTATTGGAGATGTTGGCGAAACCGATTTACAATTTCTAGAGCTTATTTTACCACATTGCACTGTTGACCAATTGATGCACATTGAAAAAAGTTCTAAAGGTCATCAAATAATATTTTGTGGTGATGAAGATTTATCATCAAGCAACAAGAAGCCAAGATCTAAAAGAACAATTGGATTTGAATGCAATACTACTAAAAGTAAGCTACAAAAGAAGACAAATAGTGAAACACAAATTTGTGAGGTTCCCTCTTCGAGTGATAAGAAACGTAGCTTTGAAAGAGCAATCAGATCTAGACACAATGACAATAAGAGCAAGATACTGAAGAAGGCAAAGAGAGAAGCACTTCAGAGTATAGAGATAAAAAATTTTGTAGCTTTTCAAAGAAATGCAATGCATAAGTAG

Protein sequence

MFQIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGHQIIFCGDEDLSSSNKKPRSKRTIGFECNTTKSKLQKKTNSETQICEVPSSSDKKRSFERAIRSRHNDNKSKILKKAKREALQSIEIKNFVAFQRNAMHK

Homology

[Close]

BLAST of ClCG05G016440 vs. NCBI nr
Match: XP_038885873.1 (uncharacterized protein LOC120076176 [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 6.1e-26
Identity = 93/232 (40.09%), Postives = 109/232 (46.98%), Query Frame = 0


Query: 3   QIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKG--- 62
           ++ K  SS  +   INEA DS+RF+GDVG+TDL  LE ILPHCTVDQLMHIE SSKG   
Sbjct: 4   EVSKIASSFLSHDSINEAIDSLRFLGDVGDTDLHVLERILPHCTVDQLMHIENSSKGRDL 63

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 64  TPVTDKLWKNFYEKKFGKNDSDLVIKKMKYKKESFKWKQLYEAKMEALEKKAMEIEARYK 123

Query: 123 ------------HQIIFCGDEDLSSSNKKPRSKRTIGFECNTTKSKLQKKTNSETQICEV 160
                        +IIFC D   SS+NKK RS+ TI  ECNTT+SK+ KK N E Q+C+V
Sbjct: 124 QNCQKENARKQSRKIIFCEDVS-SSNNKKRRSEGTIKSECNTTESKILKKPNREAQMCQV 183

[Close]

BLAST of ClCG05G016440 vs. NCBI nr
Match: XP_038885879.1 (uncharacterized protein LOC120076185 [Benincasa hispida])

HSP 1 Score: 121.3 bits (303), Expect = 7.4e-24
Identity = 89/232 (38.36%), Postives = 108/232 (46.55%), Query Frame = 0


Query: 3   QIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKG--- 62
           ++ K  SS  +   INEA D++RF+ DVG+TDL  L+ ILPHCTVDQL+HIE SSKG   
Sbjct: 4   EVSKIASSFLSHDSINEAIDNLRFLRDVGDTDLHVLKRILPHCTVDQLLHIENSSKGRDL 63

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 64  TLVTDKLWKNFYVKKFGKNDFDLAIERMKYKKESFKWKQLYEAKMEALEKKAMEIEARYK 123

Query: 123 ------------HQIIFCGDEDLSSSNKKPRSKRTIGFECNTTKSKLQKKTNSETQICEV 160
                        +IIFC D   SS+NKK RS+ TI  ECNTT+SK+ KK N E Q+C+V
Sbjct: 124 QNCQKENARKQSRKIIFCEDVS-SSNNKKGRSEGTIKSECNTTESKILKKPNREAQMCQV 183

[Close]

BLAST of ClCG05G016440 vs. NCBI nr
Match: XP_022979571.1 (uncharacterized protein LOC111479252 [Cucurbita maxima])

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-16
Identity = 70/196 (35.71%), Postives = 97/196 (49.49%), Query Frame = 0


Query: 17  INEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGHQII------------- 76
           +N+A DS+RF+GDVG+TDL FLE ILPHCTVDQLMHIE  SKG  +              
Sbjct: 5   VNKAIDSLRFLGDVGQTDLNFLEHILPHCTVDQLMHIENCSKGRDLTPITNKLWKTFYER 64

Query: 77  FCGDEDLSSSNKKPRSKRTIGFE------------------------CNTTK-------- 136
             G +D++    + + K +  ++                        C   K        
Sbjct: 65  KFGKDDVNCVVDRMKHKESFRWKQMYELKIKELEDKAVEVEKRYIRNCQNEKARKQSRQV 124

Query: 137 --------SKLQKKTNSETQICEVPSSSDKKRSFERAIRSRHNDNKSKILKKAKREALQS 160
                   SK+ KK    T++C+V S+++ KRS+            SKILKKA++E LQS
Sbjct: 125 KICEISPSSKVLKKPKVHTKVCQVSSANNNKRSY--------LGGTSKILKKARKETLQS 184

[Close]

BLAST of ClCG05G016440 vs. NCBI nr
Match: XP_038900478.1 (transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] >XP_038900479.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] >XP_038900480.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 95.1 bits (235), Expect = 5.7e-16
Identity = 72/195 (36.92%), Postives = 104/195 (53.33%), Query Frame = 0


Query: 1   MFQIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGH 60
           M+++ K  S +  D  +N+A D++RF+GDVGETD+  L+ ILPHCTVDQLMH+EKSS+G 
Sbjct: 1   MYRVRKIPSLV--DLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGR 60

Query: 61  QII-------------FCGDEDLSSSNKKPRSKRTI------------GFECNTTKS--- 120
            +                G E  ++  ++ R KR                E N +K+   
Sbjct: 61  DLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMKDIEKNESKAADR 120

Query: 121 -------KLQKKTNSETQICEVPSSSDKKRSFERAIRSRHNDN-KSKILKKAKREALQSI 160
                  +  +K + + QIC     S  KRSF  ++   +  N K+KILKKAK E LQS 
Sbjct: 121 IKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGSVYGYNVANTKNKILKKAKIEVLQSQ 180

[Close]

BLAST of ClCG05G016440 vs. NCBI nr
Match: XP_016901950.1 (PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 5.7e-16
Identity = 71/195 (36.41%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 1   MFQIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGH 60
           M+++ K  S +  D  +N+A D++RF+GDVGETD+  LE ILPHCTVDQLMH+EKSS+G 
Sbjct: 1   MYRVRKIPSLV--DLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGR 60

Query: 61  QII-------------FCGDEDLSSSNKKPRSKRTIGFECNTTKSKLQ------------ 120
            +                G E  ++  ++ R KR         ++K+Q            
Sbjct: 61  DLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADR 120

Query: 121 ----------KKTNSETQIC-EVPSSSDKKRSFERAIRSRHNDNKSKILKKAKREALQSI 160
                     +K + + QIC +VP SS+K+            + K+KILKKAK E LQS 
Sbjct: 121 IKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQ 180

[Close]

BLAST of ClCG05G016440 vs. ExPASy TrEMBL
Match: A0A6J1IR58 (uncharacterized protein LOC111479252 OS=Cucurbita maxima OX=3661 GN=LOC111479252 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 7.3e-17
Identity = 70/196 (35.71%), Postives = 97/196 (49.49%), Query Frame = 0


Query: 17  INEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGHQII------------- 76
           +N+A DS+RF+GDVG+TDL FLE ILPHCTVDQLMHIE  SKG  +              
Sbjct: 5   VNKAIDSLRFLGDVGQTDLNFLEHILPHCTVDQLMHIENCSKGRDLTPITNKLWKTFYER 64

Query: 77  FCGDEDLSSSNKKPRSKRTIGFE------------------------CNTTK-------- 136
             G +D++    + + K +  ++                        C   K        
Sbjct: 65  KFGKDDVNCVVDRMKHKESFRWKQMYELKIKELEDKAVEVEKRYIRNCQNEKARKQSRQV 124

Query: 137 --------SKLQKKTNSETQICEVPSSSDKKRSFERAIRSRHNDNKSKILKKAKREALQS 160
                   SK+ KK    T++C+V S+++ KRS+            SKILKKA++E LQS
Sbjct: 125 KICEISPSSKVLKKPKVHTKVCQVSSANNNKRSY--------LGGTSKILKKARKETLQS 184

[Close]

BLAST of ClCG05G016440 vs. ExPASy TrEMBL
Match: A0A5D3BGR1 (Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold203G00180 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.8e-16
Identity = 71/195 (36.41%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 1   MFQIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGH 60
           M+++ K  S +  D  +N+A D++RF+GDVGETD+  LE ILPHCTVDQLMH+EKSS+G 
Sbjct: 1   MYRVRKIPSLV--DLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGR 60

Query: 61  QII-------------FCGDEDLSSSNKKPRSKRTIGFECNTTKSKLQ------------ 120
            +                G E  ++  ++ R KR         ++K+Q            
Sbjct: 61  DLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADR 120

Query: 121 ----------KKTNSETQIC-EVPSSSDKKRSFERAIRSRHNDNKSKILKKAKREALQSI 160
                     +K + + QIC +VP SS+K+            + K+KILKKAK E LQS 
Sbjct: 121 IKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQ 180

[Close]

BLAST of ClCG05G016440 vs. ExPASy TrEMBL
Match: A0A1S4E1U0 (transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496337 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.8e-16
Identity = 71/195 (36.41%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 1   MFQIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGH 60
           M+++ K  S +  D  +N+A D++RF+GDVGETD+  LE ILPHCTVDQLMH+EKSS+G 
Sbjct: 1   MYRVRKIPSLV--DLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGR 60

Query: 61  QII-------------FCGDEDLSSSNKKPRSKRTIGFECNTTKSKLQ------------ 120
            +                G E  ++  ++ R KR         ++K+Q            
Sbjct: 61  DLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADR 120

Query: 121 ----------KKTNSETQIC-EVPSSSDKKRSFERAIRSRHNDNKSKILKKAKREALQSI 160
                     +K + + QIC +VP SS+K+            + K+KILKKAK E LQS 
Sbjct: 121 IKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQ 180

[Close]

BLAST of ClCG05G016440 vs. ExPASy TrEMBL
Match: A0A1S3C4D6 (transcription elongation factor B polypeptide 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496337 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.8e-16
Identity = 71/195 (36.41%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 1   MFQIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKGH 60
           M+++ K  S +  D  +N+A D++RF+GDVGETD+  LE ILPHCTVDQLMH+EKSS+G 
Sbjct: 1   MYRVRKIPSLV--DLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGR 60

Query: 61  QII-------------FCGDEDLSSSNKKPRSKRTIGFECNTTKSKLQ------------ 120
            +                G E  ++  ++ R KR         ++K+Q            
Sbjct: 61  DLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADR 120

Query: 121 ----------KKTNSETQIC-EVPSSSDKKRSFERAIRSRHNDNKSKILKKAKREALQSI 160
                     +K + + QIC +VP SS+K+            + K+KILKKAK E LQS 
Sbjct: 121 IKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQ 180

[Close]

BLAST of ClCG05G016440 vs. ExPASy TrEMBL
Match: A0A0A0KJR8 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511010 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.3e-15
Identity = 64/188 (34.04%), Postives = 84/188 (44.68%), Query Frame = 0


Query: 1   MFQIGKAISSLNNDAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSSKG- 60
           M ++ K I  LN+D  +N+A DSV+F+GDVG+TDL+ LE IL HCT DQL+HIE  SKG 
Sbjct: 1   MSRVSKPIPPLNSD--VNKAIDSVKFLGDVGDTDLRSLESILSHCTADQLLHIENCSKGR 60

Query: 61  ------------------------------------------------------------ 119
                                                                       
Sbjct: 61  DLTPITNKLWKNFYERKFGKDDVDIVVKNETFKWMDLYVAKMKELENRAKKIEDRIIQSY 120

[Close]

BLAST of ClCG05G016440 vs. TAIR 10
Match: AT2G42780.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 56/184 (30.43%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 14  DAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSS-------------KGH 73
           D  + +A D+V++IG VG  D Q LE IL HCT++QL HIE ++             KG 
Sbjct: 15  DLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDATDDTDLSPITDKFWKGF 74

Query: 74  QIIFCGDEDLSSS------NK-----------------KPRSKRTIGFECNTTKSKLQKK 133
                G+ED+         NK                 + + K   G      K + ++K
Sbjct: 75  YKKHYGEEDMKDLIEDLEWNKVNDFKWRNLYELKVIAVQQKEKELGGRLKERYKDENERK 134

Query: 134 TNSETQICEVPSSSDKKRSFERAIRSRHN--DNKSKILKKAKREALQSIEIKNFVAFQRN 160
            + +T++C    +   KR F     S +N    KS I+KKAK + L+S E+KN  A +RN
Sbjct: 135 QSRQTKVCS--KAPPSKRPFWGNSASGYNLGHVKSNIMKKAKIDLLKSQEVKNLTAIKRN 194

[Close]

BLAST of ClCG05G016440 vs. TAIR 10
Match: AT2G42780.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 56/184 (30.43%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 14  DAWINEARDSVRFIGDVGETDLQFLELILPHCTVDQLMHIEKSS-------------KGH 73
           D  + +A D+V++IG VG  D Q LE IL HCT++QL HIE ++             KG 
Sbjct: 15  DLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDATDDTDLSPITDKFWKGF 74

Query: 74  QIIFCGDEDLSSS------NK-----------------KPRSKRTIGFECNTTKSKLQKK 133
                G+ED+         NK                 + + K   G      K + ++K
Sbjct: 75  YKKHYGEEDMKDLIEDLEWNKVNDFKWRNLYELKVIAVQQKEKELGGRLKERYKDENERK 134

Query: 134 TNSETQICEVPSSSDKKRSFERAIRSRHN--DNKSKILKKAKREALQSIEIKNFVAFQRN 160
            + +T++C    +   KR F     S +N    KS I+KKAK + L+S E+KN  A +RN
Sbjct: 135 QSRQTKVCS--KAPPSKRPFWGNSASGYNLGHVKSNIMKKAKIDLLKSQEVKNLTAIKRN 194

The following BLAST results are available for this feature:

BLAST of ClCG05G016440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885873.1	6.1e-26	40.09	uncharacterized protein LOC120076176 [Benincasa hispida]	[more]
XP_038885879.1	7.4e-24	38.36	uncharacterized protein LOC120076185 [Benincasa hispida]	[more]
XP_022979571.1	1.5e-16	35.71	uncharacterized protein LOC111479252 [Cucurbita maxima]	[more]
XP_038900478.1	5.7e-16	36.92	transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispi...	[more]
XP_016901950.1	5.7e-16	36.41	PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis m...	[more]

BLAST of ClCG05G016440 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG05G016440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IR58	7.3e-17	35.71	uncharacterized protein LOC111479252 OS=Cucurbita maxima OX=3661 GN=LOC111479252...	[more]
A0A5D3BGR1	2.8e-16	36.41	Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. ...	[more]
A0A1S4E1U0	2.8e-16	36.41	transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3C4D6	2.8e-16	36.41	transcription elongation factor B polypeptide 3 isoform X1 OS=Cucumis melo OX=36...	[more]
A0A0A0KJR8	2.3e-15	34.04	Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G51...	[more]

BLAST of ClCG05G016440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42780.1	4.2e-09	30.43	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcripti...	[more]
AT2G42780.2	4.2e-09	30.43	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcripti...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.250.3180		coord: 22..101 e-value: 4.4E-6 score: 28.8
None	No IPR available	PANTHER	PTHR47543	OS08G0169600 PROTEIN	coord: 17..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G016440.2	ClCG05G016440.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process