ClCG05G015710 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G015710
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic
Location	CG_Chr05: 27573123 .. 27574595 (+)
RNA-Seq Expression	ClCG05G015710
Synteny	ClCG05G015710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAATACGATAGCATTCGTTTGGTGGAAAAACATCTTCTTATCTACCACACCAAAACACCGAAATCATAGAAACAAAAAGCCGTCAACACCAACAACAGAAACCGTCACCGGAGCAGCAACGAAAACCACCATGGCAGCGGCTGCAGTACCGTCTACCACCACCACCACCGTCCACATTCGTCGGAGTAACTTCCCCTCTCCGACTGCAAAAACCACCGCCATATCTTTCAATCCTATCACTTCCCTCCCAAAGCCGCTCAAGTTCATCATCAGAAACTCCAACGAATTATCGGCGGAGACCGCCACAACAGAGACGACGACTGAGCTGGAGGCAGAAAGCTCACTCGAAGCCTCCGATGAATCGCCGTCTCTGATTTCGGCTCTCAACGTCGAACGAGCCCTCCGTGGAATTCGTAATGTTATCAAACCTAATCTCTCTGCCTATTTTCCAGATTACTCAACTTCGCTCAAATTCCTCTGAAACTTTGTTCTGGTATGCAGCAATTACAGATGTGAATCACTATGGAAGACTCGGACTCCGAAGAGGATGTCCATATGATCAGGTAATTCAATTGAATTTAATCAATTCGCTAAAATGAAAACCCTAATTCCGCGACAATCATCCCTAATCTTGATCGGCCCTAATTCATTACAGGTTCCGATTGCGTACAATATCAAGGTTGAAGAACTAAAGAGCCAGGGATTAGAGGAAGAAGAACTCAACCAAAAACTCGAACTCCTAAAAGTCAGTAGAAACCAAAATTAAAGCCCTAAATTATATTACGAGATTCGAATGTCAGTAATTTTGAAGAATGATTACAGGAATCGTACACGATATTATCATCTGTCGAAGAGAGAAGAATGTACGATTGGAGCTTGGCCAGAATCGGAGAACCAGACAAATATTCATGGCCTTTCGAGGCCGATATAACTCAGATTCAAACTCAATTGCCGCCGCCGAAGGTAATATCCATTTGCCCTCTTTTACTCCACAATCTCACCGCCAGAAATTTGTAAAAACATCTTTGATTTCGGACGAAATGATTTCAGGAACCAGAAGACGAAGGACCGACAAAATTGGTGGGTTACTTCTTCTTGGGTTGGTTCGTTCTGTCGGCCGTGTTATCCATTGCTCTGAATCTCTAGAAACCGCCATTAATGGTGTCTGTAAATTAAGAAGAACACGAGAACGAAGAGCCAGCCAGTTATTTGAAGGAACTTGGAATTTGGTCTCTCTAAAGTGGGCCTTTATAAGATTGAGCCTTGTTAAATGTAAGTTTCATTTGTCCTGAGCCCAAGTTTCAAGCCCATAATGTTGTCTTTATCCATAGCTACCTTTGGAAAAATGATTCTATATAAATAGTTGTTTCTTGATGAATCCTTATGTGCGGGAGATAACTTAAAGTATGAAATTTCGGATTTGTAGCTTCATTTTTACTATAATTGTGAATATAACAATTTTTTTTTT

mRNA sequence

ATGCAAAATACGATAGCATTCGTTTGGTGGAAAAACATCTTCTTATCTACCACACCAAAACACCGAAATCATAGAAACAAAAAGCCGTCAACACCAACAACAGAAACCGTCACCGGAGCAGCAACGAAAACCACCATGGCAGCGGCTGCAGTACCGTCTACCACCACCACCACCGTCCACATTCGTCGGAGTAACTTCCCCTCTCCGACTGCAAAAACCACCGCCATATCTTTCAATCCTATCACTTCCCTCCCAAAGCCGCTCAAGTTCATCATCAGAAACTCCAACGAATTATCGGCGGAGACCGCCACAACAGAGACGACGACTGAGCTGGAGGCAGAAAGCTCACTCGAAGCCTCCGATGAATCGCCGTCTCTGATTTCGGCTCTCAACGTCGAACGAGCCCTCCGTGGAATTCGTAATATTACTCAACTTCGCTCAAATTCCTCTGAAACTTTGTTCTGGTATGCAGCAATTACAGATGTGAATCACTATGGAAGACTCGGACTCCGAAGAGGATGTCCATATGATCAGGTTCCGATTGCGTACAATATCAAGGTTGAAGAACTAAAGAGCCAGGGATTAGAGGAAGAAGAACTCAACCAAAAACTCGAACTCCTAAAAGAATCGTACACGATATTATCATCTGTCGAAGAGAGAAGAATGTACGATTGGAGCTTGGCCAGAATCGGAGAACCAGACAAATATTCATGGCCTTTCGAGGCCGATATAACTCAGATTCAAACTCAATTGCCGCCGCCGAAGGAACCAGAAGACGAAGGACCGACAAAATTGGTGGGTTACTTCTTCTTGGGTTGGTTCGTTCTGTCGGCCGTGTTATCCATTGCTCTGAATCTCTAGAAACCGCCATTAATGGTGTCTGTAAATTAAGAAGAACACGAGAACGAAGAGCCAGCCAGTTATTTGAAGGAACTTGGAATTTGGTCTCTCTAAAGTGGGCCTTTATAAGATTGAGCCTTGTTAAATGTAAGTTTCATTTGTCCTGAGCCCAAGTTTCAAGCCCATAATGTTGTCTTTATCCATAGCTACCTTTGGAAAAATGATTCTATATAAATAGTTGTTTCTTGATGAATCCTTATGTGCGGGAGATAACTTAAAGTATGAAATTTCGGATTTGTAGCTTCATTTTTACTATAATTGTGAATATAACAATTTTTTTTTT

Coding sequence (CDS)

ATGCAAAATACGATAGCATTCGTTTGGTGGAAAAACATCTTCTTATCTACCACACCAAAACACCGAAATCATAGAAACAAAAAGCCGTCAACACCAACAACAGAAACCGTCACCGGAGCAGCAACGAAAACCACCATGGCAGCGGCTGCAGTACCGTCTACCACCACCACCACCGTCCACATTCGTCGGAGTAACTTCCCCTCTCCGACTGCAAAAACCACCGCCATATCTTTCAATCCTATCACTTCCCTCCCAAAGCCGCTCAAGTTCATCATCAGAAACTCCAACGAATTATCGGCGGAGACCGCCACAACAGAGACGACGACTGAGCTGGAGGCAGAAAGCTCACTCGAAGCCTCCGATGAATCGCCGTCTCTGATTTCGGCTCTCAACGTCGAACGAGCCCTCCGTGGAATTCGTAATATTACTCAACTTCGCTCAAATTCCTCTGAAACTTTGTTCTGGTATGCAGCAATTACAGATGTGAATCACTATGGAAGACTCGGACTCCGAAGAGGATGTCCATATGATCAGGTTCCGATTGCGTACAATATCAAGGTTGAAGAACTAAAGAGCCAGGGATTAGAGGAAGAAGAACTCAACCAAAAACTCGAACTCCTAAAAGAATCGTACACGATATTATCATCTGTCGAAGAGAGAAGAATGTACGATTGGAGCTTGGCCAGAATCGGAGAACCAGACAAATATTCATGGCCTTTCGAGGCCGATATAACTCAGATTCAAACTCAATTGCCGCCGCCGAAGGAACCAGAAGACGAAGGACCGACAAAATTGGTGGGTTACTTCTTCTTGGGTTGGTTCGTTCTGTCGGCCGTGTTATCCATTGCTCTGAATCTCTAG

Protein sequence

MQNTIAFVWWKNIFLSTTPKHRNHRNKKPSTPTTETVTGAATKTTMAAAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATTETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHYGRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDWSLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALNL

Homology

[Close]

BLAST of ClCG05G015710 vs. NCBI nr
Match: XP_038898705.1 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Benincasa hispida])

HSP 1 Score: 389.4 bits (999), Expect = 2.6e-104
Identity = 213/242 (88.02%), Postives = 216/242 (89.26%), Query Frame = 0


Query: 46  MAAAAVPS-TTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETAT 105
           MAAAAVPS TTTTT+HIRRSNF SPTAKTTAISFNPITS PKPLKFIIRN NE SAETAT
Sbjct: 1   MAAAAVPSTTTTTTIHIRRSNFLSPTAKTTAISFNPITSHPKPLKFIIRNYNESSAETAT 60

Query: 106 TETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNH 165
           TETTTE EAESSL+ASDESPSLISALNVERALRGI                   ITDVNH
Sbjct: 61  TETTTEPEAESSLKASDESPSLISALNVERALRGI------------------PITDVNH 120

Query: 166 YGRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYD 225
           YGRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESY ILSSVEERRMYD
Sbjct: 121 YGRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYMILSSVEERRMYD 180

Query: 226 WSLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIAL 285
           WSLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLSAVLSIAL
Sbjct: 181 WSLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSAVLSIAL 224

Query: 286 NL 287
           NL
Sbjct: 241 NL 224

[Close]

BLAST of ClCG05G015710 vs. NCBI nr
Match: XP_008452780.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Cucumis melo] >KAA0064535.1 NAD(P)H-quinone oxidoreductase subunit U [Cucumis melo var. makuwa] >TYK20055.1 NAD(P)H-quinone oxidoreductase subunit U [Cucumis melo var. makuwa])

HSP 1 Score: 377.9 bits (969), Expect = 7.9e-101
Identity = 206/241 (85.48%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 46  MAAAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATT 105
           MAAAAVPS  TTTVHIRRSNF SPT+K TAISFNPITS  KPLKFIIRNSNE SAETATT
Sbjct: 1   MAAAAVPS--TTTVHIRRSNFFSPTSKPTAISFNPITSRSKPLKFIIRNSNESSAETATT 60

Query: 106 ETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHY 165
           ET TE+E ESSL+ASDESPSLISALNVERALRGI                   ITDVNHY
Sbjct: 61  ETATEMEEESSLQASDESPSLISALNVERALRGI------------------PITDVNHY 120

Query: 166 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 225
           GRLGLRRGCPYDQVPIAYNIKV+ELKSQGLEEEELNQKLELLKESY ILSSVEERRMYDW
Sbjct: 121 GRLGLRRGCPYDQVPIAYNIKVQELKSQGLEEEELNQKLELLKESYMILSSVEERRMYDW 180

Query: 226 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 285
           SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLS VLSIALN
Sbjct: 181 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSIVLSIALN 221

Query: 286 L 287
           L
Sbjct: 241 L 221

[Close]

BLAST of ClCG05G015710 vs. NCBI nr
Match: XP_011654197.1 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Cucumis sativus] >KGN55375.1 hypothetical protein Csa_012263 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-99
Identity = 206/241 (85.48%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 46  MAAAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATT 105
           MAAAAVPS  TTTVHIRRSNF SPT K T ISFNPITS  KPLKFIIRNSNE SAETATT
Sbjct: 1   MAAAAVPS--TTTVHIRRSNFLSPTTKHTLISFNPITSRSKPLKFIIRNSNESSAETATT 60

Query: 106 ETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHY 165
           ET TE EAESSL+AS ESPSLISALNVERALRGI                   ITDVNHY
Sbjct: 61  ETATEPEAESSLQASGESPSLISALNVERALRGI------------------PITDVNHY 120

Query: 166 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 225
           GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESY ILSSVEERRMYDW
Sbjct: 121 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYMILSSVEERRMYDW 180

Query: 226 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 285
           SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLS VLSIALN
Sbjct: 181 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSIVLSIALN 221

Query: 286 L 287
           L
Sbjct: 241 L 221

[Close]

BLAST of ClCG05G015710 vs. NCBI nr
Match: XP_022151248.1 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Momordica charantia])

HSP 1 Score: 364.0 bits (933), Expect = 1.2e-96
Identity = 196/239 (82.01%), Postives = 202/239 (84.52%), Query Frame = 0


Query: 48  AAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATTET 107
           AAAV STT T VHI RSNF SPT KT AISFNPITSLPKPLKF IRNSN+ SAETA TET
Sbjct: 2   AAAVSSTTATAVHISRSNFLSPTPKTAAISFNPITSLPKPLKFCIRNSNDSSAETAATET 61

Query: 108 TTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHYGR 167
            TE E ESS+EA D +PSLISALNVERALRGI                   ITDVNHYGR
Sbjct: 62  ATEPEQESSIEAPDGAPSLISALNVERALRGI------------------PITDVNHYGR 121

Query: 168 LGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDWSL 227
           LGLRRGCPYDQVPIAYNIKVEELKSQGLE+EELNQKLELLKESYTILSSVEERRMYDWSL
Sbjct: 122 LGLRRGCPYDQVPIAYNIKVEELKSQGLEDEELNQKLELLKESYTILSSVEERRMYDWSL 181

Query: 228 ARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALNL 287
           ARIGEPDKYSWPFEADITQIQTQ+PPPKEPEDEGPT+LVGYF LGWF LS VLSIALNL
Sbjct: 182 ARIGEPDKYSWPFEADITQIQTQMPPPKEPEDEGPTRLVGYFILGWFALSVVLSIALNL 222

[Close]

BLAST of ClCG05G015710 vs. NCBI nr
Match: XP_023524366.1 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363.6 bits (932), Expect = 1.5e-96
Identity = 199/241 (82.57%), Postives = 209/241 (86.72%), Query Frame = 0


Query: 47  AAAAVPSTTTTT-VHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATT 106
           AAAAVPSTT+TT VHIRRSNF SPT+KTTAI FN ITSLPKPLKF IRNSN+ SAET TT
Sbjct: 3   AAAAVPSTTSTTAVHIRRSNFLSPTSKTTAIFFNYITSLPKPLKFSIRNSNDSSAETVTT 62

Query: 107 ETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHY 166
           +T +E E ESSL+ASD S SLISALNVERALRGI                   ITDVNHY
Sbjct: 63  DTASEPEPESSLKASDGSSSLISALNVERALRGI------------------PITDVNHY 122

Query: 167 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 226
           GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW
Sbjct: 123 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 182

Query: 227 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 286
           SL+RIGEP+KY+WPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLS VLSIALN
Sbjct: 183 SLSRIGEPEKYTWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSVVLSIALN 225

[Close]

BLAST of ClCG05G015710 vs. ExPASy Swiss-Prot
Match: Q84VQ4 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhU PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.8e-48
Identity = 113/232 (48.71%), Postives = 145/232 (62.50%), Query Frame = 0


Query: 54  TTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATTETTTELEA 113
           T  + VHI   +       T +  + P  +  + +    RNS+E+SAE A TE  +    
Sbjct: 8   TQPSLVHIPGESVLHHVPSTCSFPWKPTINTKRIICSPARNSSEVSAE-AETEGGSSTAV 67

Query: 114 ESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHYGRLGLRRG 173
           +   EA  ESPSLISALNVERALRG+                   ITDV+HYGRLG+ R 
Sbjct: 68  D---EAPKESPSLISALNVERALRGL------------------PITDVDHYGRLGIFRN 127

Query: 174 CPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDWSLARIGEP 233
           C YDQV I Y  +V+ELK QGL+EE+L  K++L+KESYTILS+VEERRMYDWSLAR  + 
Sbjct: 128 CSYDQVTIGYKERVKELKEQGLDEEQLKTKMDLIKESYTILSTVEERRMYDWSLARSEKA 187

Query: 234 DKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 286
           ++Y WPFE DI +   + PPP+EPED GPT+++GYF   W VL   LS+A N
Sbjct: 188 ERYVWPFEVDIMEPSREEPPPQEPEDVGPTRILGYFIGAWLVLGVALSVAFN 217

[Close]

BLAST of ClCG05G015710 vs. ExPASy TrEMBL
Match: A0A5A7VF89 (NAD(P)H-quinone oxidoreductase subunit U OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001750 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.8e-101
Identity = 206/241 (85.48%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 46  MAAAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATT 105
           MAAAAVPS  TTTVHIRRSNF SPT+K TAISFNPITS  KPLKFIIRNSNE SAETATT
Sbjct: 1   MAAAAVPS--TTTVHIRRSNFFSPTSKPTAISFNPITSRSKPLKFIIRNSNESSAETATT 60

Query: 106 ETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHY 165
           ET TE+E ESSL+ASDESPSLISALNVERALRGI                   ITDVNHY
Sbjct: 61  ETATEMEEESSLQASDESPSLISALNVERALRGI------------------PITDVNHY 120

Query: 166 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 225
           GRLGLRRGCPYDQVPIAYNIKV+ELKSQGLEEEELNQKLELLKESY ILSSVEERRMYDW
Sbjct: 121 GRLGLRRGCPYDQVPIAYNIKVQELKSQGLEEEELNQKLELLKESYMILSSVEERRMYDW 180

Query: 226 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 285
           SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLS VLSIALN
Sbjct: 181 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSIVLSIALN 221

Query: 286 L 287
           L
Sbjct: 241 L 221

[Close]

BLAST of ClCG05G015710 vs. ExPASy TrEMBL
Match: A0A1S3BUP1 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493698 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.8e-101
Identity = 206/241 (85.48%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 46  MAAAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATT 105
           MAAAAVPS  TTTVHIRRSNF SPT+K TAISFNPITS  KPLKFIIRNSNE SAETATT
Sbjct: 1   MAAAAVPS--TTTVHIRRSNFFSPTSKPTAISFNPITSRSKPLKFIIRNSNESSAETATT 60

Query: 106 ETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHY 165
           ET TE+E ESSL+ASDESPSLISALNVERALRGI                   ITDVNHY
Sbjct: 61  ETATEMEEESSLQASDESPSLISALNVERALRGI------------------PITDVNHY 120

Query: 166 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 225
           GRLGLRRGCPYDQVPIAYNIKV+ELKSQGLEEEELNQKLELLKESY ILSSVEERRMYDW
Sbjct: 121 GRLGLRRGCPYDQVPIAYNIKVQELKSQGLEEEELNQKLELLKESYMILSSVEERRMYDW 180

Query: 226 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 285
           SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLS VLSIALN
Sbjct: 181 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSIVLSIALN 221

Query: 286 L 287
           L
Sbjct: 241 L 221

[Close]

BLAST of ClCG05G015710 vs. ExPASy TrEMBL
Match: A0A0A0L072 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G647480 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.5e-100
Identity = 206/241 (85.48%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 46  MAAAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATT 105
           MAAAAVPS  TTTVHIRRSNF SPT K T ISFNPITS  KPLKFIIRNSNE SAETATT
Sbjct: 1   MAAAAVPS--TTTVHIRRSNFLSPTTKHTLISFNPITSRSKPLKFIIRNSNESSAETATT 60

Query: 106 ETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHY 165
           ET TE EAESSL+AS ESPSLISALNVERALRGI                   ITDVNHY
Sbjct: 61  ETATEPEAESSLQASGESPSLISALNVERALRGI------------------PITDVNHY 120

Query: 166 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 225
           GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESY ILSSVEERRMYDW
Sbjct: 121 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYMILSSVEERRMYDW 180

Query: 226 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 285
           SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLS VLSIALN
Sbjct: 181 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSIVLSIALN 221

Query: 286 L 287
           L
Sbjct: 241 L 221

[Close]

BLAST of ClCG05G015710 vs. ExPASy TrEMBL
Match: A0A6J1DBN8 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018934 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.7e-97
Identity = 196/239 (82.01%), Postives = 202/239 (84.52%), Query Frame = 0


Query: 48  AAAVPSTTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATTET 107
           AAAV STT T VHI RSNF SPT KT AISFNPITSLPKPLKF IRNSN+ SAETA TET
Sbjct: 2   AAAVSSTTATAVHISRSNFLSPTPKTAAISFNPITSLPKPLKFCIRNSNDSSAETAATET 61

Query: 108 TTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHYGR 167
            TE E ESS+EA D +PSLISALNVERALRGI                   ITDVNHYGR
Sbjct: 62  ATEPEQESSIEAPDGAPSLISALNVERALRGI------------------PITDVNHYGR 121

Query: 168 LGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDWSL 227
           LGLRRGCPYDQVPIAYNIKVEELKSQGLE+EELNQKLELLKESYTILSSVEERRMYDWSL
Sbjct: 122 LGLRRGCPYDQVPIAYNIKVEELKSQGLEDEELNQKLELLKESYTILSSVEERRMYDWSL 181

Query: 228 ARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALNL 287
           ARIGEPDKYSWPFEADITQIQTQ+PPPKEPEDEGPT+LVGYF LGWF LS VLSIALNL
Sbjct: 182 ARIGEPDKYSWPFEADITQIQTQMPPPKEPEDEGPTRLVGYFILGWFALSVVLSIALNL 222

[Close]

BLAST of ClCG05G015710 vs. ExPASy TrEMBL
Match: A0A6J1IZ95 (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481243 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.8e-96
Identity = 198/241 (82.16%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 47  AAAAVPSTTTTT-VHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATT 106
           AAAAVPSTT+TT VHIRRSNF  PT+KTTAI FN ITSLPKPLKF IRNSN+ SAET TT
Sbjct: 3   AAAAVPSTTSTTVVHIRRSNFLCPTSKTTAIFFNYITSLPKPLKFSIRNSNDSSAETVTT 62

Query: 107 ETTTELEAESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHY 166
           +T +E E ESSL+ASD S SLISALNVERALRGI                   ITDVNHY
Sbjct: 63  DTASEPEPESSLKASDGSSSLISALNVERALRGI------------------PITDVNHY 122

Query: 167 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 226
           GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW
Sbjct: 123 GRLGLRRGCPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDW 182

Query: 227 SLARIGEPDKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 286
           SL+RIGEP+KY+WPFEADITQIQTQLPPPKEPEDEGPT+LVGYFFLGWFVLS VLSIALN
Sbjct: 183 SLSRIGEPEKYTWPFEADITQIQTQLPPPKEPEDEGPTRLVGYFFLGWFVLSVVLSIALN 225

[Close]

BLAST of ClCG05G015710 vs. TAIR 10
Match: AT5G21430.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-49
Identity = 113/232 (48.71%), Postives = 145/232 (62.50%), Query Frame = 0


Query: 54  TTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATTETTTELEA 113
           T  + VHI   +       T +  + P  +  + +    RNS+E+SAE A TE  +    
Sbjct: 8   TQPSLVHIPGESVLHHVPSTCSFPWKPTINTKRIICSPARNSSEVSAE-AETEGGSSTAV 67

Query: 114 ESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHYGRLGLRRG 173
           +   EA  ESPSLISALNVERALRG+                   ITDV+HYGRLG+ R 
Sbjct: 68  D---EAPKESPSLISALNVERALRGL------------------PITDVDHYGRLGIFRN 127

Query: 174 CPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDWSLARIGEP 233
           C YDQV I Y  +V+ELK QGL+EE+L  K++L+KESYTILS+VEERRMYDWSLAR  + 
Sbjct: 128 CSYDQVTIGYKERVKELKEQGLDEEQLKTKMDLIKESYTILSTVEERRMYDWSLARSEKA 187

Query: 234 DKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 286
           ++Y WPFE DI +   + PPP+EPED GPT+++GYF   W VL   LS+A N
Sbjct: 188 ERYVWPFEVDIMEPSREEPPPQEPEDVGPTRILGYFIGAWLVLGVALSVAFN 217

[Close]

BLAST of ClCG05G015710 vs. TAIR 10
Match: AT5G21430.2 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-47
Identity = 112/232 (48.28%), Postives = 144/232 (62.07%), Query Frame = 0


Query: 54  TTTTTVHIRRSNFPSPTAKTTAISFNPITSLPKPLKFIIRNSNELSAETATTETTTELEA 113
           T  + VHI   +       T +  + P  +  + +    RNS+E+SAE A TE  +    
Sbjct: 8   TQPSLVHIPGESVLHHVPSTCSFPWKPTINTKRIICSPARNSSEVSAE-AETEGGSSTAV 67

Query: 114 ESSLEASDESPSLISALNVERALRGIRNITQLRSNSSETLFWYAAITDVNHYGRLGLRRG 173
           +   EA  ESPSLISALNVERALRG+                   ITDV+HYGRLG+ R 
Sbjct: 68  D---EAPKESPSLISALNVERALRGL------------------PITDVDHYGRLGIFRN 127

Query: 174 CPYDQVPIAYNIKVEELKSQGLEEEELNQKLELLKESYTILSSVEERRMYDWSLARIGEP 233
           C YDQV I Y  +V+ELK QGL+EE+L  K++L+K SYTILS+VEERRMYDWSLAR  + 
Sbjct: 128 CSYDQVTIGYKERVKELKEQGLDEEQLKTKMDLIK-SYTILSTVEERRMYDWSLARSEKA 187

Query: 234 DKYSWPFEADITQIQTQLPPPKEPEDEGPTKLVGYFFLGWFVLSAVLSIALN 286
           ++Y WPFE DI +   + PPP+EPED GPT+++GYF   W VL   LS+A N
Sbjct: 188 ERYVWPFEVDIMEPSREEPPPQEPEDVGPTRILGYFIGAWLVLGVALSVAFN 216

The following BLAST results are available for this feature:

BLAST of ClCG05G015710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898705.1	2.6e-104	88.02	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Benincasa hispida]	[more]
XP_008452780.1	7.9e-101	85.48	PREDICTED: NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Cucumis melo...	[more]
XP_011654197.1	1.1e-99	85.48	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Cucumis sativus] >KGN55...	[more]
XP_022151248.1	1.2e-96	82.01	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Momordica charantia]	[more]
XP_023524366.1	1.5e-96	82.57	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Cucurbita pepo subsp. p...	[more]

BLAST of ClCG05G015710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84VQ4	2.8e-48	48.71	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of ClCG05G015710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VF89	3.8e-101	85.48	NAD(P)H-quinone oxidoreductase subunit U OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BUP1	3.8e-101	85.48	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A0A0L072	5.5e-100	85.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G647480 PE=4 SV=1	[more]
A0A6J1DBN8	5.7e-97	82.01	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Momordica charantia O...	[more]
A0A6J1IZ95	2.8e-96	82.16	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Cucurbita maxima OX=3...	[more]

BLAST of ClCG05G015710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21430.1	2.0e-49	48.71	Chaperone DnaJ-domain superfamily protein	[more]
AT5G21430.2	1.4e-47	48.28	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 187..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..122
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 158..235 e-value: 3.5E-5 score: 25.8
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 162..228
IPR044199	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic	PANTHER	PTHR47726	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC	coord: 46..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G015710.1	ClCG05G015710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)