ClCG05G014310 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G014310
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	LRR receptor-like serine/threonine-protein kinase GSO1-like
Location	CG_Chr05: 23880934 .. 23881275 (+)
RNA-Seq Expression	ClCG05G014310
Synteny	ClCG05G014310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACTGTCTACGGCGGGACGGAGAGGCGGCGCAGTGGGCCGGCGAGGAGTGGGATTTTCTCGCGGCGCAGGACGACGATGGTCGGGAAGAGCTTCTCAGCGACAGCAAGAAGAAAAAGTGTTCAACGGCGGAGATGGCGGCGGCGTCGACGACGGCGACGGAGGTGAAGATTAAGATCACGAAGAGGCAGTTGGAGGAGCTTTTGGGGAAGGTGGATGTTAAGGAGATGTCCGTACAACAGGTTCTAGCTCAGTTGATGGGCGTCGGAGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAATTAGATTGA

mRNA sequence

ATGGGCAACTGTCTACGGCGGGACGGAGAGGCGGCGCAGTGGGCCGGCGAGGAGTGGGATTTTCTCGCGGCGCAGGACGACGATGGTCGGGAAGAGCTTCTCAGCGACAGCAAGAAGAAAAAGTGTTCAACGGCGGAGATGGCGGCGGCGTCGACGACGGCGACGGAGGTGAAGATTAAGATCACGAAGAGGCAGTTGGAGGAGCTTTTGGGGAAGGTGGATGTTAAGGAGATGTCCGTACAACAGGTTCTAGCTCAGTTGATGGGCGTCGGAGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAATTAGATTGA

Coding sequence (CDS)

ATGGGCAACTGTCTACGGCGGGACGGAGAGGCGGCGCAGTGGGCCGGCGAGGAGTGGGATTTTCTCGCGGCGCAGGACGACGATGGTCGGGAAGAGCTTCTCAGCGACAGCAAGAAGAAAAAGTGTTCAACGGCGGAGATGGCGGCGGCGTCGACGACGGCGACGGAGGTGAAGATTAAGATCACGAAGAGGCAGTTGGAGGAGCTTTTGGGGAAGGTGGATGTTAAGGAGATGTCCGTACAACAGGTTCTAGCTCAGTTGATGGGCGTCGGAGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAATTAGATTGA

Protein sequence

MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIKITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD

Homology

[Close]

BLAST of ClCG05G014310 vs. NCBI nr
Match: XP_022975730.1 (uncharacterized protein LOC111475920 [Cucurbita maxima])

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNCLRRDG AAQWAGEEWD LAA +DDGRE LL +++KKK        +STTATEVKIK
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDLLAA-EDDGREGLLGENEKKK--------SSTTATEVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITKRQLEELLGKVD+KEMSVQQVLAQL+GVGDQFHESRHRHWRPVLQSIPE+D
Sbjct: 61  ITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

[Close]

BLAST of ClCG05G014310 vs. NCBI nr
Match: XP_022936225.1 (uncharacterized protein LOC111442898 [Cucurbita moschata] >KAG6592042.1 hypothetical protein SDJN03_14388, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024918.1 hypothetical protein SDJN02_13738, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNCLRRDG AAQWAGEEWDFLAA +DDGRE LL + +KKK STA        ATEVKIK
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDFLAA-EDDGREGLLGEIEKKKSSTA--------ATEVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITKRQLEELLGKVD+KEMSVQQVLAQL+GVGDQFHESRHRHWRPVLQSIPE+D
Sbjct: 61  ITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

[Close]

BLAST of ClCG05G014310 vs. NCBI nr
Match: XP_038896531.1 (uncharacterized protein LOC120084782 [Benincasa hispida])

HSP 1 Score: 175.3 bits (443), Expect = 3.1e-40
Identity = 89/113 (78.76%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNCLRRD   AQWAGE+WDFLAA+  DG+E LL D +KKKCS    A ASTTA  VKIK
Sbjct: 1   MGNCLRRDDAVAQWAGEDWDFLAAEGHDGQEGLLRDGEKKKCSA---AVASTTAATVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITKRQLEELLGKVD+KE+SVQQVLAQL+GVGDQFHESRHRHWRPVLQ IPE+D
Sbjct: 61  ITKRQLEELLGKVDIKEISVQQVLAQLIGVGDQFHESRHRHWRPVLQCIPEVD 110

[Close]

BLAST of ClCG05G014310 vs. NCBI nr
Match: XP_023536165.1 (uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39
Identity = 91/113 (80.53%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNC+RRDG AAQWAGEEWDFLAA +DDGRE LL + +KKK STA        ATEVKIK
Sbjct: 1   MGNCIRRDGAAAQWAGEEWDFLAA-EDDGREGLLGEIEKKKSSTA--------ATEVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITKRQLEELLGKVD+KEMSVQQVLAQL+GV DQFHESRHRHWRPVLQSIPE+D
Sbjct: 61  ITKRQLEELLGKVDIKEMSVQQVLAQLIGVDDQFHESRHRHWRPVLQSIPEVD 104

[Close]

BLAST of ClCG05G014310 vs. NCBI nr
Match: XP_022139678.1 (uncharacterized protein LOC111010526 [Momordica charantia])

HSP 1 Score: 137.5 bits (345), Expect = 7.1e-29
Identity = 73/113 (64.60%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNCLRRDG A +WAGEEW FLA +                      AA +  ATEVKIK
Sbjct: 1   MGNCLRRDGAAERWAGEEWGFLAEE-----------------KQGSAAAPTAAATEVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITK+QLEELLGK DVK +SVQQVLAQL+ VGDQFHESRHR WRPVLQSIPE+D
Sbjct: 61  ITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD 96

[Close]

BLAST of ClCG05G014310 vs. ExPASy TrEMBL
Match: A0A6J1IHJ3 (uncharacterized protein LOC111475920 OS=Cucurbita maxima OX=3661 GN=LOC111475920 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.7e-41
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNCLRRDG AAQWAGEEWD LAA +DDGRE LL +++KKK        +STTATEVKIK
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDLLAA-EDDGREGLLGENEKKK--------SSTTATEVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITKRQLEELLGKVD+KEMSVQQVLAQL+GVGDQFHESRHRHWRPVLQSIPE+D
Sbjct: 61  ITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

[Close]

BLAST of ClCG05G014310 vs. ExPASy TrEMBL
Match: A0A6J1FD17 (uncharacterized protein LOC111442898 OS=Cucurbita moschata OX=3662 GN=LOC111442898 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.7e-41
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNCLRRDG AAQWAGEEWDFLAA +DDGRE LL + +KKK STA        ATEVKIK
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDFLAA-EDDGREGLLGEIEKKKSSTA--------ATEVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITKRQLEELLGKVD+KEMSVQQVLAQL+GVGDQFHESRHRHWRPVLQSIPE+D
Sbjct: 61  ITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

[Close]

BLAST of ClCG05G014310 vs. ExPASy TrEMBL
Match: A0A6J1CG88 (uncharacterized protein LOC111010526 OS=Momordica charantia OX=3673 GN=LOC111010526 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.4e-29
Identity = 73/113 (64.60%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKIK 60
           MGNCLRRDG A +WAGEEW FLA +                      AA +  ATEVKIK
Sbjct: 1   MGNCLRRDGAAERWAGEEWGFLAEE-----------------KQGSAAAPTAAATEVKIK 60

Query: 61  ITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           ITK+QLEELLGK DVK +SVQQVLAQL+ VGDQFHESRHR WRPVLQSIPE+D
Sbjct: 61  ITKKQLEELLGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD 96

[Close]

BLAST of ClCG05G014310 vs. ExPASy TrEMBL
Match: A0A5B6U831 (Expression protein OS=Gossypium australe OX=47621 GN=EPI10_009028 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQ--DDDGREELLSDSK-----KKKCSTAEMAAASTT 60
           MGNCLR    + QWAG++W   AA   DDDG  ++ +  K      ++       +++ T
Sbjct: 1   MGNCLRHQ-SSTQWAGDDWGTTAADYGDDDGFSDIKTKGKGIVGDHRQKDGFITTSSTPT 60

Query: 61  ATEVKIKITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
           A EVK+KITK+QLEELLG+VDVKE+SVQQVL+QL+ V +QF E+  R WRP LQSIPE++
Sbjct: 61  AHEVKVKITKKQLEELLGRVDVKELSVQQVLSQLINVSNQFDETNQRSWRPALQSIPEVN 119

[Close]

BLAST of ClCG05G014310 vs. ExPASy TrEMBL
Match: A0A5D2QUV4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G022400v1 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.5e-20
Identity = 61/120 (50.83%), Postives = 80/120 (66.67%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWDFLAAQ--DDDGREELLSDSK-----KKKCSTAEMAAASTT 60
           MGNCLR    + QWAG++W   AA   DDDG  ++ +  K       +       +++ T
Sbjct: 1   MGNCLRHQ-SSTQWAGDDWGTTAADYGDDDGFSDIKTKEKGIVGDHHQKDGFITTSSTPT 60

Query: 61  ATEVKIKITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHESRHRHWRPVLQSIPELD 114
             EVK+KITK+QLEELLG+VDVKE+SVQQVLAQL+ V +QF E+  R WRP LQSIPE++
Sbjct: 61  VHEVKVKITKKQLEELLGRVDVKELSVQQVLAQLINVSNQFDETNQRSWRPALQSIPEVN 119

[Close]

BLAST of ClCG05G014310 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. )

HSP 1 Score: 72.0 bits (175), Expect = 3.4e-13
Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 1   MGNCLRRDGEAAQWAGEEWD-FLAAQDDDGREELLSDSKKKKCSTAEMAAASTTATEVKI 60
           MGNCLR + E   WAGE+WD F+   ++D      +    K       + +S  + E+KI
Sbjct: 1   MGNCLRHESE-MHWAGEDWDEFITEDEEDHHYSSKTTRDGKPVIVTRDSKSSVPSHEIKI 60

Query: 61  KITKRQLEELLGKVDVKEMSVQQVLAQLMGVGDQFHE--SRHRHWRPVLQSIPELD 114
           ++TK+QL +LL KV+V +++ QQ       + ++ +E  ++ R WRPVLQSIPE++
Sbjct: 61  RLTKKQLHDLLSKVNVHDLTFQQQTFSCPILNNRGYEEANQQRLWRPVLQSIPEVN 115

[Close]

BLAST of ClCG05G014310 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.3e-09
Identity = 40/132 (30.30%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 1   MGNCL-RRDGEAAQWAGEE-----------WDFLAAQDDDGREELLSDSKKKKCSTAEMA 60
           MGNC+   +     W+G++              +   D+D  E+LL ++      T+  +
Sbjct: 1   MGNCICVTEKTTTSWSGDDNGSYNKRRRRRRSTVVHDDNDDGEKLLGETSN---VTSTSS 60

Query: 61  AASTTATEVKIKITKRQLEELLGKVDVKEMSVQQVLAQLM-GVGDQFHES------RHRH 114
           ++S+   E+KI+ITK++LE+L+  + +K ++ +++L++L+   GDQ   S       H+ 
Sbjct: 61  SSSSERREIKIRITKKELEDLMRNIGLKSLTAEEILSKLIFEGGDQIGFSAVDVTNHHQP 120

The following BLAST results are available for this feature:

BLAST of ClCG05G014310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975730.1	1.4e-40	81.42	uncharacterized protein LOC111475920 [Cucurbita maxima]	[more]
XP_022936225.1	1.4e-40	82.30	uncharacterized protein LOC111442898 [Cucurbita moschata] >KAG6592042.1 hypothet...	[more]
XP_038896531.1	3.1e-40	78.76	uncharacterized protein LOC120084782 [Benincasa hispida]	[more]
XP_023536165.1	1.5e-39	80.53	uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo]	[more]
XP_022139678.1	7.1e-29	64.60	uncharacterized protein LOC111010526 [Momordica charantia]	[more]

BLAST of ClCG05G014310 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG05G014310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHJ3	6.7e-41	81.42	uncharacterized protein LOC111475920 OS=Cucurbita maxima OX=3661 GN=LOC111475920...	[more]
A0A6J1FD17	6.7e-41	82.30	uncharacterized protein LOC111442898 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]
A0A6J1CG88	3.4e-29	64.60	uncharacterized protein LOC111010526 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5B6U831	2.9e-20	50.83	Expression protein OS=Gossypium australe OX=47621 GN=EPI10_009028 PE=4 SV=1	[more]
A0A5D2QUV4	8.5e-20	50.83	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G022400v1 P...	[more]

BLAST of ClCG05G014310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20340.1	3.4e-13	37.07	Expression of the gene is downregulated in the presence of paraquat, an inducer ...	[more]
AT4G21920.1	2.3e-09	30.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33647	OS01G0793900 PROTEIN	coord: 1..111
None	No IPR available	PANTHER	PTHR33647:SF5	OS01G0793900 PROTEIN	coord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G014310.1	ClCG05G014310.1	mRNA